| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is guaB [H]
Identifier: 66044509
GI number: 66044509
Start: 1418116
End: 1419585
Strand: Direct
Name: guaB [H]
Synonym: Psyr_1261
Alternate gene names: 66044509
Gene position: 1418116-1419585 (Clockwise)
Preceding gene: 66044508
Following gene: 66044510
Centisome position: 23.27
GC content: 60.14
Gene sequence:
>1470_bases ATGCTGCGTATCAGTCAAGAAGCCCTTACATTCGACGACATTCTCCTTGTGCCCGGTTATTCCGAGGTACTCCCTAACGA AGTCAGTCTGAAAACCCGTTTGACCCGTGGCATCGAGCTGAATATACCTTTGGTCTCTGCTGCAATGGATACTGTCACCG AGGCCCGTCTGGCAATTGCCATGGCCCAGGAAGGCGGTATCGGTATCATCCACAAGAACATGACCATCGAGCAGCAAGCT GCCGAAGTGCGCAAGGTCAAGAAGTTCGAGGCCGGTGTCGTCAAGGACCCGATCACGATCGAAGCCGACGCCACTGTTCG CGATCTGTTCGAACTCACCCGCATGCACAACATTTCCGGCGTACCGGTCCTGCACAATGGCGACCTGGTCGGCATCGTGA CGTCCCGCGACGTACGCTTCGAAAACCGTCTTGATGTCCCTGTCCGCGAAGTGATGACGCCCAAAGAGCGTCTGGTCACC GTGCGCGAAGGCGCCGACAAGAACGAAGTGCGCGAACTGCTGCACAAGCACCGTCTTGAAAAAGTCCTGATCGTGGATGC CAATTTCGCGCTCAAGGGCATGATGACCGTCAAGGACATCGAAAAAGCCAAGGCTTATCCGCTGGCCAGCAAGGACGATC AGGCTCGCCTGCGTGTCGGCGCTGCAGTCGGTACCGGCAAGGACACCGGCGAGCGCGTCACCGCACTGGTCGCGGCTGGC GTTGATGTTGTTGTCGTCGACACCGCTCACGGCCATTCCAAAGGCGTGATCGACCGCGTCCGCTGGGTCAAGGAAAACTT CCCTCAGGTGCAGGTCATCGGTGGCAACATCGCCACTGGCGAAGCGGCCAGGGCACTGGTTGCCGCAGGCGCCGATGCAG TCAAGGTCGGTATCGGCCCGGGCTCCATCTGCACCACGCGTATCGTTGCCGGTGTCGGCGTGCCGCAGATCAGCGCCATC GCCAACGTTTCCGCTGCCCTTGAAGGCACTGGCGTGCCGATGATCGCCGACGGCGGTATCCGCTTCTCCGGTGACCTGTC CAAGGCCATCGTGGCTGGCGCCTCCTGCGTGATGATGGGCTCGATGTTCGCCGGTACTGAAGAAGCGCCAGGCGAGATCG AACTGTTTCAGGGCCGTTCCTACAAGGCCTATCGCGGCATGGGTTCGCTGGGTGCGATGTCCCAGGCGCAAGGCTCTTCC GATCGCTACTTCCAGGATTCCTCCGCCGGTGCCGAGAAGCTGGTGCCGGAAGGTATCGAAGGCCGTGTGGCCTATAAAGG TCCGTTGTCGGCCATCATCCATCAGTTGATGGGCGGCCTGCGTTCCTCCATGGGTTACACCGGCAGTGCCGACATCGAGC AGATGCGCACCAAGCCAGAGTTCGTTCGCATCACCGGTGCCGGTATGGCTGAGTCCCACGTCCATGACGTGCAGATCACC AAGGAAGCGCCGAACTATCGCGTCGGCTAA
Upstream 100 bases:
>100_bases CTATAAACAGCTTTGATAATAGGCTGAGGTTTACATTGAGCCGGGAGGGGTCTGTGGGTATAATGGCGCGCTTCCAATTT CCCGCCCGGGAGCCCCCGCG
Downstream 100 bases:
>100_bases AACCTCCAGCTTCAAGCCCCAAGCAATCAGCTACAAGCGGTAGTTACGCAAGTGTAACTACCGCATTGATTCCGACAACT TGCCGCTTGCAGCGTATAGC
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQA AEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISGVPVLHNGDLVGIVTSRDVRFENRLDVPVREVMTPKERLVT VREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAKAYPLASKDDQARLRVGAAVGTGKDTGERVTALVAAG VDVVVVDTAHGHSKGVIDRVRWVKENFPQVQVIGGNIATGEAARALVAAGADAVKVGIGPGSICTTRIVAGVGVPQISAI ANVSAALEGTGVPMIADGGIRFSGDLSKAIVAGASCVMMGSMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSS DRYFQDSSAGAEKLVPEGIEGRVAYKGPLSAIIHQLMGGLRSSMGYTGSADIEQMRTKPEFVRITGAGMAESHVHDVQIT KEAPNYRVG
Sequences:
>Translated_489_residues MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQA AEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISGVPVLHNGDLVGIVTSRDVRFENRLDVPVREVMTPKERLVT VREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAKAYPLASKDDQARLRVGAAVGTGKDTGERVTALVAAG VDVVVVDTAHGHSKGVIDRVRWVKENFPQVQVIGGNIATGEAARALVAAGADAVKVGIGPGSICTTRIVAGVGVPQISAI ANVSAALEGTGVPMIADGGIRFSGDLSKAIVAGASCVMMGSMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSS DRYFQDSSAGAEKLVPEGIEGRVAYKGPLSAIIHQLMGGLRSSMGYTGSADIEQMRTKPEFVRITGAGMAESHVHDVQIT KEAPNYRVG >Mature_489_residues MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQA AEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISGVPVLHNGDLVGIVTSRDVRFENRLDVPVREVMTPKERLVT VREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAKAYPLASKDDQARLRVGAAVGTGKDTGERVTALVAAG VDVVVVDTAHGHSKGVIDRVRWVKENFPQVQVIGGNIATGEAARALVAAGADAVKVGIGPGSICTTRIVAGVGVPQISAI ANVSAALEGTGVPMIADGGIRFSGDLSKAIVAGASCVMMGSMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSS DRYFQDSSAGAEKLVPEGIEGRVAYKGPLSAIIHQLMGGLRSSMGYTGSADIEQMRTKPEFVRITGAGMAESHVHDVQIT KEAPNYRVG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=484, Percent_Identity=42.1487603305785, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI217035146, Length=485, Percent_Identity=42.2680412371134, Blast_Score=359, Evalue=4e-99, Organism=Homo sapiens, GI34328928, Length=462, Percent_Identity=43.2900432900433, Blast_Score=357, Evalue=1e-98, Organism=Homo sapiens, GI34328930, Length=462, Percent_Identity=43.2900432900433, Blast_Score=357, Evalue=1e-98, Organism=Homo sapiens, GI156616279, Length=462, Percent_Identity=43.2900432900433, Blast_Score=357, Evalue=1e-98, Organism=Homo sapiens, GI217035152, Length=451, Percent_Identity=43.4589800443459, Blast_Score=350, Evalue=2e-96, Organism=Homo sapiens, GI217035148, Length=485, Percent_Identity=41.2371134020619, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI217035150, Length=485, Percent_Identity=38.7628865979381, Blast_Score=315, Evalue=5e-86, Organism=Homo sapiens, GI156104880, Length=260, Percent_Identity=35.7692307692308, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI50541954, Length=260, Percent_Identity=36.1538461538462, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI50541952, Length=260, Percent_Identity=36.1538461538462, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI50541948, Length=260, Percent_Identity=36.1538461538462, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI50541956, Length=260, Percent_Identity=36.1538461538462, Blast_Score=166, Evalue=3e-41, Organism=Escherichia coli, GI1788855, Length=490, Percent_Identity=66.734693877551, Blast_Score=608, Evalue=1e-175, Organism=Escherichia coli, GI1786293, Length=348, Percent_Identity=30.4597701149425, Blast_Score=154, Evalue=2e-38, Organism=Caenorhabditis elegans, GI71994385, Length=502, Percent_Identity=38.0478087649402, Blast_Score=298, Evalue=4e-81, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=41.4691943127962, Blast_Score=291, Evalue=5e-79, Organism=Caenorhabditis elegans, GI17560440, Length=286, Percent_Identity=32.1678321678322, Blast_Score=164, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=41.5289256198347, Blast_Score=345, Evalue=7e-96, Organism=Saccharomyces cerevisiae, GI6322012, Length=484, Percent_Identity=41.1157024793388, Blast_Score=344, Evalue=2e-95, Organism=Saccharomyces cerevisiae, GI6323464, Length=484, Percent_Identity=41.7355371900826, Blast_Score=336, Evalue=5e-93, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=42.0118343195266, Blast_Score=263, Evalue=7e-71, Organism=Saccharomyces cerevisiae, GI6319353, Length=102, Percent_Identity=43.1372549019608, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=42.0289855072464, Blast_Score=348, Evalue=5e-96, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=42.0289855072464, Blast_Score=348, Evalue=5e-96, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=41.9501133786848, Blast_Score=309, Evalue=2e-84,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52002; Mature: 52002
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIA CCEECCHHCCCCCEEECCCHHHHCCCCCEEHHHHCCCEEECCCHHHHHHHHHHHHHHEEE MAQEGGIGIIHKNMTIEQQAAEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISG EECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCC VPVLHNGDLVGIVTSRDVRFENRLDVPVREVMTPKERLVTVREGADKNEVRELLHKHRLE CEEEECCCEEEEEECCCCCCCCCCCCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHCCC KVLIVDANFALKGMMTVKDIEKAKAYPLASKDDQARLRVGAAVGTGKDTGERVTALVAAG EEEEEECCCCEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCC VDVVVVDTAHGHSKGVIDRVRWVKENFPQVQVIGGNIATGEAARALVAAGADAVKVGIGP CEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCC GSICTTRIVAGVGVPQISAIANVSAALEGTGVPMIADGGIRFSGDLSKAIVAGASCVMMG CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEECCCHHHHHHHCCHHHHHH SMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSSDRYFQDSSAGAEKLVPEGIE HHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCHHCCCCCCCEECCCCCCHHHHCCCCCC GRVAYKGPLSAIIHQLMGGLRSSMGYTGSADIEQMRTKPEFVRITGAGMAESHVHDVQIT CEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEE KEAPNYRVG CCCCCCCCC >Mature Secondary Structure MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIA CCEECCHHCCCCCEEECCCHHHHCCCCCEEHHHHCCCEEECCCHHHHHHHHHHHHHHEEE MAQEGGIGIIHKNMTIEQQAAEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISG EECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCC VPVLHNGDLVGIVTSRDVRFENRLDVPVREVMTPKERLVTVREGADKNEVRELLHKHRLE CEEEECCCEEEEEECCCCCCCCCCCCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHCCC KVLIVDANFALKGMMTVKDIEKAKAYPLASKDDQARLRVGAAVGTGKDTGERVTALVAAG EEEEEECCCCEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCC VDVVVVDTAHGHSKGVIDRVRWVKENFPQVQVIGGNIATGEAARALVAAGADAVKVGIGP CEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCC GSICTTRIVAGVGVPQISAIANVSAALEGTGVPMIADGGIRFSGDLSKAIVAGASCVMMG CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEECCCHHHHHHHCCHHHHHH SMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSSDRYFQDSSAGAEKLVPEGIE HHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCHHCCCCCCCEECCCCCCHHHHCCCCCC GRVAYKGPLSAIIHQLMGGLRSSMGYTGSADIEQMRTKPEFVRITGAGMAESHVHDVQIT CEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEE KEAPNYRVG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA