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The map label for this gene is 66044095

Identifier: 66044095

GI number: 66044095

Start: 951821

End: 952165

Strand: Reverse

Name: 66044095

Synonym: Psyr_0840

Alternate gene names: NA

Gene position: 952165-951821 (Counterclockwise)

Preceding gene: 66044096

Following gene: 66044093

Centisome position: 15.63

GC content: 58.26

Gene sequence:

>345_bases
ATGAGCCACCCCAAACAGATCGACTCACCGCTTTATATGCTGCTGCGCAAAGATGACGTCGAAGGTTTCAATCAAGAGAA
ACCGCGAACCGGCACCATCGACATGGTGGGGGGCGACTTCAGGGGGCTGGACCTGCGCGCGCTGGACACCGCCAATATCG
ACTTCACCGACGCCTATTTTCGCTCTGCCGACCTTCGTGGCCTGGACCTGCGCAATACGCCGATGGAAGGTGCGAGCATC
GCTCATGCACAGATTTCAGGCGTGTTCTTCCCGGCTGAACTCTGGGCTGACGAGATTCTGATGTCGGTGAATTTCGGCAC
GCGCCTGCGCTACCGTACCCACTGA

Upstream 100 bases:

>100_bases
AACGACACATGGCCGTTGAGCGGTTAGCGCTTCACGGCCTTACAATGATGGCGATATACTGGCGCCACAATTCCAACGCA
ATGACATGTCGGAGGCCATC

Downstream 100 bases:

>100_bases
TACGGTAAAAACGTTGCAGCCTGCATGCGCGATGCACAGCAGGCTGGCGATGTAGGACCCTGCTTTCACCCCCTCTTCCC
TCGCATGCGCAACCCGGTCG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; Pentapeptide Repeat Domain Protein; Low-Complexity Protein

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSHPKQIDSPLYMLLRKDDVEGFNQEKPRTGTIDMVGGDFRGLDLRALDTANIDFTDAYFRSADLRGLDLRNTPMEGASI
AHAQISGVFFPAELWADEILMSVNFGTRLRYRTH

Sequences:

>Translated_114_residues
MSHPKQIDSPLYMLLRKDDVEGFNQEKPRTGTIDMVGGDFRGLDLRALDTANIDFTDAYFRSADLRGLDLRNTPMEGASI
AHAQISGVFFPAELWADEILMSVNFGTRLRYRTH
>Mature_113_residues
SHPKQIDSPLYMLLRKDDVEGFNQEKPRTGTIDMVGGDFRGLDLRALDTANIDFTDAYFRSADLRGLDLRNTPMEGASIA
HAQISGVFFPAELWADEILMSVNFGTRLRYRTH

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12908; Mature: 12777

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPKQIDSPLYMLLRKDDVEGFNQEKPRTGTIDMVGGDFRGLDLRALDTANIDFTDAYF
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHH
RSADLRGLDLRNTPMEGASIAHAQISGVFFPAELWADEILMSVNFGTRLRYRTH
CCCCCCCCCCCCCCCCCCEEEEEEECEEEECHHHHHHHEEEECCCCCEEEEECC
>Mature Secondary Structure 
SHPKQIDSPLYMLLRKDDVEGFNQEKPRTGTIDMVGGDFRGLDLRALDTANIDFTDAYF
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHH
RSADLRGLDLRNTPMEGASIAHAQISGVFFPAELWADEILMSVNFGTRLRYRTH
CCCCCCCCCCCCCCCCCCEEEEEEECEEEECHHHHHHHEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA