| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is sacA [H]
Identifier: 66044013
GI number: 66044013
Start: 863082
End: 864563
Strand: Reverse
Name: sacA [H]
Synonym: Psyr_0758
Alternate gene names: 66044013
Gene position: 864563-863082 (Counterclockwise)
Preceding gene: 66044014
Following gene: 66044012
Centisome position: 14.19
GC content: 60.73
Gene sequence:
>1482_bases ATGAGCAACCCGATGTCCCCCGCCCTCGAACGCGCGCACCATGCGCTGGAAGAGGGCCTGTCGCAGCTCATCCACGATTA TCGGCCCGGTTACCACCTGGCCCCGCCGGCAGGCTGGATGAATGACCCCAACGGGGTGGTGTTCTTTCGTGGCGAATATC ATGTGTTCTATCAACACCACCCGTTCGACGCGAAATGGGGCCCGATGTACTGGGGCCATGCAAAGAGTGCCGATCTGGTC CATTGGCAACACCTGCCCATTGCCCTGGCACCCGGTGATGACTTCGATCGGGACGGTTGTTTTTCCGGCAGTGCAGTGGT GTGTGGCGACACCCTGGCGCTGATCTACACCGGGCACATATGGCTGGGTGACGTGGGCGACGAGCGTTTTATCCGTCAGG TGCAGTGCCTGGCCACCAGCACCGATGGCATCAGTTTCGTCAAACACGGGGCCGTTATCGACACCCCGCCGCAAGACGAG ATGATTCATTTCCGCGACCCGAAAGTCTGGCGACAGGATGGCCACTGGTACCTGATTGCCGGCGCGCGCCTGGGCGACAA ACCGCTGCTGCCGCTCTATCGATCCAAGGACCTGCACGCGTGGGAATTCGTCAGCTATGTGTCATCAGGCGAGGAAGGCG ACGGCTATATGTGGGAATGCCCGGACCTGTTTGGCCTCAATGAACGCGACGTACTGCTTTACTCCCCCCAGGGCATGCCG GCACAGCGCTACGAGCGACTGAACAGGTTCCACACCGGCTATCGAGTGGGCCAGGTCGACAGTCAATGGCAGTTCACCGG CGGGCCTTTTATCGAGCTGGACAGCGGCCACGACTTCTATGCGGCGCAGACGCTGGTGGCGGCAGATGGCAGACGTCTGC TGTGGGCGTGGATCGACATGTGGGAAAGCCCGACCCCCACCGAAGCGCATCACTGGCGCGGCATGCTCGGCCTGCCGCGA GAACTTGAAGTGCGCGAAAATCGCCTCTGCGTACACCCCGCACGCGAGCTGACAGCGTTGCGCGACGCGTCACTGCCAGG CACTGCCTGGTGGAGCGACGCGGGTAGCCAGTGGCTGACCGACATACACGGCGACATGCTGGAAATCCACGTGCAGTTGG ACCTGCTCGACTGCATCGAAGGCCACTTGGGCGTGGCATTGCGCTGCAGTCCAGATGGCCAGGAGCAGACTCTGCTTTAC TACGATGCGTCGCTAAAACGTTTGATCCTCGACCGTACTCAGTCGGGCACCCACGTCAGCGGTCAGCGCAGCGTAGCGAT AGATCCACAACAGAATCAGCTTGAACTGCGGATCTTCCTTGATCGCTCGTCCATTGAGGTGTTCGAGCAAAACGGCAGTT TCAGCTTCAGCAGCCGCCTTTATCCACAGACCGACAGCCTGGGGGTCAAGCTTGTTGCCAACGGCACAGGAGGCCGAGTC TGCATTGCCAATGCATGGCAGCTCTCCTCCGGATACCTGTAA
Upstream 100 bases:
>100_bases TGGCCCTGAAGCGCCACACAGACGCCAGTCAACACCTGACACCCGGCACCACACCGCACCTCGTACAAGCAGGCACCCTA TGAGTTTTTCCGTGAATGCC
Downstream 100 bases:
>100_bases GGTAAATCATTGAAGTCGCGAAAAAAATCAGCTCTCTGTAGCATGATAATCATCAGTCAACCCGACAGGCCCCGACCCGC ATGACCTCAGTTAAAGACGT
Product: sucrose-6-phosphate hydrolase
Products: NA
Alternate protein names: Sucrase; Invertase [H]
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSNPMSPALERAHHALEEGLSQLIHDYRPGYHLAPPAGWMNDPNGVVFFRGEYHVFYQHHPFDAKWGPMYWGHAKSADLV HWQHLPIALAPGDDFDRDGCFSGSAVVCGDTLALIYTGHIWLGDVGDERFIRQVQCLATSTDGISFVKHGAVIDTPPQDE MIHFRDPKVWRQDGHWYLIAGARLGDKPLLPLYRSKDLHAWEFVSYVSSGEEGDGYMWECPDLFGLNERDVLLYSPQGMP AQRYERLNRFHTGYRVGQVDSQWQFTGGPFIELDSGHDFYAAQTLVAADGRRLLWAWIDMWESPTPTEAHHWRGMLGLPR ELEVRENRLCVHPARELTALRDASLPGTAWWSDAGSQWLTDIHGDMLEIHVQLDLLDCIEGHLGVALRCSPDGQEQTLLY YDASLKRLILDRTQSGTHVSGQRSVAIDPQQNQLELRIFLDRSSIEVFEQNGSFSFSSRLYPQTDSLGVKLVANGTGGRV CIANAWQLSSGYL
Sequences:
>Translated_493_residues MSNPMSPALERAHHALEEGLSQLIHDYRPGYHLAPPAGWMNDPNGVVFFRGEYHVFYQHHPFDAKWGPMYWGHAKSADLV HWQHLPIALAPGDDFDRDGCFSGSAVVCGDTLALIYTGHIWLGDVGDERFIRQVQCLATSTDGISFVKHGAVIDTPPQDE MIHFRDPKVWRQDGHWYLIAGARLGDKPLLPLYRSKDLHAWEFVSYVSSGEEGDGYMWECPDLFGLNERDVLLYSPQGMP AQRYERLNRFHTGYRVGQVDSQWQFTGGPFIELDSGHDFYAAQTLVAADGRRLLWAWIDMWESPTPTEAHHWRGMLGLPR ELEVRENRLCVHPARELTALRDASLPGTAWWSDAGSQWLTDIHGDMLEIHVQLDLLDCIEGHLGVALRCSPDGQEQTLLY YDASLKRLILDRTQSGTHVSGQRSVAIDPQQNQLELRIFLDRSSIEVFEQNGSFSFSSRLYPQTDSLGVKLVANGTGGRV CIANAWQLSSGYL >Mature_492_residues SNPMSPALERAHHALEEGLSQLIHDYRPGYHLAPPAGWMNDPNGVVFFRGEYHVFYQHHPFDAKWGPMYWGHAKSADLVH WQHLPIALAPGDDFDRDGCFSGSAVVCGDTLALIYTGHIWLGDVGDERFIRQVQCLATSTDGISFVKHGAVIDTPPQDEM IHFRDPKVWRQDGHWYLIAGARLGDKPLLPLYRSKDLHAWEFVSYVSSGEEGDGYMWECPDLFGLNERDVLLYSPQGMPA QRYERLNRFHTGYRVGQVDSQWQFTGGPFIELDSGHDFYAAQTLVAADGRRLLWAWIDMWESPTPTEAHHWRGMLGLPRE LEVRENRLCVHPARELTALRDASLPGTAWWSDAGSQWLTDIHGDMLEIHVQLDLLDCIEGHLGVALRCSPDGQEQTLLYY DASLKRLILDRTQSGTHVSGQRSVAIDPQQNQLELRIFLDRSSIEVFEQNGSFSFSSRLYPQTDSLGVKLVANGTGGRVC IANAWQLSSGYL
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=492, Percent_Identity=25.8130081300813, Blast_Score=122, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR006232 [H]
Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.26 [H]
Molecular weight: Translated: 55710; Mature: 55579
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPMSPALERAHHALEEGLSQLIHDYRPGYHLAPPAGWMNDPNGVVFFRGEYHVFYQHH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEECCCEEEEEEEC PFDAKWGPMYWGHAKSADLVHWQHLPIALAPGDDFDRDGCFSGSAVVCGDTLALIYTGHI CCCCCCCCEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCEEEECCEEEEEEECCE WLGDVGDERFIRQVQCLATSTDGISFVKHGAVIDTPPQDEMIHFRDPKVWRQDGHWYLIA EEECCCCHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCCCEEEECCCCCEEECCCEEEEE GARLGDKPLLPLYRSKDLHAWEFVSYVSSGEEGDGYMWECPDLFGLNERDVLLYSPQGMP CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEECCCCCC AQRYERLNRFHTGYRVGQVDSQWQFTGGPFIELDSGHDFYAAQTLVAADGRRLLWAWIDM HHHHHHHHHHHCCEEECCCCCCEEECCCCEEEECCCCCCHHHEEEEECCCCEEEEEEHHH WESPTPTEAHHWRGMLGLPRELEVRENRLCVHPARELTALRDASLPGTAWWSDAGSQWLT CCCCCCCCHHHCCCCCCCCCCEEECCCEEEECCHHHHHHHHCCCCCCCCEECCCCCHHHH DIHGDMLEIHVQLDLLDCIEGHLGVALRCSPDGQEQTLLYYDASLKRLILDRTQSGTHVS HHCCCEEEEEEEEEHHHHCCCCCCEEEEECCCCCCCEEEEECCHHHHHHHHCCCCCCEEC GQRSVAIDPQQNQLELRIFLDRSSIEVFEQNGSFSFSSRLYPQTDSLGVKLVANGTGGRV CCCEEEECCCCCCEEEEEEEECCCEEEEECCCCEEECCCCCCCCCCCCEEEEECCCCCEE CIANAWQLSSGYL EEEEEEECCCCCC >Mature Secondary Structure SNPMSPALERAHHALEEGLSQLIHDYRPGYHLAPPAGWMNDPNGVVFFRGEYHVFYQHH CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEECCCEEEEEEEC PFDAKWGPMYWGHAKSADLVHWQHLPIALAPGDDFDRDGCFSGSAVVCGDTLALIYTGHI CCCCCCCCEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCEEEECCEEEEEEECCE WLGDVGDERFIRQVQCLATSTDGISFVKHGAVIDTPPQDEMIHFRDPKVWRQDGHWYLIA EEECCCCHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCCCEEEECCCCCEEECCCEEEEE GARLGDKPLLPLYRSKDLHAWEFVSYVSSGEEGDGYMWECPDLFGLNERDVLLYSPQGMP CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEECCCCCC AQRYERLNRFHTGYRVGQVDSQWQFTGGPFIELDSGHDFYAAQTLVAADGRRLLWAWIDM HHHHHHHHHHHCCEEECCCCCCEEECCCCEEEECCCCCCHHHEEEEECCCCEEEEEEHHH WESPTPTEAHHWRGMLGLPRELEVRENRLCVHPARELTALRDASLPGTAWWSDAGSQWLT CCCCCCCCHHHCCCCCCCCCCEEECCCEEEECCHHHHHHHHCCCCCCCCEECCCCCHHHH DIHGDMLEIHVQLDLLDCIEGHLGVALRCSPDGQEQTLLYYDASLKRLILDRTQSGTHVS HHCCCEEEEEEEEEHHHHCCCCCCEEEEECCCCCCCEEEEECCHHHHHHHHCCCCCCEEC GQRSVAIDPQQNQLELRIFLDRSSIEVFEQNGSFSFSSRLYPQTDSLGVKLVANGTGGRV CCCEEEECCCCCCEEEEEEEECCCEEEEECCCCEEECCCCCCCCCCCCEEEEECCCCCEE CIANAWQLSSGYL EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2254250; 1368686 [H]