Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66044474

Identifier: 66044474

GI number: 66044474

Start: 1384596

End: 1384949

Strand: Reverse

Name: 66044474

Synonym: Psyr_1226

Alternate gene names: NA

Gene position: 1384949-1384596 (Counterclockwise)

Preceding gene: 66044481

Following gene: 66044473

Centisome position: 22.73

GC content: 61.3

Gene sequence:

>354_bases
TTGGCTCTCACTGACACAGCCGCTCGTACCGCAAAGCCCCGCGAAAAACTCTACTGTCTAACGGCTACCGCTGGCCTTTG
CCTTGAGGTCACACGTGGCGGCTCGAAGCTTTGGCGGTTCCGTTACCGGTCCGCGAGGACTGCAAACATGAGCATCACCA
AACCTGAAACGCTACCCAAGCCGATTCAGCGAGCGCTAAACCAGATCGCTCACAGCCGGCCCCTGCTCTACCAGGCAGCC
TGCCGCGATCAGATCGGGAAGGAAATCGACACGCTACTGGCCAGAGGCATGAGCCATCAGGACGCGATCGAGCCGCTGCG
GGCCTGCCCGCCGACTCTCGACCCGGACTACTAG

Upstream 100 bases:

>100_bases
CCCAGTTTATTGTGAGTAGATCGAGTTCGGTCCAGATTTCCACTCACACTCTGACGGGAAAATCCCCCGCCAGCGCCAGC
GCCAGCCCAGAGGGTTTGTC

Downstream 100 bases:

>100_bases
GCCAAGTGGTTGCCAACCCCCGCCGATTTGGTACGAAAACAGCGATTCTGGCAGCGAATGAGCGATTCAAGGCGCTGAAA
AACGCCGTTTACGGATTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MALTDTAARTAKPREKLYCLTATAGLCLEVTRGGSKLWRFRYRSARTANMSITKPETLPKPIQRALNQIAHSRPLLYQAA
CRDQIGKEIDTLLARGMSHQDAIEPLRACPPTLDPDY

Sequences:

>Translated_117_residues
MALTDTAARTAKPREKLYCLTATAGLCLEVTRGGSKLWRFRYRSARTANMSITKPETLPKPIQRALNQIAHSRPLLYQAA
CRDQIGKEIDTLLARGMSHQDAIEPLRACPPTLDPDY
>Mature_116_residues
ALTDTAARTAKPREKLYCLTATAGLCLEVTRGGSKLWRFRYRSARTANMSITKPETLPKPIQRALNQIAHSRPLLYQAAC
RDQIGKEIDTLLARGMSHQDAIEPLRACPPTLDPDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13068; Mature: 12937

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTDTAARTAKPREKLYCLTATAGLCLEVTRGGSKLWRFRYRSARTANMSITKPETLPK
CCCCCCHHHCCCCHHHEEEEECCCCHHEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCH
PIQRALNQIAHSRPLLYQAACRDQIGKEIDTLLARGMSHQDAIEPLRACPPTLDPDY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ALTDTAARTAKPREKLYCLTATAGLCLEVTRGGSKLWRFRYRSARTANMSITKPETLPK
CCCCCHHHCCCCHHHEEEEECCCCHHEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCH
PIQRALNQIAHSRPLLYQAACRDQIGKEIDTLLARGMSHQDAIEPLRACPPTLDPDY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA