| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is maeB [H]
Identifier: 66043668
GI number: 66043668
Start: 429120
End: 430388
Strand: Direct
Name: maeB [H]
Synonym: Psyr_0401
Alternate gene names: 66043668
Gene position: 429120-430388 (Clockwise)
Preceding gene: 66043667
Following gene: 66043670
Centisome position: 7.04
GC content: 59.1
Gene sequence:
>1269_bases ATGTCAGATCTGAAAACTGCCGCGCTCGAATACCATGCCAATCCTCGTCCGGGGAAGCTGAGCGTCGAACTCACCAAGCC GACCGCAACCGCTCGTGACCTGGCTCTGGCCTACAGCCCTGGCGTTGCTGAACCCGTGCGTGAAATTGCCCGTGACCCCG AGCTGGCTTACAAGTACACCGGCAAAGGCAATCTGGTAGCAGTTATTTCTGATGGCACCGCGATTCTCGGCCTCGGCGAT CTGGGGCCATTGGCTTCCAAGCCGGTCATGGAAGGTAAGGGCGTTCTGTTCAAGCGCTTCGCCGGTATCGACGTTTTCGA TATCGAAGTCGATTCCGAAAGCCCGCAGGCGTTCATCGACACCGTCAAGCGTATCTCCATCACCTTCGGTGGCATCAACC TGGAAGACATCAAGGCGCCTGAGTGCTTTGAAATCGAGAAGGCGCTGATCGAACAGTGCGACATCCCGGTTTTCCATGAT GACCAGCACGGCACCGCTATCGTGACGGCGGCCGGCATGATCAACGCACTGGAAATCGTCGGCAAGACCCTCGAATCGGC GAAGATCGTCTGCCTGGGCGCTGGCGCTGCAGCCATCTCCTGCATGAAGCTGCTGGTGAGCATGGGCGCGAAGATCGAAA ACATCTTCATGGTCGACCGTACCGGCGTTATCCACTCCGGCCGTACCGACCTGAACCAGTACAAGGCTGCATTCGCTCAC GCTACCGAGAAGCGCTCGCTGACCGATGCACTGGATGGCGCTGACGTATTCGTAGGCCTGTCCGGCCCTAACCTGCTGAG CGCTGAAAACCTCAAGCTGATGGCCAAGGACCCGATCGTGTTCGCTTGCTCGAACCCTGATCCGGAAATCTCCCCGGAAC TGGCTCACGCCACGCGCAGCGATGTGATCATGGCCACTGGCCGTTCGGACTACCCGAACCAGGTCAACAACGTGCTGGGC TTCCCGTTCATCTTCCGCGGTGCTCTGGACGTTCGCGCCAAGCGCATCAACGAAGAAATGAAAATCGCTGCGGCCAACGC CCTGCGCGAACTGGCCAAGCTGCCTGTGCCACAGGAAGTCAGCGACGCCTACGGCGGCATCAAACTGGAATTCGGTCGTG AGTACATCATCCCGAAACCAATGGATACGCGCCTGCTGGGCCTGATCGCCGATGCAGTGGCCAAGGCCGCTATCGAAAGC GGCGTTGCCACCCTGCCTTATCCGAAGCACTACCCGCTGACCAGCGTGGATGACGTGTTCAAGGGCTGA
Upstream 100 bases:
>100_bases CCTATTGACAGCAGTGACTGGCCAGTCTTGTTAGGACTATGCATCTTGCGTATCCTCGGCGGTCCGTCTGTCCCACAGTA AAAAAAGCGGAATCCAATAC
Downstream 100 bases:
>100_bases TCCCTGAGCCAATAAAAAACCCCTGCAGCGATGCAGGGGTTTTTTTATGCCTTGGATACCCTGCACTTGTGGGGCATTTT CGGGATTGAACTGGCCTCTT
Product: malate dehydrogenase
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSDLKTAALEYHANPRPGKLSVELTKPTATARDLALAYSPGVAEPVREIARDPELAYKYTGKGNLVAVISDGTAILGLGD LGPLASKPVMEGKGVLFKRFAGIDVFDIEVDSESPQAFIDTVKRISITFGGINLEDIKAPECFEIEKALIEQCDIPVFHD DQHGTAIVTAAGMINALEIVGKTLESAKIVCLGAGAAAISCMKLLVSMGAKIENIFMVDRTGVIHSGRTDLNQYKAAFAH ATEKRSLTDALDGADVFVGLSGPNLLSAENLKLMAKDPIVFACSNPDPEISPELAHATRSDVIMATGRSDYPNQVNNVLG FPFIFRGALDVRAKRINEEMKIAAANALRELAKLPVPQEVSDAYGGIKLEFGREYIIPKPMDTRLLGLIADAVAKAAIES GVATLPYPKHYPLTSVDDVFKG
Sequences:
>Translated_422_residues MSDLKTAALEYHANPRPGKLSVELTKPTATARDLALAYSPGVAEPVREIARDPELAYKYTGKGNLVAVISDGTAILGLGD LGPLASKPVMEGKGVLFKRFAGIDVFDIEVDSESPQAFIDTVKRISITFGGINLEDIKAPECFEIEKALIEQCDIPVFHD DQHGTAIVTAAGMINALEIVGKTLESAKIVCLGAGAAAISCMKLLVSMGAKIENIFMVDRTGVIHSGRTDLNQYKAAFAH ATEKRSLTDALDGADVFVGLSGPNLLSAENLKLMAKDPIVFACSNPDPEISPELAHATRSDVIMATGRSDYPNQVNNVLG FPFIFRGALDVRAKRINEEMKIAAANALRELAKLPVPQEVSDAYGGIKLEFGREYIIPKPMDTRLLGLIADAVAKAAIES GVATLPYPKHYPLTSVDDVFKG >Mature_421_residues SDLKTAALEYHANPRPGKLSVELTKPTATARDLALAYSPGVAEPVREIARDPELAYKYTGKGNLVAVISDGTAILGLGDL GPLASKPVMEGKGVLFKRFAGIDVFDIEVDSESPQAFIDTVKRISITFGGINLEDIKAPECFEIEKALIEQCDIPVFHDD QHGTAIVTAAGMINALEIVGKTLESAKIVCLGAGAAAISCMKLLVSMGAKIENIFMVDRTGVIHSGRTDLNQYKAAFAHA TEKRSLTDALDGADVFVGLSGPNLLSAENLKLMAKDPIVFACSNPDPEISPELAHATRSDVIMATGRSDYPNQVNNVLGF PFIFRGALDVRAKRINEEMKIAAANALRELAKLPVPQEVSDAYGGIKLEFGREYIIPKPMDTRLLGLIADAVAKAAIESG VATLPYPKHYPLTSVDDVFKG
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=404, Percent_Identity=28.7128712871287, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI62420882, Length=371, Percent_Identity=26.9541778975741, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI62420880, Length=371, Percent_Identity=26.9541778975741, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI239049447, Length=371, Percent_Identity=26.9541778975741, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4505145, Length=347, Percent_Identity=27.3775216138329, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI270265879, Length=321, Percent_Identity=28.0373831775701, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1788806, Length=406, Percent_Identity=60.8374384236453, Blast_Score=484, Evalue=1e-138, Organism=Escherichia coli, GI87081919, Length=288, Percent_Identity=28.8194444444444, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17537199, Length=409, Percent_Identity=28.1173594132029, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI78707242, Length=394, Percent_Identity=26.3959390862944, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI78707238, Length=394, Percent_Identity=26.3959390862944, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24646388, Length=346, Percent_Identity=30.3468208092486, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24646386, Length=346, Percent_Identity=30.3468208092486, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI78707240, Length=392, Percent_Identity=26.2755102040816, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI281362672, Length=457, Percent_Identity=27.3522975929978, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356279, Length=457, Percent_Identity=27.3522975929978, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI281362674, Length=457, Percent_Identity=27.3522975929978, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 45120; Mature: 44989
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLKTAALEYHANPRPGKLSVELTKPTATARDLALAYSPGVAEPVREIARDPELAYKYT CCCHHCCHHEECCCCCCCEEEEEEECCCCCHHHEEEEECCCCHHHHHHHHCCCCEEEEEC GKGNLVAVISDGTAILGLGDLGPLASKPVMEGKGVLFKRFAGIDVFDIEVDSESPQAFID CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEHHHCCCEEEEEEECCCCCHHHHH TVKRISITFGGINLEDIKAPECFEIEKALIEQCDIPVFHDDQHGTAIVTAAGMINALEIV HHHEEEEEECCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEHHHHHHHHHHH GKTLESAKIVCLGAGAAAISCMKLLVSMGAKIENIFMVDRTGVIHSGRTDLNQYKAAFAH HHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCCCHHHHHHHHHH ATEKRSLTDALDGADVFVGLSGPNLLSAENLKLMAKDPIVFACSNPDPEISPELAHATRS HHHHHHHHHHCCCCEEEEECCCCCEECCCCCEEEECCCEEEEECCCCCCCCCHHHHCCCC DVIMATGRSDYPNQVNNVLGFPFIFRGALDVRAKRINEEMKIAAANALRELAKLPVPQEV CEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHH SDAYGGIKLEFGREYIIPKPMDTRLLGLIADAVAKAAIESGVATLPYPKHYPLTSVDDVF HHHHCCEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHH KG CC >Mature Secondary Structure SDLKTAALEYHANPRPGKLSVELTKPTATARDLALAYSPGVAEPVREIARDPELAYKYT CCHHCCHHEECCCCCCCEEEEEEECCCCCHHHEEEEECCCCHHHHHHHHCCCCEEEEEC GKGNLVAVISDGTAILGLGDLGPLASKPVMEGKGVLFKRFAGIDVFDIEVDSESPQAFID CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEHHHCCCEEEEEEECCCCCHHHHH TVKRISITFGGINLEDIKAPECFEIEKALIEQCDIPVFHDDQHGTAIVTAAGMINALEIV HHHEEEEEECCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEHHHHHHHHHHH GKTLESAKIVCLGAGAAAISCMKLLVSMGAKIENIFMVDRTGVIHSGRTDLNQYKAAFAH HHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCEEECCCCCHHHHHHHHHH ATEKRSLTDALDGADVFVGLSGPNLLSAENLKLMAKDPIVFACSNPDPEISPELAHATRS HHHHHHHHHHCCCCEEEEECCCCCEECCCCCEEEECCCEEEEECCCCCCCCCHHHHCCCC DVIMATGRSDYPNQVNNVLGFPFIFRGALDVRAKRINEEMKIAAANALRELAKLPVPQEV CEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHH SDAYGGIKLEFGREYIIPKPMDTRLLGLIADAVAKAAIESGVATLPYPKHYPLTSVDDVF HHHHCCEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHH KG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]