| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is bcsA [H]
Identifier: 66044580
GI number: 66044580
Start: 1509862
End: 1512357
Strand: Reverse
Name: bcsA [H]
Synonym: Psyr_1332
Alternate gene names: 66044580
Gene position: 1512357-1509862 (Counterclockwise)
Preceding gene: 66044582
Following gene: 66044579
Centisome position: 24.82
GC content: 54.49
Gene sequence:
>2496_bases ATGGATGAAAATTCAAACAATACAGGCACCTGGCCGACAAACCTTTTTAAAACCAGACTCAACTATCCGCCCAACTGGCC TGCAATGATCTCTGGCGTGGCCTACGCCCCTTTTCGACCGGGCCAAAGCCCCTACAAACAGATTTTTCCGACGCGTGATC AGATAAGAGAAGACCTGCTGCTACTTCGAAGCATTACACGGAATATAAGGACTTACTCGGTGGAAGGGACATTGATGCAT ATCCCCGAACTCGCCGAAGCACTGGGCATGAATGTCACGCTTGGCGTGTGGATAACAGAGGATGAAACGCACAATATCGA GGAAATAAATGCAGGGATCGAACTCGCCAACCGTTACTCCAGCGTGCAACGCCTGGTCTTGGGAAATGAAGTCCTGTTTC GTGATGATGTTCCCATCGATCTGCTTATTCACTATCTGCAGACCGCACGACGCGCCGTCAATGTGCCTGTTTCGACCTCC GAGATATGGACACAATGGTACGAGACGCCGGACCTCGTCAGGCATGTCGACTTCATTGCCGCCCATATTTTGCCTTTCTG GGAAGGCGTTTCAGCGCTGGACGCGACCGCGATCACTCTGGCACACGCGAACGAACTGAGAACGAGATTCCCCGACACCC CCCTCATACTTTCCGAGATTGGCTGGCCGAGCAAGGCCATCGCCAAGAGGCGGATGACGACCTCTGACGCAGAGCACTCG ATATACCTGCGCAACCAGATTCCATTACTGGATCAGCACGGCCATGACTATTTCGTGATAGAAGCCTTCGACCAGCACTG GAAGACTGAAGAAGGTCTGCCCGGGCCTAATTGGGGTTTGTTCGATGCAAAGCGCAGATTAAAACTGCACGTCAACGGCC CGGTAAAAATGCCGGTCAACATGCTCTCGGAAATACTCAGGCTTATCACCCGCCTTAAACCGGAGTCGTGGCCTGCAGGC GCCTTGATAATCGTGCTGGCTTATTGCGCATTGTCAGGGTTCGGCATGCACTACTCACAGCCACTGCCCGCCTGGCTCGC GCTGCCTGTCGTCTTTATCTGGGCTGCCAGCGTGCTGACTTACATGGGTATCGAAACGCACGAATTCCTCGAAGCCTGCT GGGGACCGGACACCCCACGCTCTTTCAGCCCCGTCCATCGTCCTGTTGGTCCCGCCCCGAAAGTTTCCCTGCATGTTCCG TGCTACAACGAACCTCCGGACATGGTGAAACGGACTCTCGACTCGTTGCAAACGCTGGACTACCCGGACTTCGAGGTGCT GGTTATCGACAACAATACTCAGGACCCGGCCATCTGGAAGCCTATCGAGCGATACTGTCAGCAGCTCGGCCCTCGGTTCC GGTTTTTTCATGTCAGTCCACTTCCCGGATTCAAAGCGGGTGCGCTCAACTACCTCCTGAGACATACCGCTGAAGACGCA GAGGTAGTGGCAGTCATCGACGCTGATTACTGCGTCCATCGACAGTGGCTCAAACATATGGTGCCCCACTTCACGGACCC GAAGGTTGCAGTCATTCAATCGCCGCAGGATTATCGCGACGGTCACGAAAGCCTGTTCAAGTGTTGCTGTCAGGCCGAGT ACCGAGGTTTTTTTAACATCGGCATGGTGATCCGTAACGATCACGATGCAATTATCCAGCACGGCACCATGACACTGATC CGCCGATCAGCACTGGACCGACTGGGCTGGGCGGAATGGTGCATATGCGAAGACGCCGAACTTGGCCTGCGTATGCTTGA AAGTGGTTTCTCCACTGGTTACGCCGCTATCAGCTATGGCAAAGGGCTGACTCCCGATACGTTCATGGACTTCAAGAAAC AACGATATCGCTGGGCATATGGAGCTATGCAGATCGTCAAGCGGCACGCCGGAAGCCTGATTGCAGGAAATTGCGCGTCC CTGAGCGCGATGCAACGCTACCATTTCATCGCGGGGTGGATGCCGTGGGTGGCAGAAGGAATGAATTATCTGTTAACGCT GGCTGCGTTGGCCTGGTCGATGGCAATGATCCTTAAGCCCGAGACTTTCGGGCCGCTGCCATGGATATTTTCCACGTCGT TGATACTGATGTTTGCCCTGCGCTCGTTCAAGATGATTGTGCTTTACCGGCGGTTGGTCAGCACACACATCAAAGAGGCA CTGGCGGCGATACTGGCCGGCATGGCGCTTTATCCGACCTTGGGCAAGGCAGTGCTGGCGGGGCTTTTCACCTCGGCGAT GCCTTTCTACAGAACGCCCAAACATACCTCTGCAAACCGGATCGGACAAAACCTGCTCGATGTAAGGGAAGAACTGTCTA CCTTGGCGATCTCCTGGATCGCGATTGTGCTTTTGCTCACAGGCAGGGCATCCATCGATACGAATTCCGGTTTCTGGATA ACCATGCTGTTCGCACAATCACTCCCTTATCTTGCAGCCATAACCATGGCTATCTTGTCGGCACGCGCAAACCGCCCGGC ACTGCCGACAACCTGA
Upstream 100 bases:
>100_bases TCTAAGCATTGCAAACGGCAATGAACGAGGGCGACTAAGGTTAACCAACGCGAAGGGAACTCGCGGCACCAGTGCAACAA GCATGGAGCACATTTCAAAC
Downstream 100 bases:
>100_bases CCTATCCACCGGGCACGATAAACGACGGCCTCAGGTCGTCGTTTTGCTTTAAGATATCCGCCTTTTCGCGCCCAAAGTCT TGCTACCGGAGTTCTGTACA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 831; Mature: 831
Protein sequence:
>831_residues MDENSNNTGTWPTNLFKTRLNYPPNWPAMISGVAYAPFRPGQSPYKQIFPTRDQIREDLLLLRSITRNIRTYSVEGTLMH IPELAEALGMNVTLGVWITEDETHNIEEINAGIELANRYSSVQRLVLGNEVLFRDDVPIDLLIHYLQTARRAVNVPVSTS EIWTQWYETPDLVRHVDFIAAHILPFWEGVSALDATAITLAHANELRTRFPDTPLILSEIGWPSKAIAKRRMTTSDAEHS IYLRNQIPLLDQHGHDYFVIEAFDQHWKTEEGLPGPNWGLFDAKRRLKLHVNGPVKMPVNMLSEILRLITRLKPESWPAG ALIIVLAYCALSGFGMHYSQPLPAWLALPVVFIWAASVLTYMGIETHEFLEACWGPDTPRSFSPVHRPVGPAPKVSLHVP CYNEPPDMVKRTLDSLQTLDYPDFEVLVIDNNTQDPAIWKPIERYCQQLGPRFRFFHVSPLPGFKAGALNYLLRHTAEDA EVVAVIDADYCVHRQWLKHMVPHFTDPKVAVIQSPQDYRDGHESLFKCCCQAEYRGFFNIGMVIRNDHDAIIQHGTMTLI RRSALDRLGWAEWCICEDAELGLRMLESGFSTGYAAISYGKGLTPDTFMDFKKQRYRWAYGAMQIVKRHAGSLIAGNCAS LSAMQRYHFIAGWMPWVAEGMNYLLTLAALAWSMAMILKPETFGPLPWIFSTSLILMFALRSFKMIVLYRRLVSTHIKEA LAAILAGMALYPTLGKAVLAGLFTSAMPFYRTPKHTSANRIGQNLLDVREELSTLAISWIAIVLLLTGRASIDTNSGFWI TMLFAQSLPYLAAITMAILSARANRPALPTT
Sequences:
>Translated_831_residues MDENSNNTGTWPTNLFKTRLNYPPNWPAMISGVAYAPFRPGQSPYKQIFPTRDQIREDLLLLRSITRNIRTYSVEGTLMH IPELAEALGMNVTLGVWITEDETHNIEEINAGIELANRYSSVQRLVLGNEVLFRDDVPIDLLIHYLQTARRAVNVPVSTS EIWTQWYETPDLVRHVDFIAAHILPFWEGVSALDATAITLAHANELRTRFPDTPLILSEIGWPSKAIAKRRMTTSDAEHS IYLRNQIPLLDQHGHDYFVIEAFDQHWKTEEGLPGPNWGLFDAKRRLKLHVNGPVKMPVNMLSEILRLITRLKPESWPAG ALIIVLAYCALSGFGMHYSQPLPAWLALPVVFIWAASVLTYMGIETHEFLEACWGPDTPRSFSPVHRPVGPAPKVSLHVP CYNEPPDMVKRTLDSLQTLDYPDFEVLVIDNNTQDPAIWKPIERYCQQLGPRFRFFHVSPLPGFKAGALNYLLRHTAEDA EVVAVIDADYCVHRQWLKHMVPHFTDPKVAVIQSPQDYRDGHESLFKCCCQAEYRGFFNIGMVIRNDHDAIIQHGTMTLI RRSALDRLGWAEWCICEDAELGLRMLESGFSTGYAAISYGKGLTPDTFMDFKKQRYRWAYGAMQIVKRHAGSLIAGNCAS LSAMQRYHFIAGWMPWVAEGMNYLLTLAALAWSMAMILKPETFGPLPWIFSTSLILMFALRSFKMIVLYRRLVSTHIKEA LAAILAGMALYPTLGKAVLAGLFTSAMPFYRTPKHTSANRIGQNLLDVREELSTLAISWIAIVLLLTGRASIDTNSGFWI TMLFAQSLPYLAAITMAILSARANRPALPTT >Mature_831_residues MDENSNNTGTWPTNLFKTRLNYPPNWPAMISGVAYAPFRPGQSPYKQIFPTRDQIREDLLLLRSITRNIRTYSVEGTLMH IPELAEALGMNVTLGVWITEDETHNIEEINAGIELANRYSSVQRLVLGNEVLFRDDVPIDLLIHYLQTARRAVNVPVSTS EIWTQWYETPDLVRHVDFIAAHILPFWEGVSALDATAITLAHANELRTRFPDTPLILSEIGWPSKAIAKRRMTTSDAEHS IYLRNQIPLLDQHGHDYFVIEAFDQHWKTEEGLPGPNWGLFDAKRRLKLHVNGPVKMPVNMLSEILRLITRLKPESWPAG ALIIVLAYCALSGFGMHYSQPLPAWLALPVVFIWAASVLTYMGIETHEFLEACWGPDTPRSFSPVHRPVGPAPKVSLHVP CYNEPPDMVKRTLDSLQTLDYPDFEVLVIDNNTQDPAIWKPIERYCQQLGPRFRFFHVSPLPGFKAGALNYLLRHTAEDA EVVAVIDADYCVHRQWLKHMVPHFTDPKVAVIQSPQDYRDGHESLFKCCCQAEYRGFFNIGMVIRNDHDAIIQHGTMTLI RRSALDRLGWAEWCICEDAELGLRMLESGFSTGYAAISYGKGLTPDTFMDFKKQRYRWAYGAMQIVKRHAGSLIAGNCAS LSAMQRYHFIAGWMPWVAEGMNYLLTLAALAWSMAMILKPETFGPLPWIFSTSLILMFALRSFKMIVLYRRLVSTHIKEA LAAILAGMALYPTLGKAVLAGLFTSAMPFYRTPKHTSANRIGQNLLDVREELSTLAISWIAIVLLLTGRASIDTNSGFWI TMLFAQSLPYLAAITMAILSARANRPALPTT
Specific function: Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component responsible for the structural integrity and rigidity of self-supporting mats characteristic of the "wrink
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PilZ domain [H]
Homologues:
Organism=Escherichia coli, GI87082284, Length=284, Percent_Identity=26.056338028169, Blast_Score=83, Evalue=7e-17, Organism=Escherichia coli, GI1787259, Length=265, Percent_Identity=24.9056603773585, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003919 - InterPro: IPR005150 - InterPro: IPR001173 - InterPro: IPR009875 [H]
Pfam domain/function: PF03552 Cellulose_synt; PF00535 Glycos_transf_2; PF07238 PilZ [H]
EC number: =2.4.1.12 [H]
Molecular weight: Translated: 93922; Mature: 93922
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDENSNNTGTWPTNLFKTRLNYPPNWPAMISGVAYAPFRPGQSPYKQIFPTRDQIREDLL CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCEECCCCCCCCHHHHHCCCHHHHHHHHH LLRSITRNIRTYSVEGTLMHIPELAEALGMNVTLGVWITEDETHNIEEINAGIELANRYS HHHHHHHHHEEEEECCCEEHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH SVQRLVLGNEVLFRDDVPIDLLIHYLQTARRAVNVPVSTSEIWTQWYETPDLVRHVDFIA HHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHH AHILPFWEGVSALDATAITLAHANELRTRFPDTPLILSEIGWPSKAIAKRRMTTSDAEHS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCE IYLRNQIPLLDQHGHDYFVIEAFDQHWKTEEGLPGPNWGLFDAKRRLKLHVNGPVKMPVN EEEECCCCCEECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHH MLSEILRLITRLKPESWPAGALIIVLAYCALSGFGMHYSQPLPAWLALPVVFIWAASVLT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH YMGIETHEFLEACWGPDTPRSFSPVHRPVGPAPKVSLHVPCYNEPPDMVKRTLDSLQTLD HHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCC YPDFEVLVIDNNTQDPAIWKPIERYCQQLGPRFRFFHVSPLPGFKAGALNYLLRHTAEDA CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC EVVAVIDADYCVHRQWLKHMVPHFTDPKVAVIQSPQDYRDGHESLFKCCCQAEYRGFFNI EEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHCCEEEE GMVIRNDHDAIIQHGTMTLIRRSALDRLGWAEWCICEDAELGLRMLESGFSTGYAAISYG EEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHCCCCCCEEEEECC KGLTPDTFMDFKKQRYRWAYGAMQIVKRHAGSLIAGNCASLSAMQRYHFIAGWMPWVAEG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH MNYLLTLAALAWSMAMILKPETFGPLPWIFSTSLILMFALRSFKMIVLYRRLVSTHIKEA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAILAGMALYPTLGKAVLAGLFTSAMPFYRTPKHTSANRIGQNLLDVREELSTLAISWI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AIVLLLTGRASIDTNSGFWITMLFAQSLPYLAAITMAILSARANRPALPTT HHHHHHCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDENSNNTGTWPTNLFKTRLNYPPNWPAMISGVAYAPFRPGQSPYKQIFPTRDQIREDLL CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCEECCCCCCCCHHHHHCCCHHHHHHHHH LLRSITRNIRTYSVEGTLMHIPELAEALGMNVTLGVWITEDETHNIEEINAGIELANRYS HHHHHHHHHEEEEECCCEEHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH SVQRLVLGNEVLFRDDVPIDLLIHYLQTARRAVNVPVSTSEIWTQWYETPDLVRHVDFIA HHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHH AHILPFWEGVSALDATAITLAHANELRTRFPDTPLILSEIGWPSKAIAKRRMTTSDAEHS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCE IYLRNQIPLLDQHGHDYFVIEAFDQHWKTEEGLPGPNWGLFDAKRRLKLHVNGPVKMPVN EEEECCCCCEECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHH MLSEILRLITRLKPESWPAGALIIVLAYCALSGFGMHYSQPLPAWLALPVVFIWAASVLT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH YMGIETHEFLEACWGPDTPRSFSPVHRPVGPAPKVSLHVPCYNEPPDMVKRTLDSLQTLD HHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCC YPDFEVLVIDNNTQDPAIWKPIERYCQQLGPRFRFFHVSPLPGFKAGALNYLLRHTAEDA CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC EVVAVIDADYCVHRQWLKHMVPHFTDPKVAVIQSPQDYRDGHESLFKCCCQAEYRGFFNI EEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHCCHHHHHHHHHHHHHHCCEEEE GMVIRNDHDAIIQHGTMTLIRRSALDRLGWAEWCICEDAELGLRMLESGFSTGYAAISYG EEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHCCCCCCEEEEECC KGLTPDTFMDFKKQRYRWAYGAMQIVKRHAGSLIAGNCASLSAMQRYHFIAGWMPWVAEG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH MNYLLTLAALAWSMAMILKPETFGPLPWIFSTSLILMFALRSFKMIVLYRRLVSTHIKEA HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAILAGMALYPTLGKAVLAGLFTSAMPFYRTPKHTSANRIGQNLLDVREELSTLAISWI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AIVLLLTGRASIDTNSGFWITMLFAQSLPYLAAITMAILSARANRPALPTT HHHHHHCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12019221 [H]