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The map label for this gene is yibD [C]

Identifier: 66044397

GI number: 66044397

Start: 1297436

End: 1298320

Strand: Direct

Name: yibD [C]

Synonym: Psyr_1146

Alternate gene names: 66044397

Gene position: 1297436-1298320 (Clockwise)

Preceding gene: 66044396

Following gene: 66044398

Centisome position: 21.29

GC content: 54.35

Gene sequence:

>885_bases
ATGATGTCTTCAGAAAGTCAAAACCTCTCGCCCAGCCCTTTGGTTTCCATCGTAGCCCCTTGCTACAACGCCGAGCGATT
TCTTGAGGTCGCGATTCAGAGCATCTTTGCTCAGGACTACAAGAATTTCGAGGTCATCGTCGTCGACGATGGTTCTACCG
ACAACAGCATCGCCATGCTCGAGTCCCTGCAGCAACGCTATCCGTTCCAGCTCTACCGCCAGGCCAATCAGGGCGTCAGT
GCTGCCCTCAACCATGGTCTGCGTTACGCCAAAGGCGTTTACCTTTCCACGCCGGACCTGGATGACATCATGCTTCCCTC
TTCGGTGCGTATCCGTGCCGAGTACCTCGATGAGCATCCCGCAGTAGGCTGTGTCGGCGCATTGGTCAGCTACATGGATG
GTGACGGCAAGGAAATAAAACGTCAGTCGCGCGATTACATCGAGCGGCTGACGTTCGACGACATATTGCGCGACGCGGTG
GTCGTCGGTGCGCCGGTTGCTCTGTACCGCATGAAGGCCATCAAGGATGCAAACGGTTATGACCCGCAGATAAGGGTTCA
GGATTTTCAGGCGACACTGAAAATCGCTCATCTGGGCTATGAAATTCATGTGCTCCCCGAGATCGTCACGCGCTATCGAC
GTCACCCGAACAACCTTTCACGCAAGTACAAGGTGTTGCTTGAGGCTGACCTGAAAAGCATCGAGCCTTATCGGGATCAT
CGCGAATACCAGAGCGGTCGAACTCAGGCCATCAACAAAGCCTTGAAATACGCCGCGGTTGCGGACAAGCGATATGCCTG
GAGTCTGTTGTTTTCCATCCCATGGAGGCAGATCAACAGAACGACCTTGCGGCGCTGCAAGCGTTTGCTGTTGAGCTATC
GATAA

Upstream 100 bases:

>100_bases
ACAGGAGCGCTTGCCCCATGATGTGCCGTTTTCAAGCGACCCGTTACAGATATCCGGTTTCCAAGCCCGTCAGGGCTGAT
CATGATTATGGCTGCTATCC

Downstream 100 bases:

>100_bases
GTGCGGCCTGGCTGTCCAAAAAAAATGTGATTGAAGATATGAAATTCATCGAGCTGTTGAAAAATAGAAAAATACGCAGA
CAGTTGCGCAAGATGGACAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MMSSESQNLSPSPLVSIVAPCYNAERFLEVAIQSIFAQDYKNFEVIVVDDGSTDNSIAMLESLQQRYPFQLYRQANQGVS
AALNHGLRYAKGVYLSTPDLDDIMLPSSVRIRAEYLDEHPAVGCVGALVSYMDGDGKEIKRQSRDYIERLTFDDILRDAV
VVGAPVALYRMKAIKDANGYDPQIRVQDFQATLKIAHLGYEIHVLPEIVTRYRRHPNNLSRKYKVLLEADLKSIEPYRDH
REYQSGRTQAINKALKYAAVADKRYAWSLLFSIPWRQINRTTLRRCKRLLLSYR

Sequences:

>Translated_294_residues
MMSSESQNLSPSPLVSIVAPCYNAERFLEVAIQSIFAQDYKNFEVIVVDDGSTDNSIAMLESLQQRYPFQLYRQANQGVS
AALNHGLRYAKGVYLSTPDLDDIMLPSSVRIRAEYLDEHPAVGCVGALVSYMDGDGKEIKRQSRDYIERLTFDDILRDAV
VVGAPVALYRMKAIKDANGYDPQIRVQDFQATLKIAHLGYEIHVLPEIVTRYRRHPNNLSRKYKVLLEADLKSIEPYRDH
REYQSGRTQAINKALKYAAVADKRYAWSLLFSIPWRQINRTTLRRCKRLLLSYR
>Mature_294_residues
MMSSESQNLSPSPLVSIVAPCYNAERFLEVAIQSIFAQDYKNFEVIVVDDGSTDNSIAMLESLQQRYPFQLYRQANQGVS
AALNHGLRYAKGVYLSTPDLDDIMLPSSVRIRAEYLDEHPAVGCVGALVSYMDGDGKEIKRQSRDYIERLTFDDILRDAV
VVGAPVALYRMKAIKDANGYDPQIRVQDFQATLKIAHLGYEIHVLPEIVTRYRRHPNNLSRKYKVLLEADLKSIEPYRDH
REYQSGRTQAINKALKYAAVADKRYAWSLLFSIPWRQINRTTLRRCKRLLLSYR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=100, Percent_Identity=34, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787259, Length=125, Percent_Identity=34.4, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 33729; Mature: 33729

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSESQNLSPSPLVSIVAPCYNAERFLEVAIQSIFAQDYKNFEVIVVDDGSTDNSIAML
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
ESLQQRYPFQLYRQANQGVSAALNHGLRYAKGVYLSTPDLDDIMLPSSVRIRAEYLDEHP
HHHHHHCCHHHHHHHCCCHHHHHHHCHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCCC
AVGCVGALVSYMDGDGKEIKRQSRDYIERLTFDDILRDAVVVGAPVALYRMKAIKDANGY
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
DPQIRVQDFQATLKIAHLGYEIHVLPEIVTRYRRHPNNLSRKYKVLLEADLKSIEPYRDH
CCCEEEHHHHHHHHHHHHCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH
REYQSGRTQAINKALKYAAVADKRYAWSLLFSIPWRQINRTTLRRCKRLLLSYR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSSESQNLSPSPLVSIVAPCYNAERFLEVAIQSIFAQDYKNFEVIVVDDGSTDNSIAML
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
ESLQQRYPFQLYRQANQGVSAALNHGLRYAKGVYLSTPDLDDIMLPSSVRIRAEYLDEHP
HHHHHHCCHHHHHHHCCCHHHHHHHCHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCCC
AVGCVGALVSYMDGDGKEIKRQSRDYIERLTFDDILRDAVVVGAPVALYRMKAIKDANGY
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
DPQIRVQDFQATLKIAHLGYEIHVLPEIVTRYRRHPNNLSRKYKVLLEADLKSIEPYRDH
CCCEEEHHHHHHHHHHHHCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH
REYQSGRTQAINKALKYAAVADKRYAWSLLFSIPWRQINRTTLRRCKRLLLSYR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]