Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yfeH [C]

Identifier: 66043915

GI number: 66043915

Start: 735983

End: 737011

Strand: Reverse

Name: yfeH [C]

Synonym: Psyr_0648

Alternate gene names: 66043915

Gene position: 737011-735983 (Counterclockwise)

Preceding gene: 66043920

Following gene: 66043911

Centisome position: 12.09

GC content: 61.03

Gene sequence:

>1029_bases
ATGCAATCACTCAAACACTTCAAGCGCGTCGCCACTGACTGGTTCCTCTGGGGCATGGTGCTGGCGACGGTACTCGCCTA
TTTCTTCCCGCGTTTCGGGGCTACCGGCGGCAGCATGCACGCTGAGTACGTCATCAAGGTCGGCGTGTTCGTAGTGTTCT
TTCTGCATGGCGTGAATCTGTCCAGCGAGCAGATCAAGAAAGGCCTGACCAACTGGCGCTTGCACGTGATGATCCAGGTC
TTCACCTTCGTGGTGTTCCCGCTGATCTGGCTGGCGTGCAACAAGCTGCTGGGCTCGCAGGTGCCAGCGCTGCTGATGCT
GGGCTTCCTCTACCTGTGCGCCCTGCCCTCGACCATTTCCTCCTCTGTGGCGCTGACCGGCAGCGCAGGCGGCAATGTCC
CGGCAGCGATTCTCAACGCCAGCATGTCCAGTGTCATCGGGATTTTCATCACCCCGTGGCTGGTGAGCCTGGTGGTCGGC
ACCGGCGCTGGCGGGATCGATCTGGGCGATACGCTGCTCGACCTGTGCGCCATGCTCCTGCTGCCACTGGTGCTTGGCCA
GTTAATGCGGCCGCTGCTGGGCAAGTTCTTCGCCCGTCACAAGAAATACACCAACCTGATCGACAAGCTGGTGATTCTGC
TGCTGGTGTATGCGGCGTTCTGCAACTCGATGATCTCCGGCATGTGGCAAAGCCAGGGCAACAGCGTGATCCTGACCGCG
TTCATCGGCACCGCGCTGTTGCTGGCGGTGATCCTGTTGATGACCACCCGCACGGCGCGGGTGCTCAAGTTCGATCATGC
CGACAAGGTCGCGGCGGTGTTCTGCGCCACCAAGAAGTCCCTTGCTGCAGGCGCGCCGATGGCTGCGCTGATTTTCGGCA
GCAATCCGGGGCTTGGCCTGATTCTGTTGCCGATCATGATCTACCACCCGATGCAGCTGATCGTGTGCTCGATCATCGCC
GAGAGCTACGCCAGTCGTCATCGCCAGCAGCTTTCGGCCGCCGCCCTGGAAGAAGCTCAAGCCGCGTGA

Upstream 100 bases:

>100_bases
TCCGTTACTCGGCATCTTATGGCCTTATGTCGCAAGACGGCTATGGAGCAACAGAGTAGCCTGCACGCCTCTCTGTTTAC
AAAAGTTCTCCGGACCCCGT

Downstream 100 bases:

>100_bases
TTGCGGCTTACATCAGCGCGTCATCATCCAGCGTGACGCGCGCGTAGAAGACGATCGCCACGGTGGGGATCAGTGCGGAA
TAACCCGGCCGCAGCGCAGT

Product: transporter, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MQSLKHFKRVATDWFLWGMVLATVLAYFFPRFGATGGSMHAEYVIKVGVFVVFFLHGVNLSSEQIKKGLTNWRLHVMIQV
FTFVVFPLIWLACNKLLGSQVPALLMLGFLYLCALPSTISSSVALTGSAGGNVPAAILNASMSSVIGIFITPWLVSLVVG
TGAGGIDLGDTLLDLCAMLLLPLVLGQLMRPLLGKFFARHKKYTNLIDKLVILLLVYAAFCNSMISGMWQSQGNSVILTA
FIGTALLLAVILLMTTRTARVLKFDHADKVAAVFCATKKSLAAGAPMAALIFGSNPGLGLILLPIMIYHPMQLIVCSIIA
ESYASRHRQQLSAAALEEAQAA

Sequences:

>Translated_342_residues
MQSLKHFKRVATDWFLWGMVLATVLAYFFPRFGATGGSMHAEYVIKVGVFVVFFLHGVNLSSEQIKKGLTNWRLHVMIQV
FTFVVFPLIWLACNKLLGSQVPALLMLGFLYLCALPSTISSSVALTGSAGGNVPAAILNASMSSVIGIFITPWLVSLVVG
TGAGGIDLGDTLLDLCAMLLLPLVLGQLMRPLLGKFFARHKKYTNLIDKLVILLLVYAAFCNSMISGMWQSQGNSVILTA
FIGTALLLAVILLMTTRTARVLKFDHADKVAAVFCATKKSLAAGAPMAALIFGSNPGLGLILLPIMIYHPMQLIVCSIIA
ESYASRHRQQLSAAALEEAQAA
>Mature_342_residues
MQSLKHFKRVATDWFLWGMVLATVLAYFFPRFGATGGSMHAEYVIKVGVFVVFFLHGVNLSSEQIKKGLTNWRLHVMIQV
FTFVVFPLIWLACNKLLGSQVPALLMLGFLYLCALPSTISSSVALTGSAGGNVPAAILNASMSSVIGIFITPWLVSLVVG
TGAGGIDLGDTLLDLCAMLLLPLVLGQLMRPLLGKFFARHKKYTNLIDKLVILLLVYAAFCNSMISGMWQSQGNSVILTA
FIGTALLLAVILLMTTRTARVLKFDHADKVAAVFCATKKSLAAGAPMAALIFGSNPGLGLILLPIMIYHPMQLIVCSIIA
ESYASRHRQQLSAAALEEAQAA

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfeH [H]

Homologues:

Organism=Homo sapiens, GI71725371, Length=327, Percent_Identity=32.1100917431193, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI14149785, Length=143, Percent_Identity=34.2657342657343, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI1788749, Length=333, Percent_Identity=39.6396396396396, Blast_Score=209, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6323677, Length=381, Percent_Identity=23.3595800524934, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002657
- InterPro:   IPR016833 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 36850; Mature: 36850

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00131 CARBOXYPEPT_SER_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLKHFKRVATDWFLWGMVLATVLAYFFPRFGATGGSMHAEYVIKVGVFVVFFLHGVNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SSEQIKKGLTNWRLHVMIQVFTFVVFPLIWLACNKLLGSQVPALLMLGFLYLCALPSTIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHC
SSVALTGSAGGNVPAAILNASMSSVIGIFITPWLVSLVVGTGAGGIDLGDTLLDLCAMLL
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LPLVLGQLMRPLLGKFFARHKKYTNLIDKLVILLLVYAAFCNSMISGMWQSQGNSVILTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH
FIGTALLLAVILLMTTRTARVLKFDHADKVAAVFCATKKSLAAGAPMAALIFGSNPGLGL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
ILLPIMIYHPMQLIVCSIIAESYASRHRQQLSAAALEEAQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSLKHFKRVATDWFLWGMVLATVLAYFFPRFGATGGSMHAEYVIKVGVFVVFFLHGVNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
SSEQIKKGLTNWRLHVMIQVFTFVVFPLIWLACNKLLGSQVPALLMLGFLYLCALPSTIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHC
SSVALTGSAGGNVPAAILNASMSSVIGIFITPWLVSLVVGTGAGGIDLGDTLLDLCAMLL
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LPLVLGQLMRPLLGKFFARHKKYTNLIDKLVILLLVYAAFCNSMISGMWQSQGNSVILTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH
FIGTALLLAVILLMTTRTARVLKFDHADKVAAVFCATKKSLAAGAPMAALIFGSNPGLGL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
ILLPIMIYHPMQLIVCSIIAESYASRHRQQLSAAALEEAQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 1849605 [H]