BacMap

Definition	Pseudomonas syringae pv. syringae B728a, complete genome.
Accession	NC_007005
Length	6,093,698

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The map label for this gene is fabG [H]

Identifier: 66043690

GI number: 66043690

Start: 462773

End: 463501

Strand: Reverse

Name: fabG [H]

Synonym: Psyr_0423

Alternate gene names: 66043690

Gene position: 463501-462773 (Counterclockwise)

Preceding gene: 66043691

Following gene: 66043689

Centisome position: 7.61

GC content: 63.65

Gene sequence:

>729_bases
ATGACTGAATCGATACTGGTCACCGGCTCCAGCCGTGGCATTGGCCGCGCCATCGCCCTGCGTCTGGCGCAGGCCGGATA
CGACCTGATCCTGCATTGCCGCACCGGCCGCAGCGAAGCCGAAGCGGTGCAGGCCGAAGTCGTTGCGCTGGGCCGTCAGG
CACGCGTGCTGCAATTCGATGTCTCGGACCGGGCCGCCTGCAAGGCCGTTCTGGAACAGGACGTGGAGACGCACGGCGCC
TATTACGGCGTGGTGCTCAACGCCGGGCTGACCCGCGACGGCGCGTTTCCGGCGCTCAGCGACGATGACTGGGATCAGGT
GCTGCGCACCAACCTGGACGGCTTCTATAACGTCCTGCACCCGTTGACGATGCCGATGATTCGCCGTCGTACAGCAGGGC
GCATCGTCTGCATCACTTCGGTTTCCGGGCTGATCGGCAACCGCGGCCAGGTCAATTACAGCGCTTCCAAGGCAGGGCTT
ATCGGTGCTGCCAAGGCCCTGGCTATCGAGCTGGGCAAGCGCAAGATCACCGTCAACTGCGTCGCGCCGGGGCTGATCGA
TACCGCCATGCTCGACGAGAACGTGCCGGTGGACGAACTGCTGAAAATGATTCCGGCACAACGCATGGGCACGCCCGAGG
AAGTGGCGGGTGCGGTGAATTTTCTGATGTCGACCGAAGCGAGCTACATCACTCGTCAGGTTCTGGCCGTCAACGGGGGA
CTGTGCTGA

Upstream 100 bases:

>100_bases
TCGAATGCACCCTCACCGGTCCGGGTATCGAGGCTTTTGCCCGACTCAATGTATATTGCCCGCCCAATACTGCTGACTAC
CTGGCTGAAGGAGCCCCGGC

Downstream 100 bases:

>100_bases
TGAAGCGTGTGGTAGTGACCGGCATGTCCGGCATCACCTCGGTAGGCAGCGACTGGCCGACTATCGATGCACGCTTTACG
GCCAATCGCAGCGGCATTCG

Product: 3-ketoacyl-(acyl-carrier-protein) reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTESILVTGSSRGIGRAIALRLAQAGYDLILHCRTGRSEAEAVQAEVVALGRQARVLQFDVSDRAACKAVLEQDVETHGA
YYGVVLNAGLTRDGAFPALSDDDWDQVLRTNLDGFYNVLHPLTMPMIRRRTAGRIVCITSVSGLIGNRGQVNYSASKAGL
IGAAKALAIELGKRKITVNCVAPGLIDTAMLDENVPVDELLKMIPAQRMGTPEEVAGAVNFLMSTEASYITRQVLAVNGG
LC

Sequences:

>Translated_242_residues
MTESILVTGSSRGIGRAIALRLAQAGYDLILHCRTGRSEAEAVQAEVVALGRQARVLQFDVSDRAACKAVLEQDVETHGA
YYGVVLNAGLTRDGAFPALSDDDWDQVLRTNLDGFYNVLHPLTMPMIRRRTAGRIVCITSVSGLIGNRGQVNYSASKAGL
IGAAKALAIELGKRKITVNCVAPGLIDTAMLDENVPVDELLKMIPAQRMGTPEEVAGAVNFLMSTEASYITRQVLAVNGG
LC
>Mature_241_residues
TESILVTGSSRGIGRAIALRLAQAGYDLILHCRTGRSEAEAVQAEVVALGRQARVLQFDVSDRAACKAVLEQDVETHGAY
YGVVLNAGLTRDGAFPALSDDDWDQVLRTNLDGFYNVLHPLTMPMIRRRTAGRIVCITSVSGLIGNRGQVNYSASKAGLI
GAAKALAIELGKRKITVNCVAPGLIDTAMLDENVPVDELLKMIPAQRMGTPEEVAGAVNFLMSTEASYITRQVLAVNGGL
C

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=38.7096774193548, Blast_Score=142, Evalue=2e-34,
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=38.8429752066116, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=34.8360655737705, Blast_Score=112, Evalue=2e-25,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=32.8, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI4504505, Length=187, Percent_Identity=36.3636363636364, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=31.9838056680162, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI5031737, Length=239, Percent_Identity=30.1255230125523, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI66933014, Length=201, Percent_Identity=28.8557213930348, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI59889578, Length=190, Percent_Identity=33.1578947368421, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=29.9595141700405, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI7657478, Length=193, Percent_Identity=34.1968911917098, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI223718074, Length=217, Percent_Identity=30.8755760368664, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI4503301, Length=209, Percent_Identity=26.7942583732057, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=26.5560165975104, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI209862901, Length=210, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI19923983, Length=210, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI33667109, Length=184, Percent_Identity=29.3478260869565, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=30.3867403314917, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=44.3514644351464, Blast_Score=168, Evalue=3e-43,
Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=34.136546184739, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=32.9218106995885, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI2367175, Length=242, Percent_Identity=35.5371900826446, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=33.0578512396694, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=29.6296296296296, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=34.156378600823, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI87082160, Length=244, Percent_Identity=27.8688524590164, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=30.8, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1789378, Length=243, Percent_Identity=29.2181069958848, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=29.8755186721992, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786701, Length=195, Percent_Identity=32.3076923076923, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1789057, Length=171, Percent_Identity=29.2397660818713, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787526, Length=231, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=37.2950819672131, Blast_Score=138, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25147288, Length=240, Percent_Identity=34.1666666666667, Blast_Score=123, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=32.2448979591837, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=31.1740890688259, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17568967, Length=186, Percent_Identity=31.7204301075269, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17561402, Length=245, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=29.9595141700405, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=29.4354838709677, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=244, Percent_Identity=27.4590163934426, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=27.1794871794872, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=27.8625954198473, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=243, Percent_Identity=27.5720164609054, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=25.9541984732824, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=259, Percent_Identity=28.957528957529, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=264, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=29.1828793774319, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=192, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=26.8, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=196, Percent_Identity=26.530612244898, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=206, Percent_Identity=26.2135922330097, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=26.5384615384615, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=245, Percent_Identity=28.9795918367347, Blast_Score=92, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6324126, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322227, Length=200, Percent_Identity=30, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24639444, Length=242, Percent_Identity=35.5371900826446, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=35.1239669421488, Blast_Score=114, Evalue=4e-26,
Organism=Drosophila melanogaster, GI21357041, Length=244, Percent_Identity=31.9672131147541, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI28571526, Length=244, Percent_Identity=31.9672131147541, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=30.6122448979592, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=33.1967213114754, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=32.5, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI18859837, Length=186, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI116007236, Length=230, Percent_Identity=30.8695652173913, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=31.3492063492063, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24644337, Length=208, Percent_Identity=27.8846153846154, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR011285
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25815; Mature: 25684

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESILVTGSSRGIGRAIALRLAQAGYDLILHCRTGRSEAEAVQAEVVALGRQARVLQFD
CCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
VSDRAACKAVLEQDVETHGAYYGVVLNAGLTRDGAFPALSDDDWDQVLRTNLDGFYNVLH
CCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHH
PLTMPMIRRRTAGRIVCITSVSGLIGNRGQVNYSASKAGLIGAAKALAIELGKRKITVNC
HHHHHHHHHHCCCCEEEEEECHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEEEE
VAPGLIDTAMLDENVPVDELLKMIPAQRMGTPEEVAGAVNFLMSTEASYITRQVLAVNGG
ECCCHHHHHHHCCCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
LC
CC
>Mature Secondary Structure 
TESILVTGSSRGIGRAIALRLAQAGYDLILHCRTGRSEAEAVQAEVVALGRQARVLQFD
CCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEE
VSDRAACKAVLEQDVETHGAYYGVVLNAGLTRDGAFPALSDDDWDQVLRTNLDGFYNVLH
CCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHH
PLTMPMIRRRTAGRIVCITSVSGLIGNRGQVNYSASKAGLIGAAKALAIELGKRKITVNC
HHHHHHHHHHCCCCEEEEEECHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEEEE
VAPGLIDTAMLDENVPVDELLKMIPAQRMGTPEEVAGAVNFLMSTEASYITRQVLAVNGG
ECCCHHHHHHHCCCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
LC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9020051 [H]