Click here to switch to the map view.

The map label for this gene is yoqW [H]

Identifier: 66044236

GI number: 66044236

Start: 1113956

End: 1114585

Strand: Direct

Name: yoqW [H]

Synonym: Psyr_0983

Alternate gene names: 66044236

Gene position: 1113956-1114585 (Clockwise)

Preceding gene: 66044235

Following gene: 66044237

Centisome position: 18.28

GC content: 65.87

Gene sequence:

>630_bases
ATGTGTGGACGCTACGCCCTGTTTCGCTGGACCCCTGCCTTTGCCGCCTTGCCCGGTTTTCCTGCCGATCAGCAGGCGCA
ATGGAATATTTCGCCAGCCGACTGGGTGTTGATCATGCGTGCCGCCGACAACGCGGAGGGCATCGAGCTGGTGCGCGCGC
GCTGGGGCCTGACGCCGGCCTGGCTCACTGACCTGTCGAAAACGCCTGCCCATGCCCGCGCTGAAACGGTGGCCGAGCAG
CCGATGTTTCGCGATGCCTTCACCCATCGCCGCTGTCTGCTCCCCGCCAACGGCTTTTACGAATGGCGCGGCACGATGCG
CAAACGCCCGTTCTGGCTGACGCCGGGGGAGGGCGCCGCGCTGTTTTTCGCCGCGATCTGGGAAGCCTATCCGGTGCAGG
GGCATACGTACCTGAGCGTCGCAGTGGTTACCCAGGCCGCGGCAACCCAGCGTCGGCCATTGATTCTGGACGCCAAGGGC
CAGAAAGACTGGCTGGCCGCCGACACGCCGCTGCCGACCCTGCAAGCGTTGCTGGCTGCCCCGCAGACGGCGCTGCGCGA
GCGCCCACTGGCCAATCTGGTCAATGATCCCAAGCTCAATGCCCCTGAGTGCCTTACGCCTCTGAGCTAG

Upstream 100 bases:

>100_bases
CTGCGTACAATAGCGCCTCGCCCCTGTCTGGCGATGAGCCGGACGACTTCCCCGATGTACTGGTGTGCTGAGCACCTTCA
AACGAGTCTGATTAGCCCCC

Downstream 100 bases:

>100_bases
TCGGGCCAGGCAAAAAACGCCGAATCGGACAAATCCGATATCCGCGTTGAAGTACATCTGATACAAACTGGACACACCTG
CGGGAACCATCAGCCCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MCGRYALFRWTPAFAALPGFPADQQAQWNISPADWVLIMRAADNAEGIELVRARWGLTPAWLTDLSKTPAHARAETVAEQ
PMFRDAFTHRRCLLPANGFYEWRGTMRKRPFWLTPGEGAALFFAAIWEAYPVQGHTYLSVAVVTQAAATQRRPLILDAKG
QKDWLAADTPLPTLQALLAAPQTALRERPLANLVNDPKLNAPECLTPLS

Sequences:

>Translated_209_residues
MCGRYALFRWTPAFAALPGFPADQQAQWNISPADWVLIMRAADNAEGIELVRARWGLTPAWLTDLSKTPAHARAETVAEQ
PMFRDAFTHRRCLLPANGFYEWRGTMRKRPFWLTPGEGAALFFAAIWEAYPVQGHTYLSVAVVTQAAATQRRPLILDAKG
QKDWLAADTPLPTLQALLAAPQTALRERPLANLVNDPKLNAPECLTPLS
>Mature_209_residues
MCGRYALFRWTPAFAALPGFPADQQAQWNISPADWVLIMRAADNAEGIELVRARWGLTPAWLTDLSKTPAHARAETVAEQ
PMFRDAFTHRRCLLPANGFYEWRGTMRKRPFWLTPGEGAALFFAAIWEAYPVQGHTYLSVAVVTQAAATQRRPLILDAKG
QKDWLAADTPLPTLQALLAAPQTALRERPLANLVNDPKLNAPECLTPLS

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Escherichia coli, GI48994894, Length=227, Percent_Identity=26.8722466960352, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 23248; Mature: 23248

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRYALFRWTPAFAALPGFPADQQAQWNISPADWVLIMRAADNAEGIELVRARWGLTPA
CCCCEEEEEECCHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCHH
WLTDLSKTPAHARAETVAEQPMFRDAFTHRRCLLPANGFYEWRGTMRKRPFWLTPGEGAA
HHHHCCCCCCHHHHHHHHHCCHHHHHHHCCEEECCCCCCHHHHHHCCCCCEEECCCCCHH
LFFAAIWEAYPVQGHTYLSVAVVTQAAATQRRPLILDAKGQKDWLAADTPLPTLQALLAA
HHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCHHHHHHHHC
PQTALRERPLANLVNDPKLNAPECLTPLS
CHHHHHHCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCGRYALFRWTPAFAALPGFPADQQAQWNISPADWVLIMRAADNAEGIELVRARWGLTPA
CCCCEEEEEECCHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCHH
WLTDLSKTPAHARAETVAEQPMFRDAFTHRRCLLPANGFYEWRGTMRKRPFWLTPGEGAA
HHHHCCCCCCHHHHHHHHHCCHHHHHHHCCEEECCCCCCHHHHHHCCCCCEEECCCCCHH
LFFAAIWEAYPVQGHTYLSVAVVTQAAATQRRPLILDAKGQKDWLAADTPLPTLQALLAA
HHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCHHHHHHHHC
PQTALRERPLANLVNDPKLNAPECLTPLS
CHHHHHHCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]