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The map label for this gene is agmR [H]

Identifier: 66044632

GI number: 66044632

Start: 1566964

End: 1567611

Strand: Direct

Name: agmR [H]

Synonym: Psyr_1384

Alternate gene names: 66044632

Gene position: 1566964-1567611 (Clockwise)

Preceding gene: 66044631

Following gene: 66044633

Centisome position: 25.71

GC content: 59.1

Gene sequence:

>648_bases
ATGACCTACGACATCCTGATCGCTGATGATCATCCCCTGTTTCGCAGTGCGCTGCATCAGGCGCTGAGCATTGGCCTGGG
GCCTGACGCACGGCTGGTCGAGGCAGAAAGCATTGCCCAGCTTGAGTCGCGCCTGGGGGAGAAGGCTGATTGGGATCTGG
TTCTGTTGGACCTGAACATGCCAGGGGCCTACGGCTTCTCCGGGCTGGTCCTGTTGCGTGGCCAGTACCCGCAGATACCG
GTGGTGATGGTCTCGGCGCAGGAAGAAGCCTCCATCGTGGTGCGCTCCAGAGAGTTTGGTGCCAGCGGCTTCATTCCCAA
ATCCAGCTCGCTGGAAGTCATTCAGCAGGCGGTACGCACGGTGCTTGACGGTGACGTCTGGTGGCCGCCGCAGGTCAATG
AAGTGATCAGTGTTTCAGACGAAGCAAAGGCTGCCAGCGCAGGCCTTGCCAGCCTGACGCCGCAGCAGTTTCGAGTGCTG
ACGATGGTCTGTGAAGGCTTGCTGAACAAGCAGATCGCTTCCGAACTCAGCGTGTCCGAAGCGACCATCAAGGCACATGT
CACAGCGATTTTCCGCAAGCTTGGCGTACGCACGCGTACCCAGGCAGCATTGTTGTTACAGCAGCTTGAGTCCATTTCGT
CCAGCTGA

Upstream 100 bases:

>100_bases
GCAGGGCACCGGGGCCCGCTTCGGGTTTCGCACTGTGCGTTCGCCAGCCTTGCTGGGCGGCCGAGTCTTCGGCCCCTCAC
TATAAAAACAGGATCATTAC

Downstream 100 bases:

>100_bases
CGGCTTTCAGGTTGCGAGCATTCACGCTTTTTTGACCTTTATTGCCTTAGCTTTCCTCATCTTTTTTACACAGCAGCCTC
TCTATGTCGCCCTTCAAAGG

Product: LuxR response regulator receiver

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTYDILIADDHPLFRSALHQALSIGLGPDARLVEAESIAQLESRLGEKADWDLVLLDLNMPGAYGFSGLVLLRGQYPQIP
VVMVSAQEEASIVVRSREFGASGFIPKSSSLEVIQQAVRTVLDGDVWWPPQVNEVISVSDEAKAASAGLASLTPQQFRVL
TMVCEGLLNKQIASELSVSEATIKAHVTAIFRKLGVRTRTQAALLLQQLESISSS

Sequences:

>Translated_215_residues
MTYDILIADDHPLFRSALHQALSIGLGPDARLVEAESIAQLESRLGEKADWDLVLLDLNMPGAYGFSGLVLLRGQYPQIP
VVMVSAQEEASIVVRSREFGASGFIPKSSSLEVIQQAVRTVLDGDVWWPPQVNEVISVSDEAKAASAGLASLTPQQFRVL
TMVCEGLLNKQIASELSVSEATIKAHVTAIFRKLGVRTRTQAALLLQQLESISSS
>Mature_214_residues
TYDILIADDHPLFRSALHQALSIGLGPDARLVEAESIAQLESRLGEKADWDLVLLDLNMPGAYGFSGLVLLRGQYPQIPV
VMVSAQEEASIVVRSREFGASGFIPKSSSLEVIQQAVRTVLDGDVWWPPQVNEVISVSDEAKAASAGLASLTPQQFRVLT
MVCEGLLNKQIASELSVSEATIKAHVTAIFRKLGVRTRTQAALLLQQLESISSS

Specific function: Positive activator for glycerol metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=208, Percent_Identity=33.6538461538462, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1786747, Length=200, Percent_Identity=27.5, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1787473, Length=206, Percent_Identity=32.0388349514563, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1788712, Length=200, Percent_Identity=28.5, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788222, Length=202, Percent_Identity=22.2772277227723, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789937, Length=155, Percent_Identity=27.741935483871, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790102, Length=205, Percent_Identity=29.7560975609756, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23255; Mature: 23124

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYDILIADDHPLFRSALHQALSIGLGPDARLVEAESIAQLESRLGEKADWDLVLLDLNM
CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHCCCCCCCCEEEEEECC
PGAYGFSGLVLLRGQYPQIPVVMVSAQEEASIVVRSREFGASGFIPKSSSLEVIQQAVRT
CCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
VLDGDVWWPPQVNEVISVSDEAKAASAGLASLTPQQFRVLTMVCEGLLNKQIASELSVSE
HHCCCCCCCCCCHHHEECCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATIKAHVTAIFRKLGVRTRTQAALLLQQLESISSS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TYDILIADDHPLFRSALHQALSIGLGPDARLVEAESIAQLESRLGEKADWDLVLLDLNM
CEEEEEECCCHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHCCCCCCCCEEEEEECC
PGAYGFSGLVLLRGQYPQIPVVMVSAQEEASIVVRSREFGASGFIPKSSSLEVIQQAVRT
CCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
VLDGDVWWPPQVNEVISVSDEAKAASAGLASLTPQQFRVLTMVCEGLLNKQIASELSVSE
HHCCCCCCCCCCHHHEECCCHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATIKAHVTAIFRKLGVRTRTQAALLLQQLESISSS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]