| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is suhB [H]
Identifier: 66044481
GI number: 66044481
Start: 1391505
End: 1392320
Strand: Reverse
Name: suhB [H]
Synonym: Psyr_1233
Alternate gene names: 66044481
Gene position: 1392320-1391505 (Counterclockwise)
Preceding gene: 66044503
Following gene: 66044474
Centisome position: 22.85
GC content: 62.87
Gene sequence:
>816_bases ATGCAGCCCATGCTGAATATCGCGCTGCGCGCCGCCCGCAGCGCCAGCGAATTGATTTTCCGCTCCATCGAGCGCCTGGA TACCATCAAGGTTGACGAAAAAGAAGCCAAAGACTACGTCACAGAGATCGACCGCGCTGCCGAGCAAAGCATCATCACCG CTCTGCGCAAGGCCTACCCGACTCACGGCATTCTCGGCGAAGAAAGCGGCCTGCACGAAGGCAGCGGCGAAGGCACCGAC TACCTGTGGATCATCGACCCACTGGACGGCACTACCAACTTCGTTCGCGGCATCCCGCACTTTGCCGTCAGCATCGCCTG CAAATACCGCGGCCGCCTCGAGCACGCCGTGGTTCTCGATCCGGTCCGCCAGGAAGAATTCACCGCCAGCCGTGGTCGTG GCGCTGCCCTGAACGGTCGCCGTCTGCGCGTCAGCCAGCGCAAGAGCCTGGAAGGCGCCCTGCTCGGCACCGGCTTCCCG TTTCGTGACAACCAGATGGACAACATCGAGAACTACCTGGGTATGTTCCGCAGCCTGGTAGGCCAGACCGCCGGCATCCG CCGCGCAGGCGCTGCCAGCCTCGACCTGGCTTATGTTGCTGCTGGTCGCTTCGATGCGTTCTGGGAGTCAGGCCTGTCCG AGTGGGACATGGCTGCGGGCGCCCTGCTCATTCAGGAAGCAGGCGGCCTGGTCAGCGACTTCACCGGCGGTCACGACTTC CTCGAGAAAGGCCACATCGTTGCCGGCAATACCAAGTGCTTCAAGGCGGTTCTGACCGCGATCGCACCGCACCTGCCAGC TTCGCTCAAGCGTTAA
Upstream 100 bases:
>100_bases CACACACGAACCCGACAACCGTAACAACGCAAGGCTGGAAATAATTCGAATCAGCCCATAGAATGCCCGGCTCTCTTTAA CAACCTTAGGTGAATTATCC
Downstream 100 bases:
>100_bases GCGGCAGGCATAAAAAAACCGGCGCAAGCCGGTTTTTTTATGTCTTGTGAAACTCAGCGGCTGGCGTTATTGCGCCTGAC CCAATATCAGCTGACCGTTC
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MQPMLNIALRAARSASELIFRSIERLDTIKVDEKEAKDYVTEIDRAAEQSIITALRKAYPTHGILGEESGLHEGSGEGTD YLWIIDPLDGTTNFVRGIPHFAVSIACKYRGRLEHAVVLDPVRQEEFTASRGRGAALNGRRLRVSQRKSLEGALLGTGFP FRDNQMDNIENYLGMFRSLVGQTAGIRRAGAASLDLAYVAAGRFDAFWESGLSEWDMAAGALLIQEAGGLVSDFTGGHDF LEKGHIVAGNTKCFKAVLTAIAPHLPASLKR
Sequences:
>Translated_271_residues MQPMLNIALRAARSASELIFRSIERLDTIKVDEKEAKDYVTEIDRAAEQSIITALRKAYPTHGILGEESGLHEGSGEGTD YLWIIDPLDGTTNFVRGIPHFAVSIACKYRGRLEHAVVLDPVRQEEFTASRGRGAALNGRRLRVSQRKSLEGALLGTGFP FRDNQMDNIENYLGMFRSLVGQTAGIRRAGAASLDLAYVAAGRFDAFWESGLSEWDMAAGALLIQEAGGLVSDFTGGHDF LEKGHIVAGNTKCFKAVLTAIAPHLPASLKR >Mature_271_residues MQPMLNIALRAARSASELIFRSIERLDTIKVDEKEAKDYVTEIDRAAEQSIITALRKAYPTHGILGEESGLHEGSGEGTD YLWIIDPLDGTTNFVRGIPHFAVSIACKYRGRLEHAVVLDPVRQEEFTASRGRGAALNGRRLRVSQRKSLEGALLGTGFP FRDNQMDNIENYLGMFRSLVGQTAGIRRAGAASLDLAYVAAGRFDAFWESGLSEWDMAAGALLIQEAGGLVSDFTGGHDF LEKGHIVAGNTKCFKAVLTAIAPHLPASLKR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI221625487, Length=253, Percent_Identity=33.596837944664, Blast_Score=146, Evalue=2e-35, Organism=Homo sapiens, GI5031789, Length=253, Percent_Identity=33.596837944664, Blast_Score=146, Evalue=2e-35, Organism=Homo sapiens, GI7657236, Length=255, Percent_Identity=36.8627450980392, Blast_Score=142, Evalue=2e-34, Organism=Homo sapiens, GI221625507, Length=158, Percent_Identity=36.7088607594937, Blast_Score=102, Evalue=5e-22, Organism=Escherichia coli, GI1788882, Length=271, Percent_Identity=53.5055350553505, Blast_Score=291, Evalue=2e-80, Organism=Caenorhabditis elegans, GI193202570, Length=260, Percent_Identity=31.1538461538462, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI193202572, Length=257, Percent_Identity=31.1284046692607, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320493, Length=207, Percent_Identity=32.3671497584541, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321836, Length=203, Percent_Identity=29.064039408867, Blast_Score=102, Evalue=7e-23, Organism=Drosophila melanogaster, GI21357329, Length=275, Percent_Identity=36, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI21357303, Length=210, Percent_Identity=36.1904761904762, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI24664926, Length=264, Percent_Identity=30.6818181818182, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24664922, Length=264, Percent_Identity=29.9242424242424, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI21357957, Length=227, Percent_Identity=35.6828193832599, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24664918, Length=239, Percent_Identity=33.4728033472803, Blast_Score=115, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29546; Mature: 29546
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPMLNIALRAARSASELIFRSIERLDTIKVDEKEAKDYVTEIDRAAEQSIITALRKAYP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC THGILGEESGLHEGSGEGTDYLWIIDPLDGTTNFVRGIPHFAVSIACKYRGRLEHAVVLD CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEEC PVRQEEFTASRGRGAALNGRRLRVSQRKSLEGALLGTGFPFRDNQMDNIENYLGMFRSLV CHHHHHHHHCCCCCCCCCCCEEEHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH GQTAGIRRAGAASLDLAYVAAGRFDAFWESGLSEWDMAAGALLIQEAGGLVSDFTGGHDF HHHHCCHHCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHH LEKGHIVAGNTKCFKAVLTAIAPHLPASLKR HHCCCEEECCHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MQPMLNIALRAARSASELIFRSIERLDTIKVDEKEAKDYVTEIDRAAEQSIITALRKAYP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC THGILGEESGLHEGSGEGTDYLWIIDPLDGTTNFVRGIPHFAVSIACKYRGRLEHAVVLD CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEEC PVRQEEFTASRGRGAALNGRRLRVSQRKSLEGALLGTGFPFRDNQMDNIENYLGMFRSLV CHHHHHHHHCCCCCCCCCCCEEEHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH GQTAGIRRAGAASLDLAYVAAGRFDAFWESGLSEWDMAAGALLIQEAGGLVSDFTGGHDF HHHHCCHHCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHH LEKGHIVAGNTKCFKAVLTAIAPHLPASLKR HHCCCEEECCHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]