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The map label for this gene is 66044643

Identifier: 66044643

GI number: 66044643

Start: 1577656

End: 1578990

Strand: Reverse

Name: 66044643

Synonym: Psyr_1395

Alternate gene names: NA

Gene position: 1578990-1577656 (Counterclockwise)

Preceding gene: 66044644

Following gene: 66044641

Centisome position: 25.91

GC content: 62.17

Gene sequence:

>1335_bases
ATGATTCGACGCTCCTGGCGCCTTTTGCTCGCAGCTCTGGTAATTGTTCTTTTAATCGTAGCGCTGGGGGTCTGGGTCTG
GACCCGCCCCGCTCCGCCCGCATCACTGGAACACTCGAACCTTGACGGGGGCGCGCCGCTGACCAGCGTAACGCCGGCCA
CCAGCATCAAGACCCGTATCGCACTGGCCGTTACTGCTGAAGACATGCTGAGCGACAAGCAATTGCTGGCGATCAGCAAG
GATGCGTCGGCACGCATCATTCAGGTGGTGCTGCCCAAGGACGACTGCGTCCTGCAACAGAAGACCTTTCAGGACGCTCT
GACGAAGCTCGACGGCCCGGCAAAGGTCGTCGGTGGCATAGGCCCGGGCGCAACCCTGGCCTGGCGCTGGCTGGCCGGGC
AGACCGATGACCAGGCGCAGGCCATTTCCGTAGGTTTTGCGCTCGAGCACGTGTCTAACCCGCCGCCCGTTGTGGAGGAG
GACGAAAAGCCGCCGCAGATCTGCGACGTGCCGCTGCCGCAGAAGGCTGCGCACGGTCACTGGCTGGCCGCATGGAACGA
CGCGCCGGATGATCCGAGCGCAGCCTTCGTGCGCGATCAGAGCAACGCCGACACCAGCATCAGCGACTACGACATCCCGT
TGCCTCAGGTGCTCAATACCGAACTTCGTCATCTGTTGCTCGGCGAGAATGACAGTGGCGGACTGGGCATACCGACGGTC
GAAGTTCCGGCCAGCCAGCCTTCCGACACCGTGACGCTGTTCATGTCCGGTGACGGCGGATGGCGCGACCTGGACAAGGT
CGTGGCCGGCGACATGGCCAAGATGGGCTACCCGGTGGTGGGCATCGACGTACTGCGCTACTACTGGGAACACAAGACGC
CGGAACAGACCGCCGTCGACCTCACCGACCTGATGAACCACTACCGTCAGAAGTGGGGCACCAAGCGCTTCATTCTGGCG
GGCTACTCGTTCGGTGCTGACGTCATGCCGGCTATCTACAATCGCCTGGCAGCAGACGATCAGAATCGGGTCGATGCGAT
CATTCTGCTGGCCTTCGCGCGCACTGGCAGCTTCGAGATTCACGTCGACGGCTGGCTTGGCAACGCAGGCAAGGAAGCCA
CCACCGGACAGGAAATGGCCAAGCTGCCAGCCGCCAAGGTGTTCTGCGTTTACGGCGTCGAAGAGAAGAAAGACAGCGGT
TGCACTGACACCACCGCCGTCGGCGAAGCGGTTCAGTTGCCAGGCGGTCATCACTTCGATGAGAACTATCCGGCGCTGGC
CAAACGCCTGATCGACGCGATCAACAAGCGTCAGGGCAAGACTGCCGCTCAGTAA

Upstream 100 bases:

>100_bases
CTCGTTATATGGCCGTGCCTGCCGGACTCGATCCGCTTGTGGCACTGGCTGACACCGCCGCCCTGATTGCGGGCGGCCTG
ACTGGATTGGTGAAACGCTG

Downstream 100 bases:

>100_bases
CGCCACAGTCTGCGACAAAAAAATCCCGGCACCGTGAGGTGGCCGGGATTTTTTTATCTGCGCTGCCGGACAGCCCGGCC
AACGTTTACATCTCCACTTG

Product: virulence

Products: NA

Alternate protein names: Virulence Protein; Acid lerance Protein; Type IV Secretion System VirJ-Like Protein; AcvB-Related Protein; Acid Virulence Protein B; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component-Like Protein; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MIRRSWRLLLAALVIVLLIVALGVWVWTRPAPPASLEHSNLDGGAPLTSVTPATSIKTRIALAVTAEDMLSDKQLLAISK
DASARIIQVVLPKDDCVLQQKTFQDALTKLDGPAKVVGGIGPGATLAWRWLAGQTDDQAQAISVGFALEHVSNPPPVVEE
DEKPPQICDVPLPQKAAHGHWLAAWNDAPDDPSAAFVRDQSNADTSISDYDIPLPQVLNTELRHLLLGENDSGGLGIPTV
EVPASQPSDTVTLFMSGDGGWRDLDKVVAGDMAKMGYPVVGIDVLRYYWEHKTPEQTAVDLTDLMNHYRQKWGTKRFILA
GYSFGADVMPAIYNRLAADDQNRVDAIILLAFARTGSFEIHVDGWLGNAGKEATTGQEMAKLPAAKVFCVYGVEEKKDSG
CTDTTAVGEAVQLPGGHHFDENYPALAKRLIDAINKRQGKTAAQ

Sequences:

>Translated_444_residues
MIRRSWRLLLAALVIVLLIVALGVWVWTRPAPPASLEHSNLDGGAPLTSVTPATSIKTRIALAVTAEDMLSDKQLLAISK
DASARIIQVVLPKDDCVLQQKTFQDALTKLDGPAKVVGGIGPGATLAWRWLAGQTDDQAQAISVGFALEHVSNPPPVVEE
DEKPPQICDVPLPQKAAHGHWLAAWNDAPDDPSAAFVRDQSNADTSISDYDIPLPQVLNTELRHLLLGENDSGGLGIPTV
EVPASQPSDTVTLFMSGDGGWRDLDKVVAGDMAKMGYPVVGIDVLRYYWEHKTPEQTAVDLTDLMNHYRQKWGTKRFILA
GYSFGADVMPAIYNRLAADDQNRVDAIILLAFARTGSFEIHVDGWLGNAGKEATTGQEMAKLPAAKVFCVYGVEEKKDSG
CTDTTAVGEAVQLPGGHHFDENYPALAKRLIDAINKRQGKTAAQ
>Mature_444_residues
MIRRSWRLLLAALVIVLLIVALGVWVWTRPAPPASLEHSNLDGGAPLTSVTPATSIKTRIALAVTAEDMLSDKQLLAISK
DASARIIQVVLPKDDCVLQQKTFQDALTKLDGPAKVVGGIGPGATLAWRWLAGQTDDQAQAISVGFALEHVSNPPPVVEE
DEKPPQICDVPLPQKAAHGHWLAAWNDAPDDPSAAFVRDQSNADTSISDYDIPLPQVLNTELRHLLLGENDSGGLGIPTV
EVPASQPSDTVTLFMSGDGGWRDLDKVVAGDMAKMGYPVVGIDVLRYYWEHKTPEQTAVDLTDLMNHYRQKWGTKRFILA
GYSFGADVMPAIYNRLAADDQNRVDAIILLAFARTGSFEIHVDGWLGNAGKEATTGQEMAKLPAAKVFCVYGVEEKKDSG
CTDTTAVGEAVQLPGGHHFDENYPALAKRLIDAINKRQGKTAAQ

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47964; Mature: 47964

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRSWRLLLAALVIVLLIVALGVWVWTRPAPPASLEHSNLDGGAPLTSVTPATSIKTRI
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEE
ALAVTAEDMLSDKQLLAISKDASARIIQVVLPKDDCVLQQKTFQDALTKLDGPAKVVGGI
EEEEEHHHHHCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHEECCC
GPGATLAWRWLAGQTDDQAQAISVGFALEHVSNPPPVVEEDEKPPQICDVPLPQKAAHGH
CCCHHEEEEEECCCCCCCHHHEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WLAAWNDAPDDPSAAFVRDQSNADTSISDYDIPLPQVLNTELRHLLLGENDSGGLGIPTV
EEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCEE
EVPASQPSDTVTLFMSGDGGWRDLDKVVAGDMAKMGYPVVGIDVLRYYWEHKTPEQTAVD
ECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHH
LTDLMNHYRQKWGTKRFILAGYSFGADVMPAIYNRLAADDQNRVDAIILLAFARTGSFEI
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEE
HVDGWLGNAGKEATTGQEMAKLPAAKVFCVYGVEEKKDSGCTDTTAVGEAVQLPGGHHFD
EEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCEEECCCCCCCC
ENYPALAKRLIDAINKRQGKTAAQ
CCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIRRSWRLLLAALVIVLLIVALGVWVWTRPAPPASLEHSNLDGGAPLTSVTPATSIKTRI
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEE
ALAVTAEDMLSDKQLLAISKDASARIIQVVLPKDDCVLQQKTFQDALTKLDGPAKVVGGI
EEEEEHHHHHCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHEECCC
GPGATLAWRWLAGQTDDQAQAISVGFALEHVSNPPPVVEEDEKPPQICDVPLPQKAAHGH
CCCHHEEEEEECCCCCCCHHHEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WLAAWNDAPDDPSAAFVRDQSNADTSISDYDIPLPQVLNTELRHLLLGENDSGGLGIPTV
EEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCEE
EVPASQPSDTVTLFMSGDGGWRDLDKVVAGDMAKMGYPVVGIDVLRYYWEHKTPEQTAVD
ECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHH
LTDLMNHYRQKWGTKRFILAGYSFGADVMPAIYNRLAADDQNRVDAIILLAFARTGSFEI
HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEE
HVDGWLGNAGKEATTGQEMAKLPAAKVFCVYGVEEKKDSGCTDTTAVGEAVQLPGGHHFD
EEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCEEECCCCCCCC
ENYPALAKRLIDAINKRQGKTAAQ
CCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA