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The map label for this gene is alg44 [H]

Identifier: 66044314

GI number: 66044314

Start: 1201929

End: 1203101

Strand: Reverse

Name: alg44 [H]

Synonym: Psyr_1061

Alternate gene names: 66044314

Gene position: 1203101-1201929 (Counterclockwise)

Preceding gene: 66044315

Following gene: 66044313

Centisome position: 19.74

GC content: 61.04

Gene sequence:

>1173_bases
ATGAATACAGCCGTGAATGCGAACGTCGTACATGAATCCGAAGCCCAGCGCCAACACGCGCGGATCAAGATCCCTGCCAA
GCTGCGCCTGCTGAATGATCAGCCTAACGCGCCACTGGTACGTGTCGAAGACCTGTCGGCCGGCGGCCTGAGCTTCGTTG
CTCCGTCCGGGCAGAAATTCAGCGAAGGTCAGATCGTCAAGGGACGCCTGCAATTCATCATCGACAACCTTGGCCTGGCC
ATGGACGTCGACCTGCAAGTGCGCTCGATCGACAACGCCAGCAACCGCATCGGTTGCCAGTTCCAGAACCTGGAACCGCA
GGACATCGCTACCCTGCGCCATCTGATCACCTCGCACCTGTCCGGCGAAGTCGTGACCCTGGGCGAAGTGCTGGCCACGC
TGCAGCGCGACAACTTCACCAAGGCACGCAAGGTCAAGGGCAAGGACGGCGGCATGAGCGCCATGGGTCGCCTGCGCGCT
GTGACCTTCAGCCTGGGCGTGTTCATTGTCGGTCTGGCCGCTTTCGGTTTTATCTTCAAGACGATCTACGGCCTGTACTT
CGTCAGCCATGCATCGGCTGGTCTGGTCACCATTCCAAGCATGGACGTGACCATGCCGCGTGAAGGTACCGTGCAAAGCC
TGGTCGCCCCGAACGGCGAAGCCGCCAAAGGCGCACCACTGGCGTCCTTCAACACCAGCATGCTGGAAATGCTCAAGGGC
AGCCTGACCGGTGAAGACCTGCAGCCAGCCAAGATCGAAGAGCTGTATGGCAAGCAGATGAGCGGCACCATGACCAGCCC
GTGCGATTGCGTCGTGGCTCGCCAACTGGTGGCCGACGGTCAGTTCGCGTCCAAGGGTCAGGTGATCTTCCAACTGGTGC
CACGCAACGCGCCGGCCACGGTTGAAGCACGCTTCACCTATCGCCAGTTCAACGACGTCAAGCCAGGCACACGTGTCAGC
TTCCAGATCGCTGGCGAAGACAAACTGCGCACCGGCCAGATCGTCAGCAGCACCAACCTGAGCGACGCCGACCTGTCGAC
CGACATCCGCGTGCAGATCAAGCCTGACGAAAGCCTGAGCAGCTCGCTTGCCGGTCGCCCTGTCGAAGTGGTCAGCGATC
GCGGCCCGTCCGTGAACTGGCTGATCGATAAAGCCATGGCTGCGGGTCTGTAA

Upstream 100 bases:

>100_bases
CGAACCATGACTTTCTCGGCTGGCACCATCTTCGTCGCTGTGCTGTTGACGATGGTTTGACCGGGCCAACGGATTAATCG
CTTAAGTAGGAAAAATAGCC

Downstream 100 bases:

>100_bases
CCATGAACAGCCCACTACGACGCCTGTCGACCCCCACGCTATTGAGCCTCGCCGTCGCGCTCGGCCTGAGCGGCTGTGCC
GGCCTGCCTGATCAACGCCT

Product: alginate biosynthesis protein Alg44

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MNTAVNANVVHESEAQRQHARIKIPAKLRLLNDQPNAPLVRVEDLSAGGLSFVAPSGQKFSEGQIVKGRLQFIIDNLGLA
MDVDLQVRSIDNASNRIGCQFQNLEPQDIATLRHLITSHLSGEVVTLGEVLATLQRDNFTKARKVKGKDGGMSAMGRLRA
VTFSLGVFIVGLAAFGFIFKTIYGLYFVSHASAGLVTIPSMDVTMPREGTVQSLVAPNGEAAKGAPLASFNTSMLEMLKG
SLTGEDLQPAKIEELYGKQMSGTMTSPCDCVVARQLVADGQFASKGQVIFQLVPRNAPATVEARFTYRQFNDVKPGTRVS
FQIAGEDKLRTGQIVSSTNLSDADLSTDIRVQIKPDESLSSSLAGRPVEVVSDRGPSVNWLIDKAMAAGL

Sequences:

>Translated_390_residues
MNTAVNANVVHESEAQRQHARIKIPAKLRLLNDQPNAPLVRVEDLSAGGLSFVAPSGQKFSEGQIVKGRLQFIIDNLGLA
MDVDLQVRSIDNASNRIGCQFQNLEPQDIATLRHLITSHLSGEVVTLGEVLATLQRDNFTKARKVKGKDGGMSAMGRLRA
VTFSLGVFIVGLAAFGFIFKTIYGLYFVSHASAGLVTIPSMDVTMPREGTVQSLVAPNGEAAKGAPLASFNTSMLEMLKG
SLTGEDLQPAKIEELYGKQMSGTMTSPCDCVVARQLVADGQFASKGQVIFQLVPRNAPATVEARFTYRQFNDVKPGTRVS
FQIAGEDKLRTGQIVSSTNLSDADLSTDIRVQIKPDESLSSSLAGRPVEVVSDRGPSVNWLIDKAMAAGL
>Mature_390_residues
MNTAVNANVVHESEAQRQHARIKIPAKLRLLNDQPNAPLVRVEDLSAGGLSFVAPSGQKFSEGQIVKGRLQFIIDNLGLA
MDVDLQVRSIDNASNRIGCQFQNLEPQDIATLRHLITSHLSGEVVTLGEVLATLQRDNFTKARKVKGKDGGMSAMGRLRA
VTFSLGVFIVGLAAFGFIFKTIYGLYFVSHASAGLVTIPSMDVTMPREGTVQSLVAPNGEAAKGAPLASFNTSMLEMLKG
SLTGEDLQPAKIEELYGKQMSGTMTSPCDCVVARQLVADGQFASKGQVIFQLVPRNAPATVEARFTYRQFNDVKPGTRVS
FQIAGEDKLRTGQIVSSTNLSDADLSTDIRVQIKPDESLSSSLAGRPVEVVSDRGPSVNWLIDKAMAAGL

Specific function: Required for alginate biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PilZ domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009875 [H]

Pfam domain/function: PF07238 PilZ [H]

EC number: NA

Molecular weight: Translated: 41904; Mature: 41904

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAVNANVVHESEAQRQHARIKIPAKLRLLNDQPNAPLVRVEDLSAGGLSFVAPSGQKF
CCCCCCCCEEECCHHHHHHCEEECCEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCCC
SEGQIVKGRLQFIIDNLGLAMDVDLQVRSIDNASNRIGCQFQNLEPQDIATLRHLITSHL
CCCCEEHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHC
SGEVVTLGEVLATLQRDNFTKARKVKGKDGGMSAMGRLRAVTFSLGVFIVGLAAFGFIFK
CCCEEEHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIYGLYFVSHASAGLVTIPSMDVTMPREGTVQSLVAPNGEAAKGAPLASFNTSMLEMLKG
HHHHHHHHHCCCCCEEEECCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC
SLTGEDLQPAKIEELYGKQMSGTMTSPCDCVVARQLVADGQFASKGQVIFQLVPRNAPAT
CCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCE
VEARFTYRQFNDVKPGTRVSFQIAGEDKLRTGQIVSSTNLSDADLSTDIRVQIKPDESLS
EEEEEEEEHHCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCHHHH
SSLAGRPVEVVSDRGPSVNWLIDKAMAAGL
HHHCCCCEEEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNTAVNANVVHESEAQRQHARIKIPAKLRLLNDQPNAPLVRVEDLSAGGLSFVAPSGQKF
CCCCCCCCEEECCHHHHHHCEEECCEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCCC
SEGQIVKGRLQFIIDNLGLAMDVDLQVRSIDNASNRIGCQFQNLEPQDIATLRHLITSHL
CCCCEEHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHC
SGEVVTLGEVLATLQRDNFTKARKVKGKDGGMSAMGRLRAVTFSLGVFIVGLAAFGFIFK
CCCEEEHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIYGLYFVSHASAGLVTIPSMDVTMPREGTVQSLVAPNGEAAKGAPLASFNTSMLEMLKG
HHHHHHHHHCCCCCEEEECCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC
SLTGEDLQPAKIEELYGKQMSGTMTSPCDCVVARQLVADGQFASKGQVIFQLVPRNAPAT
CCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCE
VEARFTYRQFNDVKPGTRVSFQIAGEDKLRTGQIVSSTNLSDADLSTDIRVQIKPDESLS
EEEEEEEEHHCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCHHHH
SSLAGRPVEVVSDRGPSVNWLIDKAMAAGL
HHHCCCCEEEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]