| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044455
Identifier: 66044455
GI number: 66044455
Start: 1361898
End: 1363601
Strand: Reverse
Name: 66044455
Synonym: Psyr_1204
Alternate gene names: NA
Gene position: 1363601-1361898 (Counterclockwise)
Preceding gene: 66044456
Following gene: 66044454
Centisome position: 22.38
GC content: 49.12
Gene sequence:
>1704_bases ATGCCAGGGATAGAGTTTTACTTTTCAACCGCACTTAACATTGACAACATTGATGGCATCCATCTACTGCAAGATCACAT TGGCACCTATTATTCCAAGGCCTGGGATGACTTTGGTTATATCGTCACCTTTCAGGTCTATCATGTAGAGCATGGCAGGC GCGAGTCCTTGGGGCGCACCAAGTTACTTGTGAATGGTTATGATGACTCTTCAATTTATTTTTTAACATCCCATGATAAA GTCGGAGAAAGCGTTCGAATTACGAAACTGTTGGATCATAAAAAGGTGGTCTCGCTATCATCCGACATTGATTATTATCG TAGGATCCACGCTCTCATTCCCCAGAGGGCAGAAGACTACCTGCGTCAGATTTGTGACGGGAGTTATAATCTGCATGCGT ACGGAGATTTTTCAAACTGGGAGGGTTTCGAGCTGTCCCTGTTCAGAGATCGCCTTGCTAAGGCCATCTTAAAAAAAGGC TATCAGATAGCGCTAGGCAGCTATGAAGCGCAGGAACAGTTCTCGTTCAAGCTGGAGGGGCTTCCGGATAACTTTGACGC TGTCGAATTTAATTTTGACAACGCCAGGCAGTTAGGTCGTACCAATATCAACTTACTCATTGGCCGGAACGGTGTCGGAA AAAGCCACGTCCTCCGCCACTTGATAGATTTGGTTACGGGAGTGGAAAAACATGCTGAGAGCTGGCCCTTCTTCCATAAA GTCATTGTGGCAGCCTATTCACCCTTTGAGTCGTTCAAAACCGAGGTTGAGCTGTCAAATGCCTTGCCAAACCAAGCCAT GGCCCAGACTGACGACAGTCACGAAAGTGATCTGACAGCTAAAGATGAGCAAGAACGACGCAGGCGACTGGTCAATGAAT ATGTCTACATTGGTTTCCGTGACCCTGAGGGTAAGTTTTCCCTGACGTGGCCTAAAGAAAGTAGCGCTCGAGCACTCCAT CGTATCGTTCAATATGATGCAGATAACGAATGGACTGGCGGTAGCCGTTTCGAGCTGCTGTTTGATACGTTGTCCCACTC CATTGATTTTGATGCAGTTCAAGTTTTCAATTCAGATGATTCGTCGATAGTGCTTAGCCGCACCACGGAAGCGGTACGGC TGAGTCTCGCTATGCGCAAGGATTTTAATTACGCGGCGGGTATCGAATTCCTAAAAGGAGGTAGAACGGTTCCTCTGAGT TCCGGGCAGACCATCTATTCCTACCTGCTGCCGAACTTAGTCGCCGAAGTGGACGAGGAGAGCCTGCTCATCCTTGACGA GCCAGAACTGTATCTCCACCCGTCAATGGAGGTCGGGCTTTTGGATATGCTGAAGCAGTTGCTTGCCGCGACAAAATCCA ACGCGATCATTGCTACGCATTCGACGATATTAGCGCGAGAGGTAGAGCGGTCTGCGATTTCGGTGCTGCGAAAGGTGGAG GATAGGACAGATGTTTCGAGACCCAATTTTGAAACATTTGGTCAGACCGTGGAAGTCATCATGGGACTGGCGTTTGATGA CTATCAGACGCGCAAGCCCTACGAAGACTCAATTGACGAAGCTGTCGCCGATTGCGCGAGTCCCGAGGAGGCCCTTGAGA AGCTCGGTCCCAAGGTAGGAGACGAGGCACTGGCGTATCTGAGCGGTAAACTTATCGCGGGTGAGAATGATGTGGAGCCG GATATTGAGCGGAGGCCGAAATGA
Upstream 100 bases:
>100_bases TGGGGCACCCGCTTGATGCATTGCAAAGGGCTTGCAGTGGAATATTGCCAAGCGTAGGCTGTTTTAAAGTAGTTGGGAAA ATTTTTAAAAGGACTTATGC
Downstream 100 bases:
>100_bases AGGACCTCTCATACCTTCGCACTGGACCGGGTTGCTCTTGGTTTGAATTGGCTATTGGCTCAGCTAAAAAAAACACTGCC ATACTTGGATTTATTAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: AAA ATPase; Lambdoid Prophage Protein; Phage PhiHau3 Resistance Protein; Phage Hau3 Resistance Protein; AAA Type ATPase; Phage-Related Protein; Phage Protein; Phage Resistance Endonuclease
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MPGIEFYFSTALNIDNIDGIHLLQDHIGTYYSKAWDDFGYIVTFQVYHVEHGRRESLGRTKLLVNGYDDSSIYFLTSHDK VGESVRITKLLDHKKVVSLSSDIDYYRRIHALIPQRAEDYLRQICDGSYNLHAYGDFSNWEGFELSLFRDRLAKAILKKG YQIALGSYEAQEQFSFKLEGLPDNFDAVEFNFDNARQLGRTNINLLIGRNGVGKSHVLRHLIDLVTGVEKHAESWPFFHK VIVAAYSPFESFKTEVELSNALPNQAMAQTDDSHESDLTAKDEQERRRRLVNEYVYIGFRDPEGKFSLTWPKESSARALH RIVQYDADNEWTGGSRFELLFDTLSHSIDFDAVQVFNSDDSSIVLSRTTEAVRLSLAMRKDFNYAAGIEFLKGGRTVPLS SGQTIYSYLLPNLVAEVDEESLLILDEPELYLHPSMEVGLLDMLKQLLAATKSNAIIATHSTILAREVERSAISVLRKVE DRTDVSRPNFETFGQTVEVIMGLAFDDYQTRKPYEDSIDEAVADCASPEEALEKLGPKVGDEALAYLSGKLIAGENDVEP DIERRPK
Sequences:
>Translated_567_residues MPGIEFYFSTALNIDNIDGIHLLQDHIGTYYSKAWDDFGYIVTFQVYHVEHGRRESLGRTKLLVNGYDDSSIYFLTSHDK VGESVRITKLLDHKKVVSLSSDIDYYRRIHALIPQRAEDYLRQICDGSYNLHAYGDFSNWEGFELSLFRDRLAKAILKKG YQIALGSYEAQEQFSFKLEGLPDNFDAVEFNFDNARQLGRTNINLLIGRNGVGKSHVLRHLIDLVTGVEKHAESWPFFHK VIVAAYSPFESFKTEVELSNALPNQAMAQTDDSHESDLTAKDEQERRRRLVNEYVYIGFRDPEGKFSLTWPKESSARALH RIVQYDADNEWTGGSRFELLFDTLSHSIDFDAVQVFNSDDSSIVLSRTTEAVRLSLAMRKDFNYAAGIEFLKGGRTVPLS SGQTIYSYLLPNLVAEVDEESLLILDEPELYLHPSMEVGLLDMLKQLLAATKSNAIIATHSTILAREVERSAISVLRKVE DRTDVSRPNFETFGQTVEVIMGLAFDDYQTRKPYEDSIDEAVADCASPEEALEKLGPKVGDEALAYLSGKLIAGENDVEP DIERRPK >Mature_566_residues PGIEFYFSTALNIDNIDGIHLLQDHIGTYYSKAWDDFGYIVTFQVYHVEHGRRESLGRTKLLVNGYDDSSIYFLTSHDKV GESVRITKLLDHKKVVSLSSDIDYYRRIHALIPQRAEDYLRQICDGSYNLHAYGDFSNWEGFELSLFRDRLAKAILKKGY QIALGSYEAQEQFSFKLEGLPDNFDAVEFNFDNARQLGRTNINLLIGRNGVGKSHVLRHLIDLVTGVEKHAESWPFFHKV IVAAYSPFESFKTEVELSNALPNQAMAQTDDSHESDLTAKDEQERRRRLVNEYVYIGFRDPEGKFSLTWPKESSARALHR IVQYDADNEWTGGSRFELLFDTLSHSIDFDAVQVFNSDDSSIVLSRTTEAVRLSLAMRKDFNYAAGIEFLKGGRTVPLSS GQTIYSYLLPNLVAEVDEESLLILDEPELYLHPSMEVGLLDMLKQLLAATKSNAIIATHSTILAREVERSAISVLRKVED RTDVSRPNFETFGQTVEVIMGLAFDDYQTRKPYEDSIDEAVADCASPEEALEKLGPKVGDEALAYLSGKLIAGENDVEPD IERRPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64280; Mature: 64149
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGIEFYFSTALNIDNIDGIHLLQDHIGTYYSKAWDDFGYIVTFQVYHVEHGRRESLGRT CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHCCCCE KLLVNGYDDSSIYFLTSHDKVGESVRITKLLDHKKVVSLSSDIDYYRRIHALIPQRAEDY EEEEECCCCCEEEEEECCCCCCCCEEHHHHHCCHHHHHHHCCHHHHHHHHHHCCHHHHHH LRQICDGSYNLHAYGDFSNWEGFELSLFRDRLAKAILKKGYQIALGSYEAQEQFSFKLEG HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECC LPDNFDAVEFNFDNARQLGRTNINLLIGRNGVGKSHVLRHLIDLVTGVEKHAESWPFFHK CCCCCCEEEECCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH VIVAAYSPFESFKTEVELSNALPNQAMAQTDDSHESDLTAKDEQERRRRLVNEYVYIGFR HHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEE DPEGKFSLTWPKESSARALHRIVQYDADNEWTGGSRFELLFDTLSHSIDFDAVQVFNSDD CCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC SSIVLSRTTEAVRLSLAMRKDFNYAAGIEFLKGGRTVPLSSGQTIYSYLLPNLVAEVDEE CEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCC SLLILDEPELYLHPSMEVGLLDMLKQLLAATKSNAIIATHSTILAREVERSAISVLRKVE CEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH DRTDVSRPNFETFGQTVEVIMGLAFDDYQTRKPYEDSIDEAVADCASPEEALEKLGPKVG HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCC DEALAYLSGKLIAGENDVEPDIERRPK HHHHHHHCCEEEECCCCCCCCHHCCCC >Mature Secondary Structure PGIEFYFSTALNIDNIDGIHLLQDHIGTYYSKAWDDFGYIVTFQVYHVEHGRRESLGRT CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHCCCCE KLLVNGYDDSSIYFLTSHDKVGESVRITKLLDHKKVVSLSSDIDYYRRIHALIPQRAEDY EEEEECCCCCEEEEEECCCCCCCCEEHHHHHCCHHHHHHHCCHHHHHHHHHHCCHHHHHH LRQICDGSYNLHAYGDFSNWEGFELSLFRDRLAKAILKKGYQIALGSYEAQEQFSFKLEG HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECC LPDNFDAVEFNFDNARQLGRTNINLLIGRNGVGKSHVLRHLIDLVTGVEKHAESWPFFHK CCCCCCEEEECCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH VIVAAYSPFESFKTEVELSNALPNQAMAQTDDSHESDLTAKDEQERRRRLVNEYVYIGFR HHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEE DPEGKFSLTWPKESSARALHRIVQYDADNEWTGGSRFELLFDTLSHSIDFDAVQVFNSDD CCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC SSIVLSRTTEAVRLSLAMRKDFNYAAGIEFLKGGRTVPLSSGQTIYSYLLPNLVAEVDEE CEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCC SLLILDEPELYLHPSMEVGLLDMLKQLLAATKSNAIIATHSTILAREVERSAISVLRKVE CEEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH DRTDVSRPNFETFGQTVEVIMGLAFDDYQTRKPYEDSIDEAVADCASPEEALEKLGPKVG HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCC DEALAYLSGKLIAGENDVEPDIERRPK HHHHHHHCCEEEECCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA