Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is yghU [H]

Identifier: 66043876

GI number: 66043876

Start: 699376

End: 700218

Strand: Reverse

Name: yghU [H]

Synonym: Psyr_0609

Alternate gene names: 66043876

Gene position: 700218-699376 (Counterclockwise)

Preceding gene: 66043889

Following gene: 66043875

Centisome position: 11.49

GC content: 60.62

Gene sequence:

>843_bases
ATGACCCAAACGTCCTACACCCCGCCGAAGGTCTGGCAGCAGGAAACAAAAGCGGGCGGCACGTTCGCCAGCATCAACCG
GCCCGTCGCCGGCCCCACACACGACAAGGCGCTGCCGGTCGGCAAGCACCCGCTGCAGCTTTATTCACTGGCCACCCCCA
ACGGTGTGAAAGTCGCGATCATGCTCGAAGAGCTGCTGGCGCTCGGGCACAGCGGTGCGGAATACGATGCCTGGCTGATC
CGTATCTCCGAGGGCGATCAGTTCTCCAGCGGTTTTGTCGAGATCAATCCCAATTCCAAGATCCCGGCATTGCTGGATCG
AAGCCATGAAACACCTGTTCGGGTATTCGAGTCCGGCTCTATCCTGCTGTACCTGGCCGAAAAGTTTTCCAGCTTCCTGC
CCGCCGACCCGGCAGGCCGAACCGAAACGCTGAACTGGCTGTTCTGGCAGATGGGCGCTGCGCCGTATCTGGGCGGCGGT
TTCGGGCATTTCTATGCCTACGCGCCGGAGAAACTCGAATACCCCATCAATCGGTTCGCGATGGAGGCCAAGCGCCAACT
CGATGTGCTGAACCGTCGCCTGGGCGAGCACCGCTACCTGGCCGGCGACACCTACACGATTGCCGATATCGCGGTCTGGC
CATGGTATGGCGCACTGGTGCAGAACAAGGTGTACTCGGCTGCCGAATTCCTCTCGGTACACGAATACCCGCACCTGATT
CGCTGGACAGAAGAAATCGCCGCACGCCCTGCCGTCATCAGAGGCCAGAAGGTCAACCGCACCTGGGGCGAAGAAGCCGA
TCAGGTTCCGGAGCGGCATCAGGCGTCCGATCTGGATAAATAA

Upstream 100 bases:

>100_bases
ATCGCAAGGCACTTCCCAGCCCGTACGTTGATCTATAACGTCTATGGTCCTTTGCAACACGACCGGTCCAGCGAACACCC
TTGAACAAGCGAGGCTCCTC

Downstream 100 bases:

>100_bases
GGCACACGTCAAGTCCTTCGCGGACAGAAACCTGATGCTACAAACCCACAGGAAACTCTGGAAAAGAACGTCCTGATCTG
CACGTAAAGTAGCCGACCTT

Product: putative glutathione S-transferase YghU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAIMLEELLALGHSGAEYDAWLI
RISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGSILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGG
FGHFYAYAPEKLEYPINRFAMEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLI
RWTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK

Sequences:

>Translated_280_residues
MTQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAIMLEELLALGHSGAEYDAWLI
RISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGSILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGG
FGHFYAYAPEKLEYPINRFAMEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLI
RWTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK
>Mature_279_residues
TQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAIMLEELLALGHSGAEYDAWLIR
ISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGSILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGGF
GHFYAYAPEKLEYPINRFAMEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLIR
WTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=279, Percent_Identity=68.8172043010753, Blast_Score=406, Evalue=1e-115,
Organism=Escherichia coli, GI1788640, Length=213, Percent_Identity=41.3145539906103, Blast_Score=149, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6324100, Length=259, Percent_Identity=28.957528957529, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17864598, Length=179, Percent_Identity=29.0502793296089, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28571670, Length=179, Percent_Identity=28.4916201117318, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17864592, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 31399; Mature: 31268

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAI
CCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEH
MLEELLALGHSGAEYDAWLIRISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGS
HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEEECCC
ILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGGFGHFYAYAPEKLEYPINRFA
EEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHEEECCHHHCCCHHHHH
MEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLI
HHHHHHHHHHHHHHCCCEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RWTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK
HHHHHHHCCCCEECCCCCCCCCCCHHHHCCHHHHHCCCCC
>Mature Secondary Structure 
TQTSYTPPKVWQQETKAGGTFASINRPVAGPTHDKALPVGKHPLQLYSLATPNGVKVAI
CCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEH
MLEELLALGHSGAEYDAWLIRISEGDQFSSGFVEINPNSKIPALLDRSHETPVRVFESGS
HHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCCCEEEEECCC
ILLYLAEKFSSFLPADPAGRTETLNWLFWQMGAAPYLGGGFGHFYAYAPEKLEYPINRFA
EEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHEEECCHHHCCCHHHHH
MEAKRQLDVLNRRLGEHRYLAGDTYTIADIAVWPWYGALVQNKVYSAAEFLSVHEYPHLI
HHHHHHHHHHHHHHCCCEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RWTEEIAARPAVIRGQKVNRTWGEEADQVPERHQASDLDK
HHHHHHHCCCCEECCCCCCCCCCCHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]