Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 66044477

GI number: 66044477

Start: 1387602

End: 1387937

Strand: Direct

Name: yajC [H]

Synonym: Psyr_1229

Alternate gene names: 66044477

Gene position: 1387602-1387937 (Clockwise)

Preceding gene: 66044476

Following gene: 66044478

Centisome position: 22.77

GC content: 55.06

Gene sequence:

>336_bases
ATGAGCTTTTTCATCTCTCCCGCTTTTGCGGATGCTGCTGCACCGGCTGCCGGTCCTGCGGGCAGTGGTTTCGAGTGGAT
TTTCCTGGTCGGCTTTCTGGTCATCTTCTACCTGATGATCTGGCGTCCACAGGCCAAGCGTGCCAAAGAGCAGAAAAACC
TGCTGGGTAACCTGCAGAAAGGCGACGAAGTTGTCACCAGTGGCGGTATCGCGGGCAAGATCAACAAAGTGACCGATGAC
TTTGTGGTCATCGAAGTGTCTGACACCGTTGAGCTGAAAATCCAGAAGGGCGCCATCGCGGCCACTCTGCCTAAAGGCAC
CCTGAAAGCGATCTGA

Upstream 100 bases:

>100_bases
ATGCCTTCTATGCCAAACGCGGCCTTCCAACGCCGCCTCTGGGTTGAAACAGAACGAGTTTTTCCTGCTTTTTATACTAA
TTATGTAACTGGAGCGACAA

Downstream 100 bases:

>100_bases
GCAACAACTTTTTACCCATCGACGGGGCGCGCAAGGCGCCCCGCGTTTTAAGCGGGCGGCGTGATGCTGAACAAATACCC
TCTGTGGAAATACGTACTGA

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSFFISPAFADAAAPAAGPAGSGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLGNLQKGDEVVTSGGIAGKINKVTDD
FVVIEVSDTVELKIQKGAIAATLPKGTLKAI

Sequences:

>Translated_111_residues
MSFFISPAFADAAAPAAGPAGSGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLGNLQKGDEVVTSGGIAGKINKVTDD
FVVIEVSDTVELKIQKGAIAATLPKGTLKAI
>Mature_110_residues
SFFISPAFADAAAPAAGPAGSGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLGNLQKGDEVVTSGGIAGKINKVTDDF
VVIEVSDTVELKIQKGAIAATLPKGTLKAI

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=112, Percent_Identity=49.1071428571429, Blast_Score=105, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11826; Mature: 11695

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFISPAFADAAAPAAGPAGSGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLGNLQK
CCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
GDEVVTSGGIAGKINKVTDDFVVIEVSDTVELKIQKGAIAATLPKGTLKAI
CCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEECCCCCCCCC
>Mature Secondary Structure 
SFFISPAFADAAAPAAGPAGSGFEWIFLVGFLVIFYLMIWRPQAKRAKEQKNLLGNLQK
CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
GDEVVTSGGIAGKINKVTDDFVVIEVSDTVELKIQKGAIAATLPKGTLKAI
CCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]