Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66044584

Identifier: 66044584

GI number: 66044584

Start: 1515149

End: 1516183

Strand: Reverse

Name: 66044584

Synonym: Psyr_1336

Alternate gene names: NA

Gene position: 1516183-1515149 (Counterclockwise)

Preceding gene: 66044585

Following gene: 66044583

Centisome position: 24.88

GC content: 61.35

Gene sequence:

>1035_bases
ATGTCCACCACCCTGTTCAGCCTGGCCTTCGGCGTCGGCACCCAAAATCGTCAAGGCGCATGGCTTGAAGTATTTTATGC
TCAGCCTCTGATCAATCCTTCTGCGGAACTGGTCGCGGCTATCGCACCGGTTCTGGGTTACACCGGCGGCAACCAGGCGA
TCACCTTTAATGTCGACATGGCCTACAAGCTGGCCGAAGCGGCCAAATCCGTGGAAGCTACTCAAGCCGCACTGCTGACT
CGTCTGGCCGAAAGCCAGAAGCCATTGGTCGCGACCCTGCTGGCTGAAGACGCCACATTGACGTCGACTCCCGAGGCGTA
CCTCAAGCTGCATCTGCTGTCGCACCGTCTGGTCAAGCCGCACGGTCTGAACCTGGCAGGTATCTTCCCCCTGCTGCCAA
ACGTGGCCTGGACCAGCCAGGGCGCGGTCGATCTGGCCGAACTGGCCGAACGTCAGCTCGAAGCACGCCTCAAGGGCGAG
CTGCTGGAAGTGTTCTCGGTCGACAAATTCCCGAAAATGACCGATTACGTCGTGCCGAGCGGCGTCCGTATCGCTGACAG
CGCTCGCGTGCGCCTGGGCGCCTACATCGGCGAAGGCACCACGGTCATGCACGAAGGCTTCGTCAACTTCAATGGCGGCA
CCGAAGGCCCGGGCATGATCGAAGGCCGCGTTTCCGCTGGCGTATTCGTCGGCAAGGGCTCGGATCTGGGCGGCGGCTGC
TCGACCATGGGTACGCTGTCCGGTGGTGGCAACATCATCATCAAGGTCGGTGAAGGCTGCCTGATCGGTGCCAACGCCGG
CATCGGCATCCCGCTGGGTGATCGCAACACCGTGGAGTCGGGCCTGTACGTGACCGCAGGTACCAAAGTCGCGCTGCTCG
ACGAAAACAATGAGCTGGTCAAGATCGTCAAGGCGCGCGAGCTGGCGGGTCAGACCGACCTGTTGTTCCGTCGCAACTCT
CAGACCGGCGCGGTGGAATGCAAAACCCACAAGTCGGCCGTCGAGCTGAACGAAGCACTGCACGCTCATAACTGA

Upstream 100 bases:

>100_bases
ATAAAACCCTGATCGGCTTCAAGCCTGACCTGTATGCAGCGGCTTTACAGTAAGCCAGAGCGCTACTGAAAGCCCCTTGA
TAAAGCCACGAGGTATTTAC

Downstream 100 bases:

>100_bases
TGCTGTGTGCGGGTTCAAGGCTGATGGCTTTGAACCCGCCTCCACACGCTGGACGAACAATGCCCCTCTTCTCTCCCTGG
CGTGGCGACTTCCCCGCCAT

Product: tetrahydrodipicolinate succinylase, putative

Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate

Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyltransferase; Succinyl-Transferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSTTLFSLAFGVGTQNRQGAWLEVFYAQPLINPSAELVAAIAPVLGYTGGNQAITFNVDMAYKLAEAAKSVEATQAALLT
RLAESQKPLVATLLAEDATLTSTPEAYLKLHLLSHRLVKPHGLNLAGIFPLLPNVAWTSQGAVDLAELAERQLEARLKGE
LLEVFSVDKFPKMTDYVVPSGVRIADSARVRLGAYIGEGTTVMHEGFVNFNGGTEGPGMIEGRVSAGVFVGKGSDLGGGC
STMGTLSGGGNIIIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNELVKIVKARELAGQTDLLFRRNS
QTGAVECKTHKSAVELNEALHAHN

Sequences:

>Translated_344_residues
MSTTLFSLAFGVGTQNRQGAWLEVFYAQPLINPSAELVAAIAPVLGYTGGNQAITFNVDMAYKLAEAAKSVEATQAALLT
RLAESQKPLVATLLAEDATLTSTPEAYLKLHLLSHRLVKPHGLNLAGIFPLLPNVAWTSQGAVDLAELAERQLEARLKGE
LLEVFSVDKFPKMTDYVVPSGVRIADSARVRLGAYIGEGTTVMHEGFVNFNGGTEGPGMIEGRVSAGVFVGKGSDLGGGC
STMGTLSGGGNIIIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNELVKIVKARELAGQTDLLFRRNS
QTGAVECKTHKSAVELNEALHAHN
>Mature_343_residues
STTLFSLAFGVGTQNRQGAWLEVFYAQPLINPSAELVAAIAPVLGYTGGNQAITFNVDMAYKLAEAAKSVEATQAALLTR
LAESQKPLVATLLAEDATLTSTPEAYLKLHLLSHRLVKPHGLNLAGIFPLLPNVAWTSQGAVDLAELAERQLEARLKGEL
LEVFSVDKFPKMTDYVVPSGVRIADSARVRLGAYIGEGTTVMHEGFVNFNGGTEGPGMIEGRVSAGVFVGKGSDLGGGCS
TMGTLSGGGNIIIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNELVKIVKARELAGQTDLLFRRNSQ
TGAVECKTHKSAVELNEALHAHN

Specific function: Unknown

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.117

Molecular weight: Translated: 36128; Mature: 35997

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTLFSLAFGVGTQNRQGAWLEVFYAQPLINPSAELVAAIAPVLGYTGGNQAITFNVDM
CCCEEEEHEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHH
AYKLAEAAKSVEATQAALLTRLAESQKPLVATLLAEDATLTSTPEAYLKLHLLSHRLVKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
HGLNLAGIFPLLPNVAWTSQGAVDLAELAERQLEARLKGELLEVFSVDKFPKMTDYVVPS
CCCCEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCC
GVRIADSARVRLGAYIGEGTTVMHEGFVNFNGGTEGPGMIEGRVSAGVFVGKGSDLGGGC
CCEEECCCEEEEEEEECCCEEEEEECEEEECCCCCCCCEEEEEEECEEEEECCCCCCCCC
STMGTLSGGGNIIIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNELV
CCCEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEE
KIVKARELAGQTDLLFRRNSQTGAVECKTHKSAVELNEALHAHN
EEEHHHHHCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure 
STTLFSLAFGVGTQNRQGAWLEVFYAQPLINPSAELVAAIAPVLGYTGGNQAITFNVDM
CCEEEEHEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHH
AYKLAEAAKSVEATQAALLTRLAESQKPLVATLLAEDATLTSTPEAYLKLHLLSHRLVKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
HGLNLAGIFPLLPNVAWTSQGAVDLAELAERQLEARLKGELLEVFSVDKFPKMTDYVVPS
CCCCEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCC
GVRIADSARVRLGAYIGEGTTVMHEGFVNFNGGTEGPGMIEGRVSAGVFVGKGSDLGGGC
CCEEECCCEEEEEEEECCCEEEEEECEEEECCCCCCCCEEEEEEECEEEEECCCCCCCCC
STMGTLSGGGNIIIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNELV
CCCEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEE
KIVKARELAGQTDLLFRRNSQTGAVECKTHKSAVELNEALHAHN
EEEHHHHHCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O

Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA