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The map label for this gene is mcpB [H]

Identifier: 66044161

GI number: 66044161

Start: 1026969

End: 1028849

Strand: Direct

Name: mcpB [H]

Synonym: Psyr_0906

Alternate gene names: 66044161

Gene position: 1026969-1028849 (Clockwise)

Preceding gene: 66044159

Following gene: 66044164

Centisome position: 16.85

GC content: 58.27

Gene sequence:

>1881_bases
ATGAATTTAAAGTTTCGTCATAAGATTCTGCTGGCCGCGGCCGGTGTAGTGGTGCTGGCGTTCGCCTTGTTCACTTTGTA
CAACGATTACCTGCAACGTAAGACGATCAACCAGAACCTCGAGTCCTCCGTGGGTCAAGCGGGTCAACTGACTGCCAGCA
GCGTCCAGAACTGGCTGAGCGGGCGCATTCTGGTGCTGGAAAACCTCACCCAGAACGTAGCCTTTCAGGGGGTCAATTCC
GACCTCAGCGGACTGGTATCGCAGTCTGCGCTGGTATCGACCTTTCAGTTCACCTATGTCGGTGACAGCAAAGGCACATT
CACCCAGCGGCCCAATGTGGACATGCCCGCGGGCTACGACCCTCGCCAACGGCCCTGGTACAAGTCCACCGTCGACGCAG
GCAAGACCATTCTCAGCGCGCCGTATCTGGCTTCTGTGGGTGGCCTGGTGGTAACGATCGCCAGCCCGGTCAAGGCGGCG
GGCCAGGTCACGGGCGTCGTCGGCGGCGACCTGAGCCTCGACACGCTGGTCAAGATCATCAACTCGGTTGAATTCGGCGG
GCTGGGTTACGCCTTTCTGGTCAGTGGCGACGGACAGATCATCGTCAGTCCGGACAAGGAACAGGTGATGAAAAACCTCA
AGGACATCTACCCCGGACAGACCATCAGCCTGGACGCGCGCCTGCGTGAGGTGACCCTCAATGGCCAGCAACGGCTGCTG
TCATTTACCCCGATCACCGGGCTGCCCTCGGCTGACTGGTACATTGGCCTGTCGATCGACAAGGACAAGGCCTATGCGCC
ATTGAGCCAGTTTCGCAGCTCTGCGATGGTTGCCGTGCTGATTGCAGTGGCCGTGATTGCGTTGCTGTTGAGCCTGCTCA
TTCGTGCGCTGATGCGCCCGCTGACCGACATGGGTCGTGCTATGCAGGACATCGCCCAGGGCGAGGGTGATCTGACCCGG
CGCCTGAGCATCCAGGGCAAGGACGAGTTCGCAGCGCTGGGTGGCTCGTTCAATCAGTTCGTGGAGCGCGTGCACGCGTC
CATCGTAGAAGTGTCCTCCGCAACGCTTCAGGTGCATGACCTGTCGCAACGGGTGGTCAACTCCTCCAACTCGTCCATTG
TCGGTTTCGATGAGCAGAGCGCCCGAACCAACAACGTCGCTGCAGCTATCAACGAGCTGGGCGCTGCAACCCAGGAGATT
GCCCGTAACGCATCGGACGCCTCTATCCAGGCCAGTGAGGCCCGCAACCAGGCAGAAGATGGCCAGGTAGTGGTCGAGAA
AACGATACATGCCATGAGCGCGCTGTCGGCCAAGATCAGTGATTCCTGCACGCAGATCGAGCAACTCAACGCCAGCACCG
AAAATATCGGTCACATTCTTGATGTCATCAAAGGCATCTCGCAGCAGACCAATCTGCTGGCCCTCAACGCCGCCATCGAA
GCCGCCCGCGCGGGGGAGGCCGGACGCGGTTTTGCGGTAGTTGCCGACGAGGTGCGCAACCTTGCGCATCGTACCCAGAC
GTCTGCCGACGAGATTCACAAGATGATTGGCAGCCTGCAGAGCGGCTCTCAGCATGCCGTACTCAACATGAATGAAAGCC
AGACGTCGAGTCAGGAAAGTGTCGAAGTTGCCAATCAGGCGGGCAGTCGTCTGCGTGATGTGACACGGCGCATTGGCGAT
ATCGATGGCATGAATCAATCCGTTGCTGCGGCGACAGAAGAGCAGACTGCCGTTGTAGAAACCCTCAATATCGATATCAA
TCAGATCAACACGCTTAATCAACAAGGTGTGGCCAACCTTAATGAAACGCTCAAGGACTGTGCTGCGCTTTCGCAACAAG
CCGGGCGTTTGAAGCAACTGGTCGACAGTTTCAAGATCTGA

Upstream 100 bases:

>100_bases
GTTGCAGGTTCATTGTGTGTGCAGGGCATGACATTTTTTGTGTCGCAACTTGCTCTGGCCTCCGAGCCTTCTTCCAGCAG
TCCTGTTGAGATGCCTTGTC

Downstream 100 bases:

>100_bases
CCGTACATCCAGTAACAGAGGCCGGGCCACTTATACGTAGCCCGGTCTTCAAGAGTGAGGGCTTGCAAGTACCAGTGAGT
GGGGGGGGCAGCAAGCCCGC

Product: histidine kinase, HAMP region:Cache: chemotaxis sensory transducer

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MNLKFRHKILLAAAGVVVLAFALFTLYNDYLQRKTINQNLESSVGQAGQLTASSVQNWLSGRILVLENLTQNVAFQGVNS
DLSGLVSQSALVSTFQFTYVGDSKGTFTQRPNVDMPAGYDPRQRPWYKSTVDAGKTILSAPYLASVGGLVVTIASPVKAA
GQVTGVVGGDLSLDTLVKIINSVEFGGLGYAFLVSGDGQIIVSPDKEQVMKNLKDIYPGQTISLDARLREVTLNGQQRLL
SFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLLSLLIRALMRPLTDMGRAMQDIAQGEGDLTR
RLSIQGKDEFAALGGSFNQFVERVHASIVEVSSATLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEI
ARNASDASIQASEARNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQTNLLALNAAIE
AARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSSQESVEVANQAGSRLRDVTRRIGD
IDGMNQSVAAATEEQTAVVETLNIDINQINTLNQQGVANLNETLKDCAALSQQAGRLKQLVDSFKI

Sequences:

>Translated_626_residues
MNLKFRHKILLAAAGVVVLAFALFTLYNDYLQRKTINQNLESSVGQAGQLTASSVQNWLSGRILVLENLTQNVAFQGVNS
DLSGLVSQSALVSTFQFTYVGDSKGTFTQRPNVDMPAGYDPRQRPWYKSTVDAGKTILSAPYLASVGGLVVTIASPVKAA
GQVTGVVGGDLSLDTLVKIINSVEFGGLGYAFLVSGDGQIIVSPDKEQVMKNLKDIYPGQTISLDARLREVTLNGQQRLL
SFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLLSLLIRALMRPLTDMGRAMQDIAQGEGDLTR
RLSIQGKDEFAALGGSFNQFVERVHASIVEVSSATLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEI
ARNASDASIQASEARNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQTNLLALNAAIE
AARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSSQESVEVANQAGSRLRDVTRRIGD
IDGMNQSVAAATEEQTAVVETLNIDINQINTLNQQGVANLNETLKDCAALSQQAGRLKQLVDSFKI
>Mature_626_residues
MNLKFRHKILLAAAGVVVLAFALFTLYNDYLQRKTINQNLESSVGQAGQLTASSVQNWLSGRILVLENLTQNVAFQGVNS
DLSGLVSQSALVSTFQFTYVGDSKGTFTQRPNVDMPAGYDPRQRPWYKSTVDAGKTILSAPYLASVGGLVVTIASPVKAA
GQVTGVVGGDLSLDTLVKIINSVEFGGLGYAFLVSGDGQIIVSPDKEQVMKNLKDIYPGQTISLDARLREVTLNGQQRLL
SFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLLSLLIRALMRPLTDMGRAMQDIAQGEGDLTR
RLSIQGKDEFAALGGSFNQFVERVHASIVEVSSATLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEI
ARNASDASIQASEARNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQTNLLALNAAIE
AARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSSQESVEVANQAGSRLRDVTRRIGD
IDGMNQSVAAATEEQTAVVETLNIDINQINTLNQQGVANLNETLKDCAALSQQAGRLKQLVDSFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=348, Percent_Identity=29.5977011494253, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1787690, Length=366, Percent_Identity=31.1475409836066, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1788195, Length=337, Percent_Identity=32.3442136498516, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI2367378, Length=356, Percent_Identity=30.3370786516854, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1789453, Length=367, Percent_Identity=27.5204359673025, Blast_Score=102, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 66841; Mature: 66841

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKFRHKILLAAAGVVVLAFALFTLYNDYLQRKTINQNLESSVGQAGQLTASSVQNWLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
GRILVLENLTQNVAFQGVNSDLSGLVSQSALVSTFQFTYVGDSKGTFTQRPNVDMPAGYD
CCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCC
PRQRPWYKSTVDAGKTILSAPYLASVGGLVVTIASPVKAAGQVTGVVGGDLSLDTLVKII
CCCCCCCHHHHHHCHHHHCCCHHHHHCCEEEEECCHHHHHCCEEEEECCCCCHHHHHHHH
NSVEFGGLGYAFLVSGDGQIIVSPDKEQVMKNLKDIYPGQTISLDARLREVTLNGQQRLL
HCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHEECCCHHHEE
SFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLLSLLIRALMRP
EECCCCCCCCCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAALGGSFNQFVERVHASIVEVSSATLQVHD
HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEHHH
LSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEIARNASDASIQASEARNQAED
HHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCC
GQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQTNLLALNAAIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHH
AARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSSQES
HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH
VEVANQAGSRLRDVTRRIGDIDGMNQSVAAATEEQTAVVETLNIDINQINTLNQQGVANL
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHCCCCHHHHHCCCHHCHHHH
NETLKDCAALSQQAGRLKQLVDSFKI
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLKFRHKILLAAAGVVVLAFALFTLYNDYLQRKTINQNLESSVGQAGQLTASSVQNWLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
GRILVLENLTQNVAFQGVNSDLSGLVSQSALVSTFQFTYVGDSKGTFTQRPNVDMPAGYD
CCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCC
PRQRPWYKSTVDAGKTILSAPYLASVGGLVVTIASPVKAAGQVTGVVGGDLSLDTLVKII
CCCCCCCHHHHHHCHHHHCCCHHHHHCCEEEEECCHHHHHCCEEEEECCCCCHHHHHHHH
NSVEFGGLGYAFLVSGDGQIIVSPDKEQVMKNLKDIYPGQTISLDARLREVTLNGQQRLL
HCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHEECCCHHHEE
SFTPITGLPSADWYIGLSIDKDKAYAPLSQFRSSAMVAVLIAVAVIALLLSLLIRALMRP
EECCCCCCCCCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTDMGRAMQDIAQGEGDLTRRLSIQGKDEFAALGGSFNQFVERVHASIVEVSSATLQVHD
HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEHHH
LSQRVVNSSNSSIVGFDEQSARTNNVAAAINELGAATQEIARNASDASIQASEARNQAED
HHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCC
GQVVVEKTIHAMSALSAKISDSCTQIEQLNASTENIGHILDVIKGISQQTNLLALNAAIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHH
AARAGEAGRGFAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSSQES
HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH
VEVANQAGSRLRDVTRRIGDIDGMNQSVAAATEEQTAVVETLNIDINQINTLNQQGVANL
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHCCCCHHHHHCCCHHCHHHH
NETLKDCAALSQQAGRLKQLVDSFKI
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]