| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044413
Identifier: 66044413
GI number: 66044413
Start: 1316345
End: 1316740
Strand: Reverse
Name: 66044413
Synonym: Psyr_1162
Alternate gene names: NA
Gene position: 1316740-1316345 (Counterclockwise)
Preceding gene: 66044414
Following gene: 66044412
Centisome position: 21.61
GC content: 62.88
Gene sequence:
>396_bases ATGGACATCAACCTCCCCCACGTGGTCGCTGAAGTGACCCACGCCTTTCACGACTACGAACGCGCCCTGCTGGCCAATGA ACTGAGCACGCTGGATGCGTATTTCTGGAATTCCGAACAGACCGTCCGCTACGGCGTCGCCGAGAACCTGCATGGCGCCG AGACGATTGCGCGCTATCGACGCCAGTGTCAGCCGGTGGGACCGGGCCGCACGCTGCTGCGCACCGTGGTGAGCACCTTC GGTGAAGACTTCGCCACGGTCAGTACCGAGTTTCATGATGGCGTCACCCAGCGCCTTGGCCGGCAGATGCAGACCTGGGC GCGACTGGATGGCGGCTGGAAAGTCGTTGCCGCACATGTCAGCATTGACCTGAGCAGCCTGGAGCCACGCCCTTGA
Upstream 100 bases:
>100_bases AGGCCACGCTGGAGATGATCACCGCACAAGGCGGGATCGTCGGCCGGGTTGCCTCGTTGACGGACCTGGAGCAGGCGCTG CAGACAAGGAGCACACACTG
Downstream 100 bases:
>100_bases ATTCCCCGAACACCACCAACGCGCTGGCTGAAGACGTCTATCGGCGGCTCAAGCAGGAGATTTTCGACTTCTACCTGCTG CCCTACGACCGCTTCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MDINLPHVVAEVTHAFHDYERALLANELSTLDAYFWNSEQTVRYGVAENLHGAETIARYRRQCQPVGPGRTLLRTVVSTF GEDFATVSTEFHDGVTQRLGRQMQTWARLDGGWKVVAAHVSIDLSSLEPRP
Sequences:
>Translated_131_residues MDINLPHVVAEVTHAFHDYERALLANELSTLDAYFWNSEQTVRYGVAENLHGAETIARYRRQCQPVGPGRTLLRTVVSTF GEDFATVSTEFHDGVTQRLGRQMQTWARLDGGWKVVAAHVSIDLSSLEPRP >Mature_131_residues MDINLPHVVAEVTHAFHDYERALLANELSTLDAYFWNSEQTVRYGVAENLHGAETIARYRRQCQPVGPGRTLLRTVVSTF GEDFATVSTEFHDGVTQRLGRQMQTWARLDGGWKVVAAHVSIDLSSLEPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14753; Mature: 14753
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDINLPHVVAEVTHAFHDYERALLANELSTLDAYFWNSEQTVRYGVAENLHGAETIARYR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHH RQCQPVGPGRTLLRTVVSTFGEDFATVSTEFHDGVTQRLGRQMQTWARLDGGWKVVAAHV HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE SIDLSSLEPRP EEECCCCCCCC >Mature Secondary Structure MDINLPHVVAEVTHAFHDYERALLANELSTLDAYFWNSEQTVRYGVAENLHGAETIARYR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHH RQCQPVGPGRTLLRTVVSTFGEDFATVSTEFHDGVTQRLGRQMQTWARLDGGWKVVAAHV HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE SIDLSSLEPRP EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA