| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044211
Identifier: 66044211
GI number: 66044211
Start: 1092194
End: 1093441
Strand: Reverse
Name: 66044211
Synonym: Psyr_0958
Alternate gene names: NA
Gene position: 1093441-1092194 (Counterclockwise)
Preceding gene: 66044212
Following gene: 66044210
Centisome position: 17.94
GC content: 60.58
Gene sequence:
>1248_bases ATGAAGATCGCAGTCATTGGCAGCGGGATTTCTGGCCTGACCAGTGCCTACCTGCTCAACCGCGCGCATGAGGTGACCGT GTTCGAGTCTTCGGACTGGATCGGCGGGCATACTCACACGGTGGATGTGCAGGTCGAAGGCCGCGCCTACGCGATCGACA CCGGTTTCATTGTCTTCAACGACTGGACCTACCCCAATTTCATTCGCCTGCTAGGCCAGCTGGGTGTCGGCTTCCAGCCT GCGGAAATGAGTTTTTCGGTACATGATCCGCGTACTGGCGTGGAATATAACGGCAACAACCTCAACAGCCTGTTCGCCCA GCGCAGCAACCTGCTGTCGCCGCGGTTCTGGGGCATGCTGCGCGATATCCTGCGCTTCAATCGTCAATCGGTCGATGATC TGGAAAACCAGCGCATCGCGGCAGACACCACGCTGGGCGAGTACCTGAAGAACGGCGGTTATGGCCAGCGCTTCATCGAT CATTACATCGTGCCCATGGGCGCGGCGATCTGGTCGATGTCGCTGGCCGACATGCTCGGCTTCCCGCTGCAGTTCTTCGT GCGCTTTTTCAAGAATCACGGCCTGCTCTCGGTCACTCATCGGCCGCAATGGTGCGTGATCGAAGGCGGTTCCAGAAGTT ATGTGGAACCGCTGACAGCCTCGTTCCGCGAGCGCATTCGTCTGTCCTGCCCGGTCACACGTGTCGAGCGTGACAGCGAA GGTGTGACGCTGCACAGCGCCATGGGCAGCGAACGTTTCGACAAGGTGGTGTTTGCCTGTCACAGCGATCAGGCCCTGGC CCTGCTGGCACAGCCATCGAATGCCGAGCAGTCGATTCTCGGCGCGCTGCGCTATGCCGAAAACGATGTGGTGCTGCACA CCGACACGCGACTGCTGCCCAAGCGCAAACTGGCCTGGGCGAGCTGGAACTATCGCCTGGGCGGCGGCGAACAGCAGTCG GCCGCCGTCACCTATGACATGAACATTCTGCAAGGGATCGAGAGCGACACGACGTTCTGCGTCAGCCTCAACCAGACTGC GGCCATCGACCCGGCCAAAATCCTTGGCCGCTACCGCTATGCCCATCCGCAATACAGCCTCGATGCGATCGCTGCACAGG CGCGCTGGGAGGAAATCAACGGTGTCGACCACACCTGGTACTGCGGCGCCTACTGGGCCAATGGCTTTCACGAAGACGGC GTGGTCAGCGGCCTGCGTGTCGCCCAGGCCTTTGGTGAAACGCTGTGA
Upstream 100 bases:
>100_bases TCATCTTCAGCATGAGCTTGCTGGCCCTGCTCCCGGCACGCGCCCGGCTGGCCCTCGGCAAACGCATGGCGCGCAGCGAA TCGTCGAATAAGGACGCGCA
Downstream 100 bases:
>100_bases ACAGCGCCCTCTACAGTGGCTGGATCAGCCACCGGCGGTTTGCACCGCGCGCCCATGAGTTCACCTATCGGATAGGCCTG CTCTATCTGGATCTGGATGA
Product: amine oxidase, flavin-containing
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKIAVIGSGISGLTSAYLLNRAHEVTVFESSDWIGGHTHTVDVQVEGRAYAIDTGFIVFNDWTYPNFIRLLGQLGVGFQP AEMSFSVHDPRTGVEYNGNNLNSLFAQRSNLLSPRFWGMLRDILRFNRQSVDDLENQRIAADTTLGEYLKNGGYGQRFID HYIVPMGAAIWSMSLADMLGFPLQFFVRFFKNHGLLSVTHRPQWCVIEGGSRSYVEPLTASFRERIRLSCPVTRVERDSE GVTLHSAMGSERFDKVVFACHSDQALALLAQPSNAEQSILGALRYAENDVVLHTDTRLLPKRKLAWASWNYRLGGGEQQS AAVTYDMNILQGIESDTTFCVSLNQTAAIDPAKILGRYRYAHPQYSLDAIAAQARWEEINGVDHTWYCGAYWANGFHEDG VVSGLRVAQAFGETL
Sequences:
>Translated_415_residues MKIAVIGSGISGLTSAYLLNRAHEVTVFESSDWIGGHTHTVDVQVEGRAYAIDTGFIVFNDWTYPNFIRLLGQLGVGFQP AEMSFSVHDPRTGVEYNGNNLNSLFAQRSNLLSPRFWGMLRDILRFNRQSVDDLENQRIAADTTLGEYLKNGGYGQRFID HYIVPMGAAIWSMSLADMLGFPLQFFVRFFKNHGLLSVTHRPQWCVIEGGSRSYVEPLTASFRERIRLSCPVTRVERDSE GVTLHSAMGSERFDKVVFACHSDQALALLAQPSNAEQSILGALRYAENDVVLHTDTRLLPKRKLAWASWNYRLGGGEQQS AAVTYDMNILQGIESDTTFCVSLNQTAAIDPAKILGRYRYAHPQYSLDAIAAQARWEEINGVDHTWYCGAYWANGFHEDG VVSGLRVAQAFGETL >Mature_415_residues MKIAVIGSGISGLTSAYLLNRAHEVTVFESSDWIGGHTHTVDVQVEGRAYAIDTGFIVFNDWTYPNFIRLLGQLGVGFQP AEMSFSVHDPRTGVEYNGNNLNSLFAQRSNLLSPRFWGMLRDILRFNRQSVDDLENQRIAADTTLGEYLKNGGYGQRFID HYIVPMGAAIWSMSLADMLGFPLQFFVRFFKNHGLLSVTHRPQWCVIEGGSRSYVEPLTASFRERIRLSCPVTRVERDSE GVTLHSAMGSERFDKVVFACHSDQALALLAQPSNAEQSILGALRYAENDVVLHTDTRLLPKRKLAWASWNYRLGGGEQQS AAVTYDMNILQGIESDTTFCVSLNQTAAIDPAKILGRYRYAHPQYSLDAIAAQARWEEINGVDHTWYCGAYWANGFHEDG VVSGLRVAQAFGETL
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46393; Mature: 46393
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVIGSGISGLTSAYLLNRAHEVTVFESSDWIGGHTHTVDVQVEGRAYAIDTGFIVFN CEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEECCEEEEEEEEEEEEE DWTYPNFIRLLGQLGVGFQPAEMSFSVHDPRTGVEYNGNNLNSLFAQRSNLLSPRFWGML CCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHCCCCHHHHHHH RDILRFNRQSVDDLENQRIAADTTLGEYLKNGGYGQRFIDHYIVPMGAAIWSMSLADMLG HHHHHHCCCCHHHHHCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC FPLQFFVRFFKNHGLLSVTHRPQWCVIEGGSRSYVEPLTASFRERIRLSCPVTRVERDSE CHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHEEECCCCCEECCCCC GVTLHSAMGSERFDKVVFACHSDQALALLAQPSNAEQSILGALRYAENDVVLHTDTRLLP CEEEEHHCCCHHHCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCC KRKLAWASWNYRLGGGEQQSAAVTYDMNILQGIESDTTFCVSLNQTAAIDPAKILGRYRY CHHEEEECCCEEECCCCCCCEEEEEEHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHC AHPQYSLDAIAAQARWEEINGVDHTWYCGAYWANGFHEDGVVSGLRVAQAFGETL CCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKIAVIGSGISGLTSAYLLNRAHEVTVFESSDWIGGHTHTVDVQVEGRAYAIDTGFIVFN CEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEECCEEEEEEEEEEEEE DWTYPNFIRLLGQLGVGFQPAEMSFSVHDPRTGVEYNGNNLNSLFAQRSNLLSPRFWGML CCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEECCCCHHHHHHHHHCCCCHHHHHHH RDILRFNRQSVDDLENQRIAADTTLGEYLKNGGYGQRFIDHYIVPMGAAIWSMSLADMLG HHHHHHCCCCHHHHHCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC FPLQFFVRFFKNHGLLSVTHRPQWCVIEGGSRSYVEPLTASFRERIRLSCPVTRVERDSE CHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHEEECCCCCEECCCCC GVTLHSAMGSERFDKVVFACHSDQALALLAQPSNAEQSILGALRYAENDVVLHTDTRLLP CEEEEHHCCCHHHCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCC KRKLAWASWNYRLGGGEQQSAAVTYDMNILQGIESDTTFCVSLNQTAAIDPAKILGRYRY CHHEEEECCCEEECCCCCCCEEEEEEHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHC AHPQYSLDAIAAQARWEEINGVDHTWYCGAYWANGFHEDGVVSGLRVAQAFGETL CCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA