| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044108
Identifier: 66044108
GI number: 66044108
Start: 971484
End: 974303
Strand: Reverse
Name: 66044108
Synonym: Psyr_0853
Alternate gene names: NA
Gene position: 974303-971484 (Counterclockwise)
Preceding gene: 66044109
Following gene: 66044107
Centisome position: 15.99
GC content: 58.76
Gene sequence:
>2820_bases ATGAGCCAGGAACGTTATGGCATCCGCCGCTTTGCCCTGTTGAACACTGCCGGTTACAGCCTCGGCCTGTTCCCGCTGGA AAACCCGCTGTCGGTGTATGGCGCGAACAACCTCGGCAAAAGCGCCTCGATCAACGCCCTGCAATTTCCGATTCTGGCGC GCATGTCGGACATGAGCTTCGGCAAGTACAGCCTGGAGCAGTCGCGGCGCTTCTACTTCGCCTCCGACACCAGCTACATT CTGGTGGAAGTTTCCCTGCCCCACGGCCCACATGTCATCGGTGTCGTGGGTCGCGGTCCGGGTGGCGGCTTCGGTCATCA GTTCTTCGCCTATGCCGGCGAGCTGGATCTGGGTCATTACCAGAAGAACGACACCTGCCTGCGTCAGAAAGAGCTGTTCA GCAACCTGGAAAGCCAGGGCCTGAAAGCCTACGAGCTGAAGCCTGACGAACTACGCCGTCTGCTGGTCGGCGGCCACACG TCGATTCCGCTGGACCTGACCTTGATCCCGCTGCGCTCCACCAGCGAGCAGAGCCTCAAGACCTTCCGCGCGCTGTTCAT CAACCTGCTGCACATGCGTGAAATCACCGCCGCCAAACTCAAGCAGCTGTTTCTGGATGCTTTCGAGCACAGCCTGCGTT CGGGCAGCGTCGACTATATTGCCGCCTGCGAAGAAGCCTTCCGCGATGTGCGGCGTATGGAACAGGACTACAACTCGCTG GTGCTGGCCGGCCCTCTGGTCGAGGCGCTGGCCGCTGGCGTCAAGCAGCGCGATGTGTTGCGCGGCAAGCTGCATCGTCT GTCACCGATCCTCGATTCACTGCTCGGCACCTGGTCGGATTACTCCGGTGCGCGCAAGGAAGAGCTGGTCATTCAGGCTG AGCATTACCGTGCCCAGCAGGATGAGATGCAAAACGATCAGCGCAGCAGCACTCAGGAGCTGATGCGCCTGGAGCGCGAG ATCAGCAGCATCCAGCGCTGGGTCGGCGAGCTGTCAGTGCTGAAAAACCGTTTTGCGCTGGTCGATGACGTCAAGGTGCT GGAGCAACAGCTGCTCGCCGCCAAGGACGCTCACGATGAGCTGGCCGGTGCGCTGGCCCAGTCCCGCCAGTTCAGCGCCG AAGACCTGGACGAGCGCCTGCGCGATCTGGAAAAACGCCTCAAGTCGGTCAAGCAACAGCTTGATCATGCGGACAACAAC AGTTATGCCCGTCTGCGTGAAGAGTTTTCCCAGCCGGATGTAGAACGTCTGATGCGCCTATTCAATAGCGCACTGTTCAG CTTGCCGTTGGGTGAGCAAGGTATTGCGCTGGATGATGGCGATGCGTGGGTCAAGTCGCTTGAGACCATTCTGGACGGTT TCAAGGGCGATCAGTTTGCAGTACCGGGGCTGACCATCAACCTGTCGAGCATCGAGCCTCCTGCCCTGCAGGCGCTGGCC GATCGCGCCGCGTTGCGCGATCAGAAAGAGCGACTGGAGAAAGAACTTAAACAACTGAAAACCCAGCAGGCTGTCGCTGC CGACCGTTCGGCGAGCAAGACCCAGACCGAAGCGTTGTATCAGCAGGTGCTGGATGCGCAAAAGGCGCTTGAAGACTTCC GCCGTTGCCAGACCTTGAGCGCAGAGGAATCCACCAAGCTGGAAGAGCTGGCGCAGATGGAAGCCGCTCAGGATGAACTG AAACGCTCCAGCGACGCGTTCACCGAGCGCGTGCAGCAACTGTCCGCCAAGCTGCAATTGATCGCACGTCAGATCGGCGA TATGGAATCCAAGCAACGCACGCTGGACGACGCGCTACGTCGCCGTCAGTTGCTGCCCGCAGACCTGCCGTTCGGCACAC CGTTCATGGACCCTATCGATGATTCCATGGATAACCTGTTGCCGCTGCTCAACGACTATCAGGACAGTTGGCAGGGTCTG TTGCGCTGCGATGGGCAGATCGAAGCGCTGTATGCACAGGTTCGCCTCAAGGGTGTGGCCAAGTTCGACAGCGAGGACGA CATGGAGCGTCGTCTGCAGTTATTGATCAATGCCTATGCGCACCGTACCGACGAAGCGCTTACGCTGGGCAAGGCTCGTC GCGCTGCGGTCACGGATATCGCACGTACCCTGCGCAACATCCGTAGCGACTACGACAGCCTTGAGCATCAACTGGCGCTG TTCAACCGCGAGATCAACAAGCGTCAGGTCTCGAACCTGGCAAGCTTCCGTATCGTGCTCGCCCCTAACAAGGAAGCGCT CAAGCACATTGACCAGATCATCCACAGTGCCGGGCAGTACGAAGAAGGCGAAACGCTGTCGGTCTTTGACCTGAGCCAGA GCGCAGAGCAGGACAACAAGAACGAAGAAGCCAAGGAATATCTGGCGCGGCTTGTGGCTGCCAACCACAACCAATTGGGC TTGAAAGACCTGTTCGAGCTGGCCTTCGAAATCACCAAGGTCAATGGCCAGCCGGTTATCCACACCGATATCGATGGCGC AGCCTCCAACGGCACCACGATGACCATCAAGGCATTGACCAACATGTACCTGCTGTTGCACTTGATGGATCGCGATCAGG CCGGTCGGGTGCGTTTGCCTTACTACCTCGACGAAGCCGCAGACATCGACGAGAAGAATCAGGCAGCCCTGCTGGAAACG AGTTTGCAACTGGGCTTCGTTCCAATTCTGGCCAGTGTGAAGCCACAGGTCTCGGCCCACGTCGCCATCGACCTGGAAGG CGGCAGCGGACCCAATGGTATTTACATTGATGAAGCGGACTGGAAATACATTCAGCGTCGTGACGATGTGAAACCAGAGG TTCCGGAACTGGCCTCTTAA
Upstream 100 bases:
>100_bases AAACCGATGACCCGCTGGACCTGGCTGAATTCGGCGAAGAGACCGAGGAAGAGGCGCTGGCCCGGGCAATCGCCGATGAG CAACGACAGGAGATGGACAC
Downstream 100 bases:
>100_bases GGGCTGATTGACGTAACCAGAAGGCCGCATGTGAGTGCGGCCTTTTTTATTGTCTTTGAATTGAGAAGGCCCTGTTGCAG GCCTCAGGCGAGCAGACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 939; Mature: 938
Protein sequence:
>939_residues MSQERYGIRRFALLNTAGYSLGLFPLENPLSVYGANNLGKSASINALQFPILARMSDMSFGKYSLEQSRRFYFASDTSYI LVEVSLPHGPHVIGVVGRGPGGGFGHQFFAYAGELDLGHYQKNDTCLRQKELFSNLESQGLKAYELKPDELRRLLVGGHT SIPLDLTLIPLRSTSEQSLKTFRALFINLLHMREITAAKLKQLFLDAFEHSLRSGSVDYIAACEEAFRDVRRMEQDYNSL VLAGPLVEALAAGVKQRDVLRGKLHRLSPILDSLLGTWSDYSGARKEELVIQAEHYRAQQDEMQNDQRSSTQELMRLERE ISSIQRWVGELSVLKNRFALVDDVKVLEQQLLAAKDAHDELAGALAQSRQFSAEDLDERLRDLEKRLKSVKQQLDHADNN SYARLREEFSQPDVERLMRLFNSALFSLPLGEQGIALDDGDAWVKSLETILDGFKGDQFAVPGLTINLSSIEPPALQALA DRAALRDQKERLEKELKQLKTQQAVAADRSASKTQTEALYQQVLDAQKALEDFRRCQTLSAEESTKLEELAQMEAAQDEL KRSSDAFTERVQQLSAKLQLIARQIGDMESKQRTLDDALRRRQLLPADLPFGTPFMDPIDDSMDNLLPLLNDYQDSWQGL LRCDGQIEALYAQVRLKGVAKFDSEDDMERRLQLLINAYAHRTDEALTLGKARRAAVTDIARTLRNIRSDYDSLEHQLAL FNREINKRQVSNLASFRIVLAPNKEALKHIDQIIHSAGQYEEGETLSVFDLSQSAEQDNKNEEAKEYLARLVAANHNQLG LKDLFELAFEITKVNGQPVIHTDIDGAASNGTTMTIKALTNMYLLLHLMDRDQAGRVRLPYYLDEAADIDEKNQAALLET SLQLGFVPILASVKPQVSAHVAIDLEGGSGPNGIYIDEADWKYIQRRDDVKPEVPELAS
Sequences:
>Translated_939_residues MSQERYGIRRFALLNTAGYSLGLFPLENPLSVYGANNLGKSASINALQFPILARMSDMSFGKYSLEQSRRFYFASDTSYI LVEVSLPHGPHVIGVVGRGPGGGFGHQFFAYAGELDLGHYQKNDTCLRQKELFSNLESQGLKAYELKPDELRRLLVGGHT SIPLDLTLIPLRSTSEQSLKTFRALFINLLHMREITAAKLKQLFLDAFEHSLRSGSVDYIAACEEAFRDVRRMEQDYNSL VLAGPLVEALAAGVKQRDVLRGKLHRLSPILDSLLGTWSDYSGARKEELVIQAEHYRAQQDEMQNDQRSSTQELMRLERE ISSIQRWVGELSVLKNRFALVDDVKVLEQQLLAAKDAHDELAGALAQSRQFSAEDLDERLRDLEKRLKSVKQQLDHADNN SYARLREEFSQPDVERLMRLFNSALFSLPLGEQGIALDDGDAWVKSLETILDGFKGDQFAVPGLTINLSSIEPPALQALA DRAALRDQKERLEKELKQLKTQQAVAADRSASKTQTEALYQQVLDAQKALEDFRRCQTLSAEESTKLEELAQMEAAQDEL KRSSDAFTERVQQLSAKLQLIARQIGDMESKQRTLDDALRRRQLLPADLPFGTPFMDPIDDSMDNLLPLLNDYQDSWQGL LRCDGQIEALYAQVRLKGVAKFDSEDDMERRLQLLINAYAHRTDEALTLGKARRAAVTDIARTLRNIRSDYDSLEHQLAL FNREINKRQVSNLASFRIVLAPNKEALKHIDQIIHSAGQYEEGETLSVFDLSQSAEQDNKNEEAKEYLARLVAANHNQLG LKDLFELAFEITKVNGQPVIHTDIDGAASNGTTMTIKALTNMYLLLHLMDRDQAGRVRLPYYLDEAADIDEKNQAALLET SLQLGFVPILASVKPQVSAHVAIDLEGGSGPNGIYIDEADWKYIQRRDDVKPEVPELAS >Mature_938_residues SQERYGIRRFALLNTAGYSLGLFPLENPLSVYGANNLGKSASINALQFPILARMSDMSFGKYSLEQSRRFYFASDTSYIL VEVSLPHGPHVIGVVGRGPGGGFGHQFFAYAGELDLGHYQKNDTCLRQKELFSNLESQGLKAYELKPDELRRLLVGGHTS IPLDLTLIPLRSTSEQSLKTFRALFINLLHMREITAAKLKQLFLDAFEHSLRSGSVDYIAACEEAFRDVRRMEQDYNSLV LAGPLVEALAAGVKQRDVLRGKLHRLSPILDSLLGTWSDYSGARKEELVIQAEHYRAQQDEMQNDQRSSTQELMRLEREI SSIQRWVGELSVLKNRFALVDDVKVLEQQLLAAKDAHDELAGALAQSRQFSAEDLDERLRDLEKRLKSVKQQLDHADNNS YARLREEFSQPDVERLMRLFNSALFSLPLGEQGIALDDGDAWVKSLETILDGFKGDQFAVPGLTINLSSIEPPALQALAD RAALRDQKERLEKELKQLKTQQAVAADRSASKTQTEALYQQVLDAQKALEDFRRCQTLSAEESTKLEELAQMEAAQDELK RSSDAFTERVQQLSAKLQLIARQIGDMESKQRTLDDALRRRQLLPADLPFGTPFMDPIDDSMDNLLPLLNDYQDSWQGLL RCDGQIEALYAQVRLKGVAKFDSEDDMERRLQLLINAYAHRTDEALTLGKARRAAVTDIARTLRNIRSDYDSLEHQLALF NREINKRQVSNLASFRIVLAPNKEALKHIDQIIHSAGQYEEGETLSVFDLSQSAEQDNKNEEAKEYLARLVAANHNQLGL KDLFELAFEITKVNGQPVIHTDIDGAASNGTTMTIKALTNMYLLLHLMDRDQAGRVRLPYYLDEAADIDEKNQAALLETS LQLGFVPILASVKPQVSAHVAIDLEGGSGPNGIYIDEADWKYIQRRDDVKPEVPELAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105634; Mature: 105503
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQERYGIRRFALLNTAGYSLGLFPLENPLSVYGANNLGKSASINALQFPILARMSDMSF CCCCHHHHHHHHHHECCCCEEECCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC GKYSLEQSRRFYFASDTSYILVEVSLPHGPHVIGVVGRGPGGGFGHQFFAYAGELDLGHY CHHHHHHCCCEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCC QKNDTCLRQKELFSNLESQGLKAYELKPDELRRLLVGGHTSIPLDLTLIPLRSTSEQSLK CCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHH TFRALFINLLHMREITAAKLKQLFLDAFEHSLRSGSVDYIAACEEAFRDVRRMEQDYNSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCE VLAGPLVEALAAGVKQRDVLRGKLHRLSPILDSLLGTWSDYSGARKEELVIQAEHYRAQQ EEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHHHHH DEMQNDQRSSTQELMRLEREISSIQRWVGELSVLKNRFALVDDVKVLEQQLLAAKDAHDE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LAGALAQSRQFSAEDLDERLRDLEKRLKSVKQQLDHADNNSYARLREEFSQPDVERLMRL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHH FNSALFSLPLGEQGIALDDGDAWVKSLETILDGFKGDQFAVPGLTINLSSIEPPALQALA HHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCHHHHHHH DRAALRDQKERLEKELKQLKTQQAVAADRSASKTQTEALYQQVLDAQKALEDFRRCQTLS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC AEESTKLEELAQMEAAQDELKRSSDAFTERVQQLSAKLQLIARQIGDMESKQRTLDDALR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RRQLLPADLPFGTPFMDPIDDSMDNLLPLLNDYQDSWQGLLRCDGQIEALYAQVRLKGVA HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KFDSEDDMERRLQLLINAYAHRTDEALTLGKARRAAVTDIARTLRNIRSDYDSLEHQLAL CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNREINKRQVSNLASFRIVLAPNKEALKHIDQIIHSAGQYEEGETLSVFDLSQSAEQDNK HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHCCCC NEEAKEYLARLVAANHNQLGLKDLFELAFEITKVNGQPVIHTDIDGAASNGTTMTIKALT CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEHHHHH NMYLLLHLMDRDQAGRVRLPYYLDEAADIDEKNQAALLETSLQLGFVPILASVKPQVSAH HHHHHHHHHCCCCCCCEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE VAIDLEGGSGPNGIYIDEADWKYIQRRDDVKPEVPELAS EEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SQERYGIRRFALLNTAGYSLGLFPLENPLSVYGANNLGKSASINALQFPILARMSDMSF CCCHHHHHHHHHHECCCCEEECCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC GKYSLEQSRRFYFASDTSYILVEVSLPHGPHVIGVVGRGPGGGFGHQFFAYAGELDLGHY CHHHHHHCCCEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCC QKNDTCLRQKELFSNLESQGLKAYELKPDELRRLLVGGHTSIPLDLTLIPLRSTSEQSLK CCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHH TFRALFINLLHMREITAAKLKQLFLDAFEHSLRSGSVDYIAACEEAFRDVRRMEQDYNSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCE VLAGPLVEALAAGVKQRDVLRGKLHRLSPILDSLLGTWSDYSGARKEELVIQAEHYRAQQ EEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHHHHH DEMQNDQRSSTQELMRLEREISSIQRWVGELSVLKNRFALVDDVKVLEQQLLAAKDAHDE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LAGALAQSRQFSAEDLDERLRDLEKRLKSVKQQLDHADNNSYARLREEFSQPDVERLMRL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHH FNSALFSLPLGEQGIALDDGDAWVKSLETILDGFKGDQFAVPGLTINLSSIEPPALQALA HHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCHHHHHHH DRAALRDQKERLEKELKQLKTQQAVAADRSASKTQTEALYQQVLDAQKALEDFRRCQTLS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC AEESTKLEELAQMEAAQDELKRSSDAFTERVQQLSAKLQLIARQIGDMESKQRTLDDALR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RRQLLPADLPFGTPFMDPIDDSMDNLLPLLNDYQDSWQGLLRCDGQIEALYAQVRLKGVA HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KFDSEDDMERRLQLLINAYAHRTDEALTLGKARRAAVTDIARTLRNIRSDYDSLEHQLAL CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNREINKRQVSNLASFRIVLAPNKEALKHIDQIIHSAGQYEEGETLSVFDLSQSAEQDNK HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHCCCC NEEAKEYLARLVAANHNQLGLKDLFELAFEITKVNGQPVIHTDIDGAASNGTTMTIKALT CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEHHHHH NMYLLLHLMDRDQAGRVRLPYYLDEAADIDEKNQAALLETSLQLGFVPILASVKPQVSAH HHHHHHHHHCCCCCCCEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE VAIDLEGGSGPNGIYIDEADWKYIQRRDDVKPEVPELAS EEEEECCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA