| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ahcY [H]
Identifier: 66043727
GI number: 66043727
Start: 498180
End: 499589
Strand: Reverse
Name: ahcY [H]
Synonym: Psyr_0460
Alternate gene names: 66043727
Gene position: 499589-498180 (Counterclockwise)
Preceding gene: 66043729
Following gene: 66043726
Centisome position: 8.2
GC content: 58.72
Gene sequence:
>1410_bases ATGAGTGCTGTAATGACGCCCGCAGAATTCAATGACTACAAGGTTGCCGATATTTCCCTGGCCGCCTGGGGTCGCCGCGA AACCATCATCGCCGAATCCGAAATGCCTGCCCTGATGGGTCTGCGTCGCAAATACGCCGGTGATCAGCCGCTGAAAGGCG CGAAGATTCTCGGTTGCATCCACATGACCATTCAGACCGCCGTACTGATCGAAACCCTGGTTGCCCTGGGTGCCGAAGTT CGCTGGTCGTCGTGCAACATTTTCTCGACTCAGGACCAGGCTGCTGCGGCCATCGCTGCTGCCGGCATTCCTGTGTTCGC CTGGAAAGGCGAAACCGAAGAAGAATACGAGTGGTGCATCGAGCAGACCATCCTCAAGGATGGCCAGCCATGGGATGCCA ACATGATCCTCGACGACGGCGGCGACCTGACCGAGATCATCCACAAGAAATACCCGGCAATGCTGGACAAGATCCACGGC GTCACCGAAGAAACCACCACGGGCGTGCACCGCCTGCTGGACATGCTGGCCAAGGGCGAGCTGAAAATCCCGGCCATCAA CGTCAACGACTCGGTGACCAAGAGCAAGAACGACAACAAGTACGGCTGCCGTCACAGCCTGAACGACGCCATCAAGCGCG GCACCGACCACTTGCTGTCCGGCAAGCAGGCGCTGGTGATCGGCTACGGCGACGTGGGCAAGGGCTCGGCCCAGTCCCTG CGTCAGGAAGGCATGATCGTCAAAGTGACCGAAGTCGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGTTTCGAGCT GGTTTCGCCGTTCATCGACGGTGAGAACGACGGCACCGAAGCGAGCATCGACAAGGCACTGTTGGGCAAGATCGACCTGA TCGTGACCACCACCGGTAACGTCAACGTTTGCGACTCCAACATGCTCAAGGCGCTGAAAAAGCGCGCTGTGGTGTGCAAC ATCGGTCACTTCGACAACGAAATCGACACCGCTTTCATGCGCAAGAACTGGGCATGGGAAGAAGTGAAGCCACAGGTTCA CAAGATCCACCGTACCGGCCCAGGCTCGTTCGACGCACAGAACGACGACTACCTGATCCTGCTGGCCGAAGGCCGTCTGG TAAACCTGGGTAACGCCACTGGCCACCCAAGCCGCATCATGGATGGCTCGTTCGCCAACCAGGTTCTGGCGCAGATCTTC CTCTTCGAGCAGAAGTACGCCGACCTGGCACCCGCCAAGAAATCCGAGCGCCTGACCGTTGAAGTACTGCCGAAGAAACT CGACGAAGAAGTGGCCCTGGAAATGGTCCGCGGCTTCGGTGGCGTTGTGACCAAGCTGACCAAGACCCAGGCCGATTACA TCGGTGTGACCGTCGAAGGTCCGTTCAAGCCAGACGCTTATCGCTATTGA
Upstream 100 bases:
>100_bases CAGGCTCGGATGGGGCGTTGTTTGCCAGGACGATCCTCGACCGGCAAACCTTAAACGCACAACGGCGCCCATTCGCATTT TTATGGAATGGAGACTCTCA
Downstream 100 bases:
>100_bases TAGATAGCTGCAAGCGATAAGCTTCAAGCTGCAAGCAAGTGCAGTTCTCTTGTTTGCAGCTTGAGCTTGACGCTCGTTTC TTTATCGTTATTACACAGCC
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSAVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEV RWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHKKYPAMLDKIHG VTEETTTGVHRLLDMLAKGELKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSL RQEGMIVKVTEVDPICAMQACMDGFELVSPFIDGENDGTEASIDKALLGKIDLIVTTTGNVNVCDSNMLKALKKRAVVCN IGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGPGSFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIF LFEQKYADLAPAKKSERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY
Sequences:
>Translated_469_residues MSAVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEV RWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHKKYPAMLDKIHG VTEETTTGVHRLLDMLAKGELKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSL RQEGMIVKVTEVDPICAMQACMDGFELVSPFIDGENDGTEASIDKALLGKIDLIVTTTGNVNVCDSNMLKALKKRAVVCN IGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGPGSFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIF LFEQKYADLAPAKKSERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY >Mature_468_residues SAVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVR WSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHKKYPAMLDKIHGV TEETTTGVHRLLDMLAKGELKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSLR QEGMIVKVTEVDPICAMQACMDGFELVSPFIDGENDGTEASIDKALLGKIDLIVTTTGNVNVCDSNMLKALKKRAVVCNI GHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGPGSFDAQNDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFL FEQKYADLAPAKKSERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=460, Percent_Identity=56.7391304347826, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI239937451, Length=438, Percent_Identity=55.9360730593607, Blast_Score=441, Evalue=1e-124, Organism=Homo sapiens, GI298286489, Length=460, Percent_Identity=48.0434782608696, Blast_Score=421, Evalue=1e-118, Organism=Homo sapiens, GI195539337, Length=461, Percent_Identity=48.1561822125813, Blast_Score=421, Evalue=1e-118, Organism=Homo sapiens, GI24308043, Length=461, Percent_Identity=48.1561822125813, Blast_Score=421, Evalue=1e-117, Organism=Homo sapiens, GI195539349, Length=460, Percent_Identity=48.0434782608696, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI21361647, Length=460, Percent_Identity=47.1739130434783, Blast_Score=399, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17506425, Length=459, Percent_Identity=58.3877995642701, Blast_Score=504, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6320882, Length=472, Percent_Identity=54.6610169491525, Blast_Score=466, Evalue=1e-132, Organism=Drosophila melanogaster, GI24642172, Length=462, Percent_Identity=58.008658008658, Blast_Score=478, Evalue=1e-135, Organism=Drosophila melanogaster, GI24656245, Length=462, Percent_Identity=47.4025974025974, Blast_Score=412, Evalue=1e-115, Organism=Drosophila melanogaster, GI45553387, Length=460, Percent_Identity=48.2608695652174, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI45553385, Length=459, Percent_Identity=48.1481481481481, Blast_Score=389, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51421; Mature: 51290
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCI CCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHH HMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCI HHHHHHHHHHHHHHHCCCCEEECCCCEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHH EQTILKDGQPWDANMILDDGGDLTEIIHKKYPAMLDKIHGVTEETTTGVHRLLDMLAKGE HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC LKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSL EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCEEEEEECCCCCCCHHHHH RQEGMIVKVTEVDPICAMQACMDGFELVSPFIDGENDGTEASIDKALLGKIDLIVTTTGN HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEECCC VNVCDSNMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGPGSFDAQ CEECCHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCCCHHHHCHHHHHHHCCCCCCCCCC NDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKYADLAPAKKSERLTV CCCEEEEEECCCEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE EVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY EECCHHCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure SAVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCI CCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHH HMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCI HHHHHHHHHHHHHHHCCCCEEECCCCEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHH EQTILKDGQPWDANMILDDGGDLTEIIHKKYPAMLDKIHGVTEETTTGVHRLLDMLAKGE HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC LKIPAINVNDSVTKSKNDNKYGCRHSLNDAIKRGTDHLLSGKQALVIGYGDVGKGSAQSL EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHCCCEEEEEECCCCCCCHHHHH RQEGMIVKVTEVDPICAMQACMDGFELVSPFIDGENDGTEASIDKALLGKIDLIVTTTGN HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEECCC VNVCDSNMLKALKKRAVVCNIGHFDNEIDTAFMRKNWAWEEVKPQVHKIHRTGPGSFDAQ CEECCHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCCCHHHHCHHHHHHHCCCCCCCCCC NDDYLILLAEGRLVNLGNATGHPSRIMDGSFANQVLAQIFLFEQKYADLAPAKKSERLTV CCCEEEEEECCCEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE EVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY EECCHHCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA