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The map label for this gene is 66044407

Identifier: 66044407

GI number: 66044407

Start: 1306913

End: 1308652

Strand: Direct

Name: 66044407

Synonym: Psyr_1156

Alternate gene names: NA

Gene position: 1306913-1308652 (Clockwise)

Preceding gene: 66044405

Following gene: 66044409

Centisome position: 21.45

GC content: 56.78

Gene sequence:

>1740_bases
ATGAATCTGTCACTCAAAAAACTGGCTGCCTCCACCTTGATCCTGGCCAGTCTCTCGTCGTTCGCCAGTCTGGCAAACGC
CACTGTCACTGCACAACAGAGCGCCGTCATCCTCAAGACGTTCAGTGATACGTCGGTAAAGGATTTCAGGCAGTTTCTGA
ACAGTCTGGCCAACGCTGATGTGGTTAAAACTGCCGATTTTGGCCCGGCCATCAGTGCCTTTCTCGATAACAAACCACTT
TCCGCAGCGCAACAAAACGATATTCATCGCCTGCTCGGTCTGTATACCCGCATGAAGTACGGCAGCGCGGCGACTGAAAC
CCTGCGTGAGCTGGTGGCGATTCCCACGGTTCGTGTCGACGGCGTTGCCCAGCACGAAAACCCGGCGTTCATAAAGATTG
CCGACAAGATCAAGAGCCTTGCCGAAGGCTTCGATCTGAAGTTTCGTAACGTCGATAACCGTGTGTATGAAGTGTCGCTC
GACGGGGCCAGTGATGAAGTGGTGGGCATTCATGTGCATGCCGATGTTGTACCGGTCACGCTGGACAACTGGGTCTTGCC
TGACGGCACTCGTCTGGACCCGTTCAAGGTGACGTTGATCGGTGATCGCATGTACGGGCGCGGTACCGAAGACGACAAGA
ACGGTATTGTGGTGGCGCTCTATGCCATGAAAGTCATCAAGGAAGAAAAACTGCCGCTGGCCAGAAACTTCAAGCTGCTG
ATCGATACCACGGAAGAAACCGCCGGCGACGCCATCCCTTACTATTTTGAGCGTAACCCGACGCCTGCCTACAACCTGGC
GCTGGATGGCGGTTATCCCGTTGTGATCGCAGAAAAAGGTTACGGCACGGTCATGGCCAGCTTTGCCCGACGCCAGGCAG
AAGGCGAGGGTGCCGAGATCGTTTCAATGACCGGGGGTATGGCCACCAATCAGATTCCATCGAAGTCGGTCGCCACTCTG
CTGACCGACAAACCTGCCGAGCTTGCTGCCAGTCTGCAACAGGCCGGAGCCGAGTACGTGAAAAGCAATGGCGGTGACTT
CGAGGTCGATGCCAGGGTCGACGGCAAGGACGTCAAACTGACCGTGACCGGCGTATCCGCACACTCATCGGCGCCCCAGT
CCGGGGTCAATCCGGTCGCGAGGATGCTGGATTTCATCAACAGCCTGCAGGGCAAGGTGGCGCTCAAACATAACCAGATC
ACCGACGCTGCTCGCTATGCCGCCGACAACTGGGGGCTCGATTACCTGGGCAGCAAGTTGGGCGTCGGGTTCTCCGACGA
CTTCATGGGGCCTCTGACCGCATCACTGACGTACGTCGCAATGGATGAAAAGGCATTCAAGCTTGCGGTCAATCTGCGCG
TGCCGAAGGGCAAGTCCCCACAGGTGCTCAAATCCGAAATCGCCGAAAAGCTGGCGGCCTGGAGTACGAAAACCGCGATC
AAGCCAGCGTTCGACTATTCCATTGCCGAGCCGATGTACCGCAATCCCGAGGGTGAGTGGGTCAAGGCGCTGCTCGCTGT
CGCCAGTGAAAATCTCGGTATGGAACACACCTTTGGCACGTCGGCTGGCGCGACGTCGGTCCATTCATTACCCAACGGTG
TGCAGTTCGGTCTGGCGAGACCCGAAGTCAAATACACCGGTCATACGGATAACGAGTTCAAGACCACCGGGCAGTTCTTG
CTGGATCTGCAGATCGTCACCGAGATGATGGGGCGTATCGGACAACTGCCAAAGCTCTGA

Upstream 100 bases:

>100_bases
ACAGGGATTCTCGCATCATTGCTCTTGGTGTAAGTTGAAAAGCTTGCTGATCAAACGATCAGAACATTCGCGCTTTGCTT
GCCAAGGAATGCCTTCAATA

Downstream 100 bases:

>100_bases
CACGATTTCCGGGCCTGTTGCAATGACAGGCCCGGGTTCAATGCGCAGGCAAACGAGGCGGGCAACGAGTAAAACCAAGT
CTTGGTCTAAGCGCATTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MNLSLKKLAASTLILASLSSFASLANATVTAQQSAVILKTFSDTSVKDFRQFLNSLANADVVKTADFGPAISAFLDNKPL
SAAQQNDIHRLLGLYTRMKYGSAATETLRELVAIPTVRVDGVAQHENPAFIKIADKIKSLAEGFDLKFRNVDNRVYEVSL
DGASDEVVGIHVHADVVPVTLDNWVLPDGTRLDPFKVTLIGDRMYGRGTEDDKNGIVVALYAMKVIKEEKLPLARNFKLL
IDTTEETAGDAIPYYFERNPTPAYNLALDGGYPVVIAEKGYGTVMASFARRQAEGEGAEIVSMTGGMATNQIPSKSVATL
LTDKPAELAASLQQAGAEYVKSNGGDFEVDARVDGKDVKLTVTGVSAHSSAPQSGVNPVARMLDFINSLQGKVALKHNQI
TDAARYAADNWGLDYLGSKLGVGFSDDFMGPLTASLTYVAMDEKAFKLAVNLRVPKGKSPQVLKSEIAEKLAAWSTKTAI
KPAFDYSIAEPMYRNPEGEWVKALLAVASENLGMEHTFGTSAGATSVHSLPNGVQFGLARPEVKYTGHTDNEFKTTGQFL
LDLQIVTEMMGRIGQLPKL

Sequences:

>Translated_579_residues
MNLSLKKLAASTLILASLSSFASLANATVTAQQSAVILKTFSDTSVKDFRQFLNSLANADVVKTADFGPAISAFLDNKPL
SAAQQNDIHRLLGLYTRMKYGSAATETLRELVAIPTVRVDGVAQHENPAFIKIADKIKSLAEGFDLKFRNVDNRVYEVSL
DGASDEVVGIHVHADVVPVTLDNWVLPDGTRLDPFKVTLIGDRMYGRGTEDDKNGIVVALYAMKVIKEEKLPLARNFKLL
IDTTEETAGDAIPYYFERNPTPAYNLALDGGYPVVIAEKGYGTVMASFARRQAEGEGAEIVSMTGGMATNQIPSKSVATL
LTDKPAELAASLQQAGAEYVKSNGGDFEVDARVDGKDVKLTVTGVSAHSSAPQSGVNPVARMLDFINSLQGKVALKHNQI
TDAARYAADNWGLDYLGSKLGVGFSDDFMGPLTASLTYVAMDEKAFKLAVNLRVPKGKSPQVLKSEIAEKLAAWSTKTAI
KPAFDYSIAEPMYRNPEGEWVKALLAVASENLGMEHTFGTSAGATSVHSLPNGVQFGLARPEVKYTGHTDNEFKTTGQFL
LDLQIVTEMMGRIGQLPKL
>Mature_579_residues
MNLSLKKLAASTLILASLSSFASLANATVTAQQSAVILKTFSDTSVKDFRQFLNSLANADVVKTADFGPAISAFLDNKPL
SAAQQNDIHRLLGLYTRMKYGSAATETLRELVAIPTVRVDGVAQHENPAFIKIADKIKSLAEGFDLKFRNVDNRVYEVSL
DGASDEVVGIHVHADVVPVTLDNWVLPDGTRLDPFKVTLIGDRMYGRGTEDDKNGIVVALYAMKVIKEEKLPLARNFKLL
IDTTEETAGDAIPYYFERNPTPAYNLALDGGYPVVIAEKGYGTVMASFARRQAEGEGAEIVSMTGGMATNQIPSKSVATL
LTDKPAELAASLQQAGAEYVKSNGGDFEVDARVDGKDVKLTVTGVSAHSSAPQSGVNPVARMLDFINSLQGKVALKHNQI
TDAARYAADNWGLDYLGSKLGVGFSDDFMGPLTASLTYVAMDEKAFKLAVNLRVPKGKSPQVLKSEIAEKLAAWSTKTAI
KPAFDYSIAEPMYRNPEGEWVKALLAVASENLGMEHTFGTSAGATSVHSLPNGVQFGLARPEVKYTGHTDNEFKTTGQFL
LDLQIVTEMMGRIGQLPKL

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010964
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 62395; Mature: 62395

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSLKKLAASTLILASLSSFASLANATVTAQQSAVILKTFSDTSVKDFRQFLNSLANAD
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCC
VVKTADFGPAISAFLDNKPLSAAQQNDIHRLLGLYTRMKYGSAATETLRELVAIPTVRVD
EEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEC
GVAQHENPAFIKIADKIKSLAEGFDLKFRNVDNRVYEVSLDGASDEVVGIHVHADVVPVT
CCEECCCCCEEEEHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCEEEEEEECCEEEEE
LDNWVLPDGTRLDPFKVTLIGDRMYGRGTEDDKNGIVVALYAMKVIKEEKLPLARNFKLL
ECCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCEEE
IDTTEETAGDAIPYYFERNPTPAYNLALDGGYPVVIAEKGYGTVMASFARRQAEGEGAEI
EECCHHCCCCCCCEEEECCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCEE
VSMTGGMATNQIPSKSVATLLTDKPAELAASLQQAGAEYVKSNGGDFEVDARVDGKDVKL
EEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEE
TVTGVSAHSSAPQSGVNPVARMLDFINSLQGKVALKHNQITDAARYAADNWGLDYLGSKL
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCHHHHHHHH
GVGFSDDFMGPLTASLTYVAMDEKAFKLAVNLRVPKGKSPQVLKSEIAEKLAAWSTKTAI
CCCCCCCCCCCHHHCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
KPAFDYSIAEPMYRNPEGEWVKALLAVASENLGMEHTFGTSAGATSVHSLPNGVQFGLAR
CCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEECCCC
PEVKYTGHTDNEFKTTGQFLLDLQIVTEMMGRIGQLPKL
CCEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNLSLKKLAASTLILASLSSFASLANATVTAQQSAVILKTFSDTSVKDFRQFLNSLANAD
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCC
VVKTADFGPAISAFLDNKPLSAAQQNDIHRLLGLYTRMKYGSAATETLRELVAIPTVRVD
EEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEC
GVAQHENPAFIKIADKIKSLAEGFDLKFRNVDNRVYEVSLDGASDEVVGIHVHADVVPVT
CCEECCCCCEEEEHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCEEEEEEECCEEEEE
LDNWVLPDGTRLDPFKVTLIGDRMYGRGTEDDKNGIVVALYAMKVIKEEKLPLARNFKLL
ECCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCEEE
IDTTEETAGDAIPYYFERNPTPAYNLALDGGYPVVIAEKGYGTVMASFARRQAEGEGAEI
EECCHHCCCCCCCEEEECCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCEE
VSMTGGMATNQIPSKSVATLLTDKPAELAASLQQAGAEYVKSNGGDFEVDARVDGKDVKL
EEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEE
TVTGVSAHSSAPQSGVNPVARMLDFINSLQGKVALKHNQITDAARYAADNWGLDYLGSKL
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCHHHHHHHH
GVGFSDDFMGPLTASLTYVAMDEKAFKLAVNLRVPKGKSPQVLKSEIAEKLAAWSTKTAI
CCCCCCCCCCCHHHCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
KPAFDYSIAEPMYRNPEGEWVKALLAVASENLGMEHTFGTSAGATSVHSLPNGVQFGLAR
CCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEECCCC
PEVKYTGHTDNEFKTTGQFLLDLQIVTEMMGRIGQLPKL
CCEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA