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The map label for this gene is ruvB [H]

Identifier: 66044658

GI number: 66044658

Start: 1596169

End: 1597230

Strand: Direct

Name: ruvB [H]

Synonym: Psyr_1410

Alternate gene names: 66044658

Gene position: 1596169-1597230 (Clockwise)

Preceding gene: 66044657

Following gene: 66044659

Centisome position: 26.19

GC content: 61.49

Gene sequence:

>1062_bases
GTGATAGACGCCGACCGTCTGATAACTGCCACTGGTGGCCGTGATCGTGATGAACAGATGGACCGCGCGATTCGGCCACT
GAGCCTTGCGGATTACATCGGCCAGCCGACCGTACGCGAGCAGATGGAGTTGTTCATCCAGGCTGCCCGTGGTCGCAGCG
AAGCGCTGGATCACACGCTGATCTTCGGTCCGCCCGGTCTGGGCAAGACCACGCTCGCCAACATCATCGCTCAGGAAATG
GGCGTGTCGATCAAGAGTACGTCCGGCCCGGTCCTCGAGCGGCCCGGCGATCTGGCAGCGATCCTGACCAACCTTGAACC
CAATGACGTGCTGTTCATCGACGAGATCCATCGTCTGTCGCCGATCGTCGAGGAAGTGCTGTACCCGGCAATGGAAGACT
TCCAGCTCGACATCATGATCGGTGAAGGCCCGGCAGCGCGCTCGATCAAGCTTGATCTGCCGCCGTTCACGCTGGTCGGT
GCGACCACTCGAGCCGGCATGCTGACCAATCCGCTGCGCGACCGCTTCGGCATCGTGCAGCGACTCGAGTTTTACAACAT
CGCCGATCTTTCCACGATCGTGTCGCGCTCGGCAGGCATTCTGGGGTTGGTCATCGAGCCGCAAGGCGCTTTCGAGATCG
CCAGGCGCGCCCGTGGCACGCCGCGTATCGCCAACCGCCTGTTGCGTCGGGTGCGGGATTTTGCCGAAGTTCGTGGCAAC
GGGCAGATCACCCGGCAGACAGCCGACAAGGCCCTAAACCTGCTGGACGTCGACGAGCACGGCTTCGATCATCAGGACCG
GCGTTTGCTGCTGACCATGATCGAGAAGTTCGACGGTGGTCCGGTGGGCGTGGACAGCCTGGCGGCGGCCATCAGCGAAG
AGCGTCATACGATCGAAGACGTACTCGAGCCCTATTTGATCCAGCAAGGCTATATCATGCGCACACCTCGGGGGCGTGTG
GTGACCCGGCATGCGTATCTGCATTTCGGCCTGAATATCCCGTCGAGGATGGGCGAGATACCGGTACCGGACGATTTCGG
CGACGAGCCCGTGGATTTATAG

Upstream 100 bases:

>100_bases
CTACAAACCTCAGGAGGCGAGCAAGGCTGTCTCCGCCATCAAGGAAAAAGATTTGAGCAGTGCGGATCTGATTCGCCGTG
CGTTGAAGGGGATGGGTTAA

Downstream 100 bases:

>100_bases
CAATGGCTTGCAATTTATTTGCGGTCTCTGTGGTCACATTGCCAGTCCTGCCGCCGATACCAGTAACTAAGTGGCAAATC
GTTGAAAAACAGTTGCCTGA

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MIDADRLITATGGRDRDEQMDRAIRPLSLADYIGQPTVREQMELFIQAARGRSEALDHTLIFGPPGLGKTTLANIIAQEM
GVSIKSTSGPVLERPGDLAAILTNLEPNDVLFIDEIHRLSPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVG
ATTRAGMLTNPLRDRFGIVQRLEFYNIADLSTIVSRSAGILGLVIEPQGAFEIARRARGTPRIANRLLRRVRDFAEVRGN
GQITRQTADKALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPYLIQQGYIMRTPRGRV
VTRHAYLHFGLNIPSRMGEIPVPDDFGDEPVDL

Sequences:

>Translated_353_residues
MIDADRLITATGGRDRDEQMDRAIRPLSLADYIGQPTVREQMELFIQAARGRSEALDHTLIFGPPGLGKTTLANIIAQEM
GVSIKSTSGPVLERPGDLAAILTNLEPNDVLFIDEIHRLSPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVG
ATTRAGMLTNPLRDRFGIVQRLEFYNIADLSTIVSRSAGILGLVIEPQGAFEIARRARGTPRIANRLLRRVRDFAEVRGN
GQITRQTADKALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPYLIQQGYIMRTPRGRV
VTRHAYLHFGLNIPSRMGEIPVPDDFGDEPVDL
>Mature_353_residues
MIDADRLITATGGRDRDEQMDRAIRPLSLADYIGQPTVREQMELFIQAARGRSEALDHTLIFGPPGLGKTTLANIIAQEM
GVSIKSTSGPVLERPGDLAAILTNLEPNDVLFIDEIHRLSPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVG
ATTRAGMLTNPLRDRFGIVQRLEFYNIADLSTIVSRSAGILGLVIEPQGAFEIARRARGTPRIANRLLRRVRDFAEVRGN
GQITRQTADKALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPYLIQQGYIMRTPRGRV
VTRHAYLHFGLNIPSRMGEIPVPDDFGDEPVDL

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=334, Percent_Identity=71.8562874251497, Blast_Score=483, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 39115; Mature: 39115

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDADRLITATGGRDRDEQMDRAIRPLSLADYIGQPTVREQMELFIQAARGRSEALDHTL
CCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCEE
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAAILTNLEPNDVLFIDEIHRLS
EECCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEHEECCCCCCEEEHHHHHHHH
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
HHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCHHCCHHHHHHHHHHHHHH
RLEFYNIADLSTIVSRSAGILGLVIEPQGAFEIARRARGTPRIANRLLRRVRDFAEVRGN
HHHHCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
GQITRQTADKALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED
CCEEHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRMGEIPVPDDFGDEPVDL
HHHHHHHCCCEEEECCCCCEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDADRLITATGGRDRDEQMDRAIRPLSLADYIGQPTVREQMELFIQAARGRSEALDHTL
CCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCEE
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAAILTNLEPNDVLFIDEIHRLS
EECCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEHEECCCCCCEEEHHHHHHHH
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
HHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCHHCCHHHHHHHHHHHHHH
RLEFYNIADLSTIVSRSAGILGLVIEPQGAFEIARRARGTPRIANRLLRRVRDFAEVRGN
HHHHCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
GQITRQTADKALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED
CCEEHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRMGEIPVPDDFGDEPVDL
HHHHHHHCCCEEEECCCCCEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA