Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yggG [H]

Identifier: 66044237

GI number: 66044237

Start: 1114740

End: 1115588

Strand: Direct

Name: yggG [H]

Synonym: Psyr_0984

Alternate gene names: 66044237

Gene position: 1114740-1115588 (Clockwise)

Preceding gene: 66044236

Following gene: 66044240

Centisome position: 18.29

GC content: 58.42

Gene sequence:

>849_bases
ATGACCGTTTCATACACTAGGAGATACACCATGCGTCCTTCATTTGCCTTCTGTGCCTTGAGCGCTGCGTTGCTGCTCGG
CGGGTGTCAGGCAGTCAATACCACGAGTGGCGACTCGGTCGGTGTGGAGCGCAAACAGTACATGTTCAGCATGCTCTCGA
CGGATGAAGTCAACAAAATGTACGCCCAGTCCTACCAGCAGACCGTTGGCGAGGCGACCAGCAAAGGGGTACTGGACACC
ACCAGCGCAAATGCCAGGCGGGTCCATGCAATCGCCGATCGACTGATTGCCCAGGCGCCCAAATTGCGACCTGATTCGGC
GCAGTGGCAGTGGGAAGTCAACCTGATCAAGAGTGACGAACTGAACGCCAACTGTGGTCCTGGCGGCAAGATCATTGTCT
ACAGCGGCCTGATCGATACCCTCAAACTGACCGACGATGAAATCGCTGCGGTCATGGGCCACGAGATCGCCCATGCGTTG
CGCGAGCACGGGCGTGAAGCGATGTCCAAGGCGTACGGTGTTTCGATGGCCAAGCAGGGCGCAGGCGCCTTGCTGGGATT
GGGTCAGGACAGCCTGGCGTTGGCAGATACCGTGGTCAACTACAGCCTGACGCTGCCCAACAGCCGCAGTAACGAGAACG
AAGCTGATCTGCTCGGTCTGGAACTGGCCGCACGCGCCGGTTACAACCCTAATGCAGCGATCACCCTGTGGCAGAAGATG
ACCCAGAACTCCGGTGGTTCGCAGCCTGAGTTCATGAGCACTCACCCGGCCTCGGAAAGTCGCATCGCCTCGTTGCAGGC
TGCCATACCGAAAGTCATGCCGCTGTACCAGAAAGCCGCTAAATCCTGA

Upstream 100 bases:

>100_bases
CATCTGATACAAACTGGACACACCTGCGGGAACCATCAGCCCCTGTGCAAAGACCAAGATGCCAGCTGGCCGGTATCTGG
CGCAGAGGTCTGCCCCGGGA

Downstream 100 bases:

>100_bases
GTGGATGAGTCGCCCGTAGCGTTGCGAGTGTTTTCGCAACGCTACGGGCCGGCATTACACCCAGCCGCTGACCTGCATTG
CCTTGTAAACCGCCACCAGC

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTVSYTRRYTMRPSFAFCALSAALLLGGCQAVNTTSGDSVGVERKQYMFSMLSTDEVNKMYAQSYQQTVGEATSKGVLDT
TSANARRVHAIADRLIAQAPKLRPDSAQWQWEVNLIKSDELNANCGPGGKIIVYSGLIDTLKLTDDEIAAVMGHEIAHAL
REHGREAMSKAYGVSMAKQGAGALLGLGQDSLALADTVVNYSLTLPNSRSNENEADLLGLELAARAGYNPNAAITLWQKM
TQNSGGSQPEFMSTHPASESRIASLQAAIPKVMPLYQKAAKS

Sequences:

>Translated_282_residues
MTVSYTRRYTMRPSFAFCALSAALLLGGCQAVNTTSGDSVGVERKQYMFSMLSTDEVNKMYAQSYQQTVGEATSKGVLDT
TSANARRVHAIADRLIAQAPKLRPDSAQWQWEVNLIKSDELNANCGPGGKIIVYSGLIDTLKLTDDEIAAVMGHEIAHAL
REHGREAMSKAYGVSMAKQGAGALLGLGQDSLALADTVVNYSLTLPNSRSNENEADLLGLELAARAGYNPNAAITLWQKM
TQNSGGSQPEFMSTHPASESRIASLQAAIPKVMPLYQKAAKS
>Mature_281_residues
TVSYTRRYTMRPSFAFCALSAALLLGGCQAVNTTSGDSVGVERKQYMFSMLSTDEVNKMYAQSYQQTVGEATSKGVLDTT
SANARRVHAIADRLIAQAPKLRPDSAQWQWEVNLIKSDELNANCGPGGKIIVYSGLIDTLKLTDDEIAAVMGHEIAHALR
EHGREAMSKAYGVSMAKQGAGALLGLGQDSLALADTVVNYSLTLPNSRSNENEADLLGLELAARAGYNPNAAITLWQKMT
QNSGGSQPEFMSTHPASESRIASLQAAIPKVMPLYQKAAKS

Specific function: Seems to regulate the expression of speB [H]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=187, Percent_Identity=31.0160427807487, Blast_Score=83, Evalue=2e-16,
Organism=Escherichia coli, GI87082185, Length=259, Percent_Identity=31.2741312741313, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788840, Length=204, Percent_Identity=28.921568627451, Blast_Score=73, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322940, Length=273, Percent_Identity=30.03663003663, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 30280; Mature: 30148

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSYTRRYTMRPSFAFCALSAALLLGGCQAVNTTSGDSVGVERKQYMFSMLSTDEVNKM
CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YAQSYQQTVGEATSKGVLDTTSANARRVHAIADRLIAQAPKLRPDSAQWQWEVNLIKSDE
HHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC
LNANCGPGGKIIVYSGLIDTLKLTDDEIAAVMGHEIAHALREHGREAMSKAYGVSMAKQG
CCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGALLGLGQDSLALADTVVNYSLTLPNSRSNENEADLLGLELAARAGYNPNAAITLWQKM
CCEEEECCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
TQNSGGSQPEFMSTHPASESRIASLQAAIPKVMPLYQKAAKS
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVSYTRRYTMRPSFAFCALSAALLLGGCQAVNTTSGDSVGVERKQYMFSMLSTDEVNKM
CCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YAQSYQQTVGEATSKGVLDTTSANARRVHAIADRLIAQAPKLRPDSAQWQWEVNLIKSDE
HHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCC
LNANCGPGGKIIVYSGLIDTLKLTDDEIAAVMGHEIAHALREHGREAMSKAYGVSMAKQG
CCCCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGALLGLGQDSLALADTVVNYSLTLPNSRSNENEADLLGLELAARAGYNPNAAITLWQKM
CCEEEECCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
TQNSGGSQPEFMSTHPASESRIASLQAAIPKVMPLYQKAAKS
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2153656; 9278503; 1310091 [H]