| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yufQ [H]
Identifier: 66044257
GI number: 66044257
Start: 1138407
End: 1139333
Strand: Direct
Name: yufQ [H]
Synonym: Psyr_1004
Alternate gene names: 66044257
Gene position: 1138407-1139333 (Clockwise)
Preceding gene: 66044256
Following gene: 66044258
Centisome position: 18.68
GC content: 66.34
Gene sequence:
>927_bases ATGGAGCTTATTTCCCACTGGCTGGGCAGCGCACCGGATTTTGCCGTGCCGTTCGCCCTGGCAGCGCTTGGCCTGATCCT CATCGAGCGCAGCGGTGTACTGGCACTGGGCGTCGAAGGGCTGATGCTGGTCGGCGCACTGGCGGGCATCGGCATGCAGT TGAGCCTCGGCTCGCCGGGCCTTTCGCTGCTGGCGTCGATGGCGGCGGCAGGTCTGGTGTCGTTGCTGTTTGCGCTGATG GTGCTGGTGTTGCGGATCAACCAGGTGATCGCCGGGCTGGCGCTGGTGTTCTTTTGTCAGGGCTTGACCGGGCTGCTGGG CACGCTGCTGGGCTGGACCAACCGTCCGGTCAGCGGCCTTCAGGCGGTCGAGCTGTGGCCGTTGTCCGAGCTGCCCGTGG TGGGCCGGGTATTTGTGCAGAACCCGCTGGTGTACCTGACCGTGGTGATTTTCATCGCGGTGGTCTGGCTGCTCGATCGC ACGCGCACCGGGCTGCGTTTGCGCGCGGTGGGCGAGAACCCGCAGGCCGCCGATGCCGCAGGTATTTCCGTGCTCGGTTA CCGCCTGGCGGCGATTGTCGCCGGCTCCGCGTTGATGGGGCTGGCCGGCGGTTTCATTGCCGTGCTCAGCACCAAGATGT GGATCGCCGACATGACCGGCGGACGCGGCTGGATCGCGGTTTCACTGGTGATCTTCGCGCGCTGGTCGCCGTGGCGTGCG CTGGCCGGTGCCTTGCTGTTCGGCGGTATCGAGGCGCTGATTCCGCAGTTGGCGGCAACCGGCGTGCGCCTGCCTCAGTA TTTCGTCTTGATGACGCCCTATGCGGTCACCCTGTTGGTCATGGTCTGGGTGGCGAGCGGCAAGCGTCAATCGAGCAGCC AGCCCGGTGCGCTGGGCGAACCCTACATTCGCGAGGAGCGCCGCTGA
Upstream 100 bases:
>100_bases CGATGGTGCAACTGATCCAGGCGATTCTGGTGATCTGCGTCGCGTCGTCGGATTTTTTCATCCGCCATCGTCTGCGGCGC ATTCAGGCAGGAGAACGTTG
Downstream 100 bases:
>100_bases GCGCAGAAGCCCGCAAGACGGGCGGTTCAGCACGGGTTAAGGAATTTTTGATAGCGGGTATGCTCTAATCCGGTTACCAG CGTTCGTCAAAACCAGGAGC
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MELISHWLGSAPDFAVPFALAALGLILIERSGVLALGVEGLMLVGALAGIGMQLSLGSPGLSLLASMAAAGLVSLLFALM VLVLRINQVIAGLALVFFCQGLTGLLGTLLGWTNRPVSGLQAVELWPLSELPVVGRVFVQNPLVYLTVVIFIAVVWLLDR TRTGLRLRAVGENPQAADAAGISVLGYRLAAIVAGSALMGLAGGFIAVLSTKMWIADMTGGRGWIAVSLVIFARWSPWRA LAGALLFGGIEALIPQLAATGVRLPQYFVLMTPYAVTLLVMVWVASGKRQSSSQPGALGEPYIREERR
Sequences:
>Translated_308_residues MELISHWLGSAPDFAVPFALAALGLILIERSGVLALGVEGLMLVGALAGIGMQLSLGSPGLSLLASMAAAGLVSLLFALM VLVLRINQVIAGLALVFFCQGLTGLLGTLLGWTNRPVSGLQAVELWPLSELPVVGRVFVQNPLVYLTVVIFIAVVWLLDR TRTGLRLRAVGENPQAADAAGISVLGYRLAAIVAGSALMGLAGGFIAVLSTKMWIADMTGGRGWIAVSLVIFARWSPWRA LAGALLFGGIEALIPQLAATGVRLPQYFVLMTPYAVTLLVMVWVASGKRQSSSQPGALGEPYIREERR >Mature_308_residues MELISHWLGSAPDFAVPFALAALGLILIERSGVLALGVEGLMLVGALAGIGMQLSLGSPGLSLLASMAAAGLVSLLFALM VLVLRINQVIAGLALVFFCQGLTGLLGTLLGWTNRPVSGLQAVELWPLSELPVVGRVFVQNPLVYLTVVIFIAVVWLLDR TRTGLRLRAVGENPQAADAAGISVLGYRLAAIVAGSALMGLAGGFIAVLSTKMWIADMTGGRGWIAVSLVIFARWSPWRA LAGALLFGGIEALIPQLAATGVRLPQYFVLMTPYAVTLLVMVWVASGKRQSSSQPGALGEPYIREERR
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32425; Mature: 32425
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELISHWLGSAPDFAVPFALAALGLILIERSGVLALGVEGLMLVGALAGIGMQLSLGSPG CCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCEEEECCCCH LSLLASMAAAGLVSLLFALMVLVLRINQVIAGLALVFFCQGLTGLLGTLLGWTNRPVSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QAVELWPLSELPVVGRVFVQNPLVYLTVVIFIAVVWLLDRTRTGLRLRAVGENPQAADAA HHEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH GISVLGYRLAAIVAGSALMGLAGGFIAVLSTKMWIADMTGGRGWIAVSLVIFARWSPWRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHH LAGALLFGGIEALIPQLAATGVRLPQYFVLMTPYAVTLLVMVWVASGKRQSSSQPGALGE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PYIREERR CHHHCCCC >Mature Secondary Structure MELISHWLGSAPDFAVPFALAALGLILIERSGVLALGVEGLMLVGALAGIGMQLSLGSPG CCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCEEEECCCCH LSLLASMAAAGLVSLLFALMVLVLRINQVIAGLALVFFCQGLTGLLGTLLGWTNRPVSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QAVELWPLSELPVVGRVFVQNPLVYLTVVIFIAVVWLLDRTRTGLRLRAVGENPQAADAA HHEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH GISVLGYRLAAIVAGSALMGLAGGFIAVLSTKMWIADMTGGRGWIAVSLVIFARWSPWRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHH LAGALLFGGIEALIPQLAATGVRLPQYFVLMTPYAVTLLVMVWVASGKRQSSSQPGALGE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PYIREERR CHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]