| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is dgkA [H]
Identifier: 66044633
GI number: 66044633
Start: 1567695
End: 1568060
Strand: Direct
Name: dgkA [H]
Synonym: Psyr_1385
Alternate gene names: 66044633
Gene position: 1567695-1568060 (Clockwise)
Preceding gene: 66044632
Following gene: 66044635
Centisome position: 25.73
GC content: 59.02
Gene sequence:
>366_bases ATGTCGCCCTTCAAAGGCCAAACCGGTCTGAAACGTATTCTTAATGCCGCGGGTTATTCACTGGACGGTTTGTGCGCAGC CTTCAAAGGTGAAGCGGCTTTCCGCCAGTTGGTACTGCTCAACGTGGTCCTGGTCCCGCTGTCGTTTTTCCTGCACGTCA GCAAGGGCGAGCATGCCCTGCTGGTTGCCGTGTGCCTGCTGGCGCTGATCGTGGAGCTGCTCAATTCGGCCGTAGAGGCG GCCATTGACCGCATCTCGCTGGACCTGCACCCGCTGTCCAAGAACGCCAAGGACATGGGCAGTGCTGCCCAGTTCATCGC CCTGAGCATGATTGGTCTGGTGTGGGCGATCATTCTGCTGGGCTGA
Upstream 100 bases:
>100_bases CCATTTCGTCCAGCTGACGGCTTTCAGGTTGCGAGCATTCACGCTTTTTTGACCTTTATTGCCTTAGCTTTCCTCATCTT TTTTACACAGCAGCCTCTCT
Downstream 100 bases:
>100_bases CGCCTTTGGTACAGATCGTCAATACAGGCTGGGCAGCACGATCTCGTCGCTGCGCTGCACCCCGGCGGTGAATGCGCGAC ACAGTTCGAGAAACTCGCGC
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSPFKGQTGLKRILNAAGYSLDGLCAAFKGEAAFRQLVLLNVVLVPLSFFLHVSKGEHALLVAVCLLALIVELLNSAVEA AIDRISLDLHPLSKNAKDMGSAAQFIALSMIGLVWAIILLG
Sequences:
>Translated_121_residues MSPFKGQTGLKRILNAAGYSLDGLCAAFKGEAAFRQLVLLNVVLVPLSFFLHVSKGEHALLVAVCLLALIVELLNSAVEA AIDRISLDLHPLSKNAKDMGSAAQFIALSMIGLVWAIILLG >Mature_120_residues SPFKGQTGLKRILNAAGYSLDGLCAAFKGEAAFRQLVLLNVVLVPLSFFLHVSKGEHALLVAVCLLALIVELLNSAVEAA IDRISLDLHPLSKNAKDMGSAAQFIALSMIGLVWAIILLG
Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=115, Percent_Identity=46.0869565217391, Blast_Score=96, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 12828; Mature: 12696
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPFKGQTGLKRILNAAGYSLDGLCAAFKGEAAFRQLVLLNVVLVPLSFFLHVSKGEHAL CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVAVCLLALIVELLNSAVEAAIDRISLDLHPLSKNAKDMGSAAQFIALSMIGLVWAIILL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC G C >Mature Secondary Structure SPFKGQTGLKRILNAAGYSLDGLCAAFKGEAAFRQLVLLNVVLVPLSFFLHVSKGEHAL CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LVAVCLLALIVELLNSAVEAAIDRISLDLHPLSKNAKDMGSAAQFIALSMIGLVWAIILL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]