Click here to switch to the map view.

The map label for this gene is yqcA [C]

Identifier: 66044277

GI number: 66044277

Start: 1155042

End: 1155494

Strand: Direct

Name: yqcA [C]

Synonym: Psyr_1024

Alternate gene names: 66044277

Gene position: 1155042-1155494 (Clockwise)

Preceding gene: 66044269

Following gene: 66044278

Centisome position: 18.95

GC content: 62.47

Gene sequence:

>453_bases
ATGAAAGTCGCCATCGTGTGTGGAACGGTCTACGGATCGGCCGAGGAAGTTGCCAGACACGCCGCTGCACTGTTGCGTGC
CGCCGGCCATGAGACCCTCGTCAATCCGCGCCTTATGCTGCCGGATCTGCTCGCCTTTGAGCCTCAGGCGCTCCTTGCTG
TGACGTCGACCACCGGGATGGGCGAGTTGCCCGACAACCTCATGCCTCTTTATGCAGCGCTGCGCGACGGTCTGCCAGGC
GAGCTGCGTGGATTGCCTGGTGGGGTGATCGCACTGGGCGATGCCAGTTACGGCGACACCTTCTGCGCAGGCGGTGAGCA
GATGCGCGAACTGTTCGCTGAGTTGGGCGTTAGCGAAGTGCAGGACATGTTGCGTCTGGACGGAAGCGAAAGCGTCACCC
CGGAAACCGACGCCGAGCCGTGGCTGGAAGCGTTCATCAAGTATCTGGGCTGA

Upstream 100 bases:

>100_bases
TGCTTCTTCGGGCAGACCGAAGGCAGAATGGTCCGTAGAAAATTCAGACGGCATTCTAAGGCATAATGTTTCACTTTTTT
AAGCTGCTGCAGGAATAACC

Downstream 100 bases:

>100_bases
AAATATCGCGCTCCTTTATGGGGAATGATTCAGCACAGCAGGTGTTGATTGTGGCTGTGCAGGGCGTGGACGACACTCAT
CGCAACGTCTTTCTGAGGCA

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKVAIVCGTVYGSAEEVARHAAALLRAAGHETLVNPRLMLPDLLAFEPQALLAVTSTTGMGELPDNLMPLYAALRDGLPG
ELRGLPGGVIALGDASYGDTFCAGGEQMRELFAELGVSEVQDMLRLDGSESVTPETDAEPWLEAFIKYLG

Sequences:

>Translated_150_residues
MKVAIVCGTVYGSAEEVARHAAALLRAAGHETLVNPRLMLPDLLAFEPQALLAVTSTTGMGELPDNLMPLYAALRDGLPG
ELRGLPGGVIALGDASYGDTFCAGGEQMRELFAELGVSEVQDMLRLDGSESVTPETDAEPWLEAFIKYLG
>Mature_150_residues
MKVAIVCGTVYGSAEEVARHAAALLRAAGHETLVNPRLMLPDLLAFEPQALLAVTSTTGMGELPDNLMPLYAALRDGLPG
ELRGLPGGVIALGDASYGDTFCAGGEQMRELFAELGVSEVQDMLRLDGSESVTPETDAEPWLEAFIKYLG

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789154, Length=144, Percent_Identity=43.0555555555556, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI1790181, Length=149, Percent_Identity=34.2281879194631, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 15863; Mature: 15863

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIVCGTVYGSAEEVARHAAALLRAAGHETLVNPRLMLPDLLAFEPQALLAVTSTTGM
CEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHCCHHHHCCCCHHEEEECCCCC
GELPDNLMPLYAALRDGLPGELRGLPGGVIALGDASYGDTFCAGGEQMRELFAELGVSEV
CCCCHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHH
QDMLRLDGSESVTPETDAEPWLEAFIKYLG
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MKVAIVCGTVYGSAEEVARHAAALLRAAGHETLVNPRLMLPDLLAFEPQALLAVTSTTGM
CEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHCCHHHHCCCCHHEEEECCCCC
GELPDNLMPLYAALRDGLPGELRGLPGGVIALGDASYGDTFCAGGEQMRELFAELGVSEV
CCCCHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHH
QDMLRLDGSESVTPETDAEPWLEAFIKYLG
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]