| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is kup [H]
Identifier: 66044642
GI number: 66044642
Start: 1575675
End: 1577570
Strand: Direct
Name: kup [H]
Synonym: Psyr_1394
Alternate gene names: 66044642
Gene position: 1575675-1577570 (Clockwise)
Preceding gene: 66044635
Following gene: 66044645
Centisome position: 25.86
GC content: 61.29
Gene sequence:
>1896_bases ATGAGTCAAGCAAACAGTCATGCGGAGGCCGGAGGCGCTGCCAAGCCCATCGGGCTGCTGATCGCCGCGGTAGGGGTGGT TTACGGCGACATCGGCACCAGTCCGCTGTACACCCTCAAGGAGGTGTTTCAGGGTGGTTACGGTGTGGACGTGACCCATG ACGCGATTCTCGGCGTGCTGTCGCTGATCTTCTGGTCGCTGATCTGGGTGGTTTCGTTCAAGTACATGGCGTTCGTCCTG CGTGCCGATAACCAGGGTGAGGGCGGCATCATGGCGCTGATGGCCCTGGCGCGGCGCGCTTCGGCCAAGCATCCCCGGCT GCAAATGATGATGGTGGTATTCGGCCTGTTCGGCGCCGCATTGTTCTACGGTGACAGCATGATCACCCCGGCGGTTTCGG TGTTGTCGGCGATGGAAGGGCTGGAGCTGGCGTTCGATGGCCTCGATCACTGGATCGTGCCCATGGCGCTGATTGTGCTG GTGGGGCTGTTTCTGATTCAGCGTCATGGCACCGCGCGTATCGGTGTGCTGTTCGGCCCGGTCATGGTGACCTGGTTTCT GGTGCTCGGTGCGCTGGGGGTCTACGGCATCATGCAGTCGCCGGAAGTGCTGAAAGCGGTCAACCCGGCATGGGGCGTGA ATTTCTTCATTATCCATCCGGGCATTGGCGTGGCCATTCTGGGTGCTGTGGTACTTGCCCTGACCGGTGCCGAGGCGCTG TATGCCGACATGGGCCACTTCGGTCGCAAGCCGATTTCACGCGCGTGGTTCATCCTTGTGCTGCCTGCGCTGCTGCTCAA CTATTTCGGTCAGGGTGCGCTGGTGCTGGGCAATCCTGAAACGGTTCGTAACCCGTTCTACCTGCTGGCGCCGGGCTGGG CGTTGCTGCCACTGATCGGCCTGTCGACGATGGCGACCATCATTGCCTCGCAAGCGGTGATCTCCGGCGCCTTCTCGATG ACGCTGCAGGCGATCCAGCTGGGCTACATTCCGCGCATGCACATCCAGCACACCTCCAGCGACGCGCAAGGCCAGATCTA CATTGGTGCCGTCAACTGGGCGCTGATGGCGGGTGTCATTCTGCTGGTGATCGGCTTCGAATCGTCTGGCGCGCTGGCGT CTGCCTACGGCGTCGCGGTGACCGGGACCATGCTCTGCACCACCATTCTGGTGTCGACGGTCATGCTGATGCTCTGGAAA TGGCCGCCATTGCTGGCTGTTCCGTTGCTGATCTGCCTGCTGCTGGTGGACGGTCTGTTCTTCGCGGCCAACGTGCCGAA GATCTTCCAGGGCGGGGCCTTCCCGGTACTGGCGGGCGCGGTGTTGTTTATCCTCATGACCACCTGGAAGCGCGGCAAGC AGTTGCTCGCGGAGCGAATCGACGAGGGCGGCCTGCCATTGCCGATCTTCATCGGCAGCATTCGCGTCCAGCCGCCGCAC CGGGTACAGGGCACGGCAGTGTTCCTGACTGCACGTTCGGATGCCGTGCCCCATGCGTTGCTGCATAACATGCTGCACAA CCAGGTGTTGCACGAGCAAGTGGTGCTGTTGACGGTGGTGTATGAAGATTCGCCGCGTGTGCCGTCCGCTCAGCGCTTCG AAGTCGAATCCTATGGCGAAGGCTTCTATCGGGTGATCCTGCACTTCGGCTTTATCGATGAGCCTGACGTGCCGGCTGCG CTGGCCTTGTGTCACTTGCCGGAGCTGGACTTCAGTCCGATGCGCACCACGTACTTCCTCAGCCGCGAGACCGTGATCCC GTCCAAGATGGATGGCATGGCTCGCTGGCGTGAAGCGTTGTTCGCCTTCATGCTCAAGAACGCCAACGGCAACCTGCGCT TCTTCAAGCTGCCATTCAACCGGGTGATCGAGTTAGGTACCCAAGTGGAGATGTAA
Upstream 100 bases:
>100_bases CCATCGCGCCGAGGCATGTCAATGTCTGGCTGAATCTGAATTGTTACGCCTTGTGATGTTCTCAGTGTTGAACCTCATGT CTGGTTTCCGGGAGTAGTGG
Downstream 100 bases:
>100_bases ACGTTGGCCGGGCTGTCCGGCAGCGCAGATAAAAAAATCCCGGCCACCTCACGGTGCCGGGATTTTTTTGTCGCAGACTG TGGCGTTACTGAGCGGCAGT
Product: K+ potassium transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MSQANSHAEAGGAAKPIGLLIAAVGVVYGDIGTSPLYTLKEVFQGGYGVDVTHDAILGVLSLIFWSLIWVVSFKYMAFVL RADNQGEGGIMALMALARRASAKHPRLQMMMVVFGLFGAALFYGDSMITPAVSVLSAMEGLELAFDGLDHWIVPMALIVL VGLFLIQRHGTARIGVLFGPVMVTWFLVLGALGVYGIMQSPEVLKAVNPAWGVNFFIIHPGIGVAILGAVVLALTGAEAL YADMGHFGRKPISRAWFILVLPALLLNYFGQGALVLGNPETVRNPFYLLAPGWALLPLIGLSTMATIIASQAVISGAFSM TLQAIQLGYIPRMHIQHTSSDAQGQIYIGAVNWALMAGVILLVIGFESSGALASAYGVAVTGTMLCTTILVSTVMLMLWK WPPLLAVPLLICLLLVDGLFFAANVPKIFQGGAFPVLAGAVLFILMTTWKRGKQLLAERIDEGGLPLPIFIGSIRVQPPH RVQGTAVFLTARSDAVPHALLHNMLHNQVLHEQVVLLTVVYEDSPRVPSAQRFEVESYGEGFYRVILHFGFIDEPDVPAA LALCHLPELDFSPMRTTYFLSRETVIPSKMDGMARWREALFAFMLKNANGNLRFFKLPFNRVIELGTQVEM
Sequences:
>Translated_631_residues MSQANSHAEAGGAAKPIGLLIAAVGVVYGDIGTSPLYTLKEVFQGGYGVDVTHDAILGVLSLIFWSLIWVVSFKYMAFVL RADNQGEGGIMALMALARRASAKHPRLQMMMVVFGLFGAALFYGDSMITPAVSVLSAMEGLELAFDGLDHWIVPMALIVL VGLFLIQRHGTARIGVLFGPVMVTWFLVLGALGVYGIMQSPEVLKAVNPAWGVNFFIIHPGIGVAILGAVVLALTGAEAL YADMGHFGRKPISRAWFILVLPALLLNYFGQGALVLGNPETVRNPFYLLAPGWALLPLIGLSTMATIIASQAVISGAFSM TLQAIQLGYIPRMHIQHTSSDAQGQIYIGAVNWALMAGVILLVIGFESSGALASAYGVAVTGTMLCTTILVSTVMLMLWK WPPLLAVPLLICLLLVDGLFFAANVPKIFQGGAFPVLAGAVLFILMTTWKRGKQLLAERIDEGGLPLPIFIGSIRVQPPH RVQGTAVFLTARSDAVPHALLHNMLHNQVLHEQVVLLTVVYEDSPRVPSAQRFEVESYGEGFYRVILHFGFIDEPDVPAA LALCHLPELDFSPMRTTYFLSRETVIPSKMDGMARWREALFAFMLKNANGNLRFFKLPFNRVIELGTQVEM >Mature_630_residues SQANSHAEAGGAAKPIGLLIAAVGVVYGDIGTSPLYTLKEVFQGGYGVDVTHDAILGVLSLIFWSLIWVVSFKYMAFVLR ADNQGEGGIMALMALARRASAKHPRLQMMMVVFGLFGAALFYGDSMITPAVSVLSAMEGLELAFDGLDHWIVPMALIVLV GLFLIQRHGTARIGVLFGPVMVTWFLVLGALGVYGIMQSPEVLKAVNPAWGVNFFIIHPGIGVAILGAVVLALTGAEALY ADMGHFGRKPISRAWFILVLPALLLNYFGQGALVLGNPETVRNPFYLLAPGWALLPLIGLSTMATIIASQAVISGAFSMT LQAIQLGYIPRMHIQHTSSDAQGQIYIGAVNWALMAGVILLVIGFESSGALASAYGVAVTGTMLCTTILVSTVMLMLWKW PPLLAVPLLICLLLVDGLFFAANVPKIFQGGAFPVLAGAVLFILMTTWKRGKQLLAERIDEGGLPLPIFIGSIRVQPPHR VQGTAVFLTARSDAVPHALLHNMLHNQVLHEQVVLLTVVYEDSPRVPSAQRFEVESYGEGFYRVILHFGFIDEPDVPAAL ALCHLPELDFSPMRTTYFLSRETVIPSKMDGMARWREALFAFMLKNANGNLRFFKLPFNRVIELGTQVEM
Specific function: Transport of potassium into the cell [H]
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family [H]
Homologues:
Organism=Escherichia coli, GI48994960, Length=614, Percent_Identity=51.1400651465798, Blast_Score=624, Evalue=1e-180,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003855 - InterPro: IPR023051 [H]
Pfam domain/function: PF02705 K_trans [H]
EC number: NA
Molecular weight: Translated: 68372; Mature: 68241
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQANSHAEAGGAAKPIGLLIAAVGVVYGDIGTSPLYTLKEVFQGGYGVDVTHDAILGVL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH SLIFWSLIWVVSFKYMAFVLRADNQGEGGIMALMALARRASAKHPRLQMMMVVFGLFGAA HHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LFYGDSMITPAVSVLSAMEGLELAFDGLDHWIVPMALIVLVGLFLIQRHGTARIGVLFGP HHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH VMVTWFLVLGALGVYGIMQSPEVLKAVNPAWGVNFFIIHPGIGVAILGAVVLALTGAEAL HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHH YADMGHFGRKPISRAWFILVLPALLLNYFGQGALVLGNPETVRNPFYLLAPGWALLPLIG HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCEEEECCCHHHHHHHH LSTMATIIASQAVISGAFSMTLQAIQLGYIPRMHIQHTSSDAQGQIYIGAVNWALMAGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHH LLVIGFESSGALASAYGVAVTGTMLCTTILVSTVMLMLWKWPPLLAVPLLICLLLVDGLF HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FAANVPKIFQGGAFPVLAGAVLFILMTTWKRGKQLLAERIDEGGLPLPIFIGSIRVQPPH HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC RVQGTAVFLTARSDAVPHALLHNMLHNQVLHEQVVLLTVVYEDSPRVPSAQRFEVESYGE CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEHHHHCC GFYRVILHFGFIDEPDVPAALALCHLPELDFSPMRTTYFLSRETVIPSKMDGMARWREAL HHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH FAFMLKNANGNLRFFKLPFNRVIELGTQVEM HHHHHHCCCCCEEEEECCHHHHHHHCCCCCC >Mature Secondary Structure SQANSHAEAGGAAKPIGLLIAAVGVVYGDIGTSPLYTLKEVFQGGYGVDVTHDAILGVL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH SLIFWSLIWVVSFKYMAFVLRADNQGEGGIMALMALARRASAKHPRLQMMMVVFGLFGAA HHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LFYGDSMITPAVSVLSAMEGLELAFDGLDHWIVPMALIVLVGLFLIQRHGTARIGVLFGP HHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH VMVTWFLVLGALGVYGIMQSPEVLKAVNPAWGVNFFIIHPGIGVAILGAVVLALTGAEAL HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHH YADMGHFGRKPISRAWFILVLPALLLNYFGQGALVLGNPETVRNPFYLLAPGWALLPLIG HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCEEEECCCHHHHHHHH LSTMATIIASQAVISGAFSMTLQAIQLGYIPRMHIQHTSSDAQGQIYIGAVNWALMAGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHH LLVIGFESSGALASAYGVAVTGTMLCTTILVSTVMLMLWKWPPLLAVPLLICLLLVDGLF HHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FAANVPKIFQGGAFPVLAGAVLFILMTTWKRGKQLLAERIDEGGLPLPIFIGSIRVQPPH HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC RVQGTAVFLTARSDAVPHALLHNMLHNQVLHEQVVLLTVVYEDSPRVPSAQRFEVESYGE CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEHHHHCC GFYRVILHFGFIDEPDVPAALALCHLPELDFSPMRTTYFLSRETVIPSKMDGMARWREAL HHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH FAFMLKNANGNLRFFKLPFNRVIELGTQVEM HHHHHHCCCCCEEEEECCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA