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The map label for this gene is alg8 [H]

Identifier: 66044315

GI number: 66044315

Start: 1203142

End: 1204623

Strand: Reverse

Name: alg8 [H]

Synonym: Psyr_1062

Alternate gene names: 66044315

Gene position: 1204623-1203142 (Counterclockwise)

Preceding gene: 66044316

Following gene: 66044314

Centisome position: 19.77

GC content: 58.97

Gene sequence:

>1482_bases
ATGCAGAGGCTCAAGCACGGCCTGTTACAGGCCGCAGGTTGGCTGTTCTATTTAAGTTTACTCATGGGCCTTGCCGCGGC
ATTGCCTACCAGTATCTTCGACTCACAGTCGAAGAACTTTATATTCCTGATTGGCGCCGTTGGTATCTGGCGCTACTCGA
TGGGGATCACGCACTTCGTGCGCGGGATGATTTTCCTGTACATCGTCTACCCGCACTTGCGCCGCAAGGTTCGCAAGCTG
GGCAGCGCAGCAGACCCGTCCCATGTGTTTCTGATGGTCACCAGCTTTCGTATCGACGCGCTGACCACCGCACAGGTCTA
CAACTCGGTTATCCGCGAAGCCATCGACTGCGGCCTGCCGACGACGATCGTCTGCTCGCTGGTGGAAATGTCCGATGAGC
TGCTGGTCAAGAGCATGTGGGCCAAGTTCAATCCGCCGGAGCGCGTCAAGCTGGACTTCGTACGCATCCCGGGCACCGGC
AAGCGCGATGGTCTGGCCTATGGCTTCCGCGCAATCTCGCGTCACTTGCCTGACAGCCGTGCCGTGGTTGCGGTGATCGA
CGGTGACACCGTGCTCAACGAAGGTGTGGTCGCCAAGACCGTACCGTGGTTCCAGCTGTTCGACAATGTCGGCGGCCTGA
CCACCAACGAGTTCTGTGAAGTGCGTGGCGGCTACATCATGAGCGAGTGGCACAAGCTGCGTTTCGCTCAGCGTCACATC
AACATGTGCTCGATGGCCCTGTCCAAACGCGTGTTGACCATGACCGGTCGCATGTCGGTGTTCCGCGCAACCGTGGTAAC
CGACCCCGAGTTCATTGCCGACGTGGAAAGCGACTCGCTCAATCACTGGCGTCTGGGCACCTTCCGCTTCCTGACCGGCG
ACGACAAGTCCAGCTGGTTCAGCCTGATGCGCCTGGGTTACGACACGTTCTACGTGCCGGACGCAGCGATCAACACCGTG
GAACACCCGCCCGAGAAGAGCTTCCTGAAAGCGAGCCGCAAGCTGATGTATCGCTGGTACGGCAACAACCTGCGTCAGAA
CTCGCGTGCACTGGGTCTGGGCGTACGTCGCCTGGGGATCTTCACCAGCATCGTGCTGTTTGACCAGCGTGTGTCGATGT
GGACCTCCATTCTTGGTCTGACCGTCGCCCTGATCGCCAGCTTCAAGTATGGCGGCGCGTTCCTGCTGATGTATCTGCTG
TGGATCGGCATGACCCGCCTGATCCTCACCCTGCTGCTGTCCCTCTCGGGACACAGGATCGGGCCTGCCTACCCGATCAT
TCTCTATTACAACCAGATCGTCGGTGCGCTGATGAAGATCTATGTCTTCTTCCGCCTGGACCGCCAGTCCTGGACTCGCC
AGGACACCAAACTAAGCCGCGACATGGCCAGCTTTCAGGGCTGGTTCAACACGTGGTCGTCCCGAACCATGACTTTCTCG
GCTGGCACCATCTTCGTCGCTGTGCTGTTGACGATGGTTTGA

Upstream 100 bases:

>100_bases
ATCAGCCGCAAGCCACAAGCGCCAGGCTCCAGGCCACAGGCTCAAGCAATGTGCTTGCAGCCTGGGGCTTGAGGCTCGCA
ACTGACTTAGGGATACGATT

Downstream 100 bases:

>100_bases
CCGGGCCAACGGATTAATCGCTTAAGTAGGAAAAATAGCCATGAATACAGCCGTGAATGCGAACGTCGTACATGAATCCG
AAGCCCAGCGCCAACACGCG

Product: alginate biosynthesis protein Alg8

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MQRLKHGLLQAAGWLFYLSLLMGLAAALPTSIFDSQSKNFIFLIGAVGIWRYSMGITHFVRGMIFLYIVYPHLRRKVRKL
GSAADPSHVFLMVTSFRIDALTTAQVYNSVIREAIDCGLPTTIVCSLVEMSDELLVKSMWAKFNPPERVKLDFVRIPGTG
KRDGLAYGFRAISRHLPDSRAVVAVIDGDTVLNEGVVAKTVPWFQLFDNVGGLTTNEFCEVRGGYIMSEWHKLRFAQRHI
NMCSMALSKRVLTMTGRMSVFRATVVTDPEFIADVESDSLNHWRLGTFRFLTGDDKSSWFSLMRLGYDTFYVPDAAINTV
EHPPEKSFLKASRKLMYRWYGNNLRQNSRALGLGVRRLGIFTSIVLFDQRVSMWTSILGLTVALIASFKYGGAFLLMYLL
WIGMTRLILTLLLSLSGHRIGPAYPIILYYNQIVGALMKIYVFFRLDRQSWTRQDTKLSRDMASFQGWFNTWSSRTMTFS
AGTIFVAVLLTMV

Sequences:

>Translated_493_residues
MQRLKHGLLQAAGWLFYLSLLMGLAAALPTSIFDSQSKNFIFLIGAVGIWRYSMGITHFVRGMIFLYIVYPHLRRKVRKL
GSAADPSHVFLMVTSFRIDALTTAQVYNSVIREAIDCGLPTTIVCSLVEMSDELLVKSMWAKFNPPERVKLDFVRIPGTG
KRDGLAYGFRAISRHLPDSRAVVAVIDGDTVLNEGVVAKTVPWFQLFDNVGGLTTNEFCEVRGGYIMSEWHKLRFAQRHI
NMCSMALSKRVLTMTGRMSVFRATVVTDPEFIADVESDSLNHWRLGTFRFLTGDDKSSWFSLMRLGYDTFYVPDAAINTV
EHPPEKSFLKASRKLMYRWYGNNLRQNSRALGLGVRRLGIFTSIVLFDQRVSMWTSILGLTVALIASFKYGGAFLLMYLL
WIGMTRLILTLLLSLSGHRIGPAYPIILYYNQIVGALMKIYVFFRLDRQSWTRQDTKLSRDMASFQGWFNTWSSRTMTFS
AGTIFVAVLLTMV
>Mature_493_residues
MQRLKHGLLQAAGWLFYLSLLMGLAAALPTSIFDSQSKNFIFLIGAVGIWRYSMGITHFVRGMIFLYIVYPHLRRKVRKL
GSAADPSHVFLMVTSFRIDALTTAQVYNSVIREAIDCGLPTTIVCSLVEMSDELLVKSMWAKFNPPERVKLDFVRIPGTG
KRDGLAYGFRAISRHLPDSRAVVAVIDGDTVLNEGVVAKTVPWFQLFDNVGGLTTNEFCEVRGGYIMSEWHKLRFAQRHI
NMCSMALSKRVLTMTGRMSVFRATVVTDPEFIADVESDSLNHWRLGTFRFLTGDDKSSWFSLMRLGYDTFYVPDAAINTV
EHPPEKSFLKASRKLMYRWYGNNLRQNSRALGLGVRRLGIFTSIVLFDQRVSMWTSILGLTVALIASFKYGGAFLLMYLL
WIGMTRLILTLLLSLSGHRIGPAYPIILYYNQIVGALMKIYVFFRLDRQSWTRQDTKLSRDMASFQGWFNTWSSRTMTFS
AGTIFVAVLLTMV

Specific function: Possibly a processive enzyme that polymerizes GDP- mannuronic acid [H]

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56003; Mature: 56003

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLKHGLLQAAGWLFYLSLLMGLAAALPTSIFDSQSKNFIFLIGAVGIWRYSMGITHFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH
RGMIFLYIVYPHLRRKVRKLGSAADPSHVFLMVTSFRIDALTTAQVYNSVIREAIDCGLP
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
TTIVCSLVEMSDELLVKSMWAKFNPPERVKLDFVRIPGTGKRDGLAYGFRAISRHLPDSR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
AVVAVIDGDTVLNEGVVAKTVPWFQLFDNVGGLTTNEFCEVRGGYIMSEWHKLRFAQRHI
EEEEEECCCHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
NMCSMALSKRVLTMTGRMSVFRATVVTDPEFIADVESDSLNHWRLGTFRFLTGDDKSSWF
HHHHHHHHHHHHHHHCCHHHHEEEEECCHHHHHCCCCCCCCCEECEEEEEEECCCHHHHH
SLMRLGYDTFYVPDAAINTVEHPPEKSFLKASRKLMYRWYGNNLRQNSRALGLGVRRLGI
HHHHHCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHH
FTSIVLFDQRVSMWTSILGLTVALIASFKYGGAFLLMYLLWIGMTRLILTLLLSLSGHRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPAYPIILYYNQIVGALMKIYVFFRLDRQSWTRQDTKLSRDMASFQGWFNTWSSRTMTFS
CCCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AGTIFVAVLLTMV
HHHHHHHHHHHHC
>Mature Secondary Structure
MQRLKHGLLQAAGWLFYLSLLMGLAAALPTSIFDSQSKNFIFLIGAVGIWRYSMGITHFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH
RGMIFLYIVYPHLRRKVRKLGSAADPSHVFLMVTSFRIDALTTAQVYNSVIREAIDCGLP
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
TTIVCSLVEMSDELLVKSMWAKFNPPERVKLDFVRIPGTGKRDGLAYGFRAISRHLPDSR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
AVVAVIDGDTVLNEGVVAKTVPWFQLFDNVGGLTTNEFCEVRGGYIMSEWHKLRFAQRHI
EEEEEECCCHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
NMCSMALSKRVLTMTGRMSVFRATVVTDPEFIADVESDSLNHWRLGTFRFLTGDDKSSWF
HHHHHHHHHHHHHHHCCHHHHEEEEECCHHHHHCCCCCCCCCEECEEEEEEECCCHHHHH
SLMRLGYDTFYVPDAAINTVEHPPEKSFLKASRKLMYRWYGNNLRQNSRALGLGVRRLGI
HHHHHCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHH
FTSIVLFDQRVSMWTSILGLTVALIASFKYGGAFLLMYLLWIGMTRLILTLLLSLSGHRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPAYPIILYYNQIVGALMKIYVFFRLDRQSWTRQDTKLSRDMASFQGWFNTWSSRTMTFS
CCCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AGTIFVAVLLTMV
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]