| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is glgP [H]
Identifier: 66043641
GI number: 66043641
Start: 397612
End: 400062
Strand: Reverse
Name: glgP [H]
Synonym: Psyr_0374
Alternate gene names: 66043641
Gene position: 400062-397612 (Counterclockwise)
Preceding gene: 66043646
Following gene: 66043640
Centisome position: 6.57
GC content: 61.57
Gene sequence:
>2451_bases ATGTCTCAGGAACCACTTGTTCGTGACGCTGATGTGGCCGCTTTTCGCGCCGCTGTGCTCGCCAAACTCACCTATTCGGT GGGCAAGGACCCCGACCATGCGTTTGAGCATGACTGGTTTGAAGCTGTTGCCCTTGCCGCCCGCGACCATATGGTCGAAC ACTGGATGGACCATACGCGGCAGATCTATCGCAAGGTTCAGAAACGCGTTTACTACCTGTCTCTCGAATTCCTGATAGGC AGGCTGCTGTACGACAGCCTGAGTAACCTGGGCCTGCTCGAAGTCGCTCGCGAGGCCTTGACCGAGCTGGGTGTGGACAT CGAACGTATCCGCCTGCTTGAACCGGATGCGGCACTGGGCAACGGCGGCCTGGGTCGTCTGGCCGCGTGCTTCATGGAAA GCATGTCGACCCTGGGCATCGCGGGTCATGGTTACGGCATTCGTTACGAGCACGGCCTGTTTCGTCAGGGCATCGTCGAT GGCTGGCAGCAGGAACAGACCGAGAACTGGCTGGACTTCGGTAACCCATGGGAATTCGAACGCCCTGAGGTGGTGTACTC CATCGGCTTCGGCGGCAGTGTCGACACCGTCCCGACCGAAGCGGGCGATTCGCGTCAGGTATGGCGTCCGGGCGAGACCG TTCGGGCCATCGCCTATGACACCCCGGTGGTGGGCTGGCGCGGTAAGAGCGTCAACACCCTGCGCCTGTGGCGCGCCCGT GCGGTAGAAGACCTGCACCTGGAACGCTTCAACGCCGGTGATCACTTCGGCGCCGTGGCCGAAGTGGTGCGCGCCGAAAG TATTTCCCGCGTGCTTTACCCGAACGATGCGACCGAAGCCGGTCAGGAACTGCGTCTGCGTCAGGAATACTTTTTCGTTT CCGCGTCGCTGCAGGACTTGCTGCGCCGCCATCTGAACCAGCACGCCACACTGACGGATCTGTCCGAGCACGCGGCGATT CAGATGAACGACACGCACCCCTCGATCGCCGTGGCCGAGCTGATGCGTCAGTTGATCGACAACCACAACATCCCGTGGGA CACCGCGTGGAAAATCACCGTCGGCACCCTCGGCTACACCAACCACACTCTGTTGCCTGAAGCACTGGAGACCTGGTCGG TCGGTCTGATGGAGCGGATGCTGCCGCGCCACATGCAGATCATCTACCTGATCAACGCGCAGCACATCGACACACTGCGC GCCAAGGGTGTCGACGACGTCAACGTGCTGCGCGCGGTATCGCTGATCGAAGAAGACAACGGTCGTCGGGTACGCATGGG CAACCTGGCCTTCCTCGGCTCGCACAGCGTCAACGGCGTTTCGGCGCTGCACACCCAACTGATGCGCAAGACCGTATTCG CCGAGCTGCACAAGATCTATCCGGAGCGGATCAACAACAAGACCAACGGCATCACCTTCCGCCGCTGGCTGTTCCAGGCC AACCCGAAGCTGACCGAGATGCTTGTCGAGTCGCTCGGCGAGGATGTTCTGGACAACGCCGAGACGCGCCTCAAAGAGCT TGAGCCGTTCGCCGAGAAGTCGTCGTTCCGCAAGCAGATGGCCGATCAACGCCTGCACAGCAAGCGTGCGCTGGCCGCGA TCATTCATGAACGCCTGGGCATTGCCGTCAACCCTGCCGCGATGTTCGACGTTCAGGTCAAGCGCATCCACGAGTACAAG CGCCAGCTGCTGAACCTGTTCCACACCGTCGCCCTGTATCAGGCCATTCGGGCCGAGCCGGGGACCGATTGGGTGCCGCG GGTGAAGATCTTCGCCGGCAAAGCGGCGGCCAGCTATCACTCGGCCAAACTGATCATCAAGCTGACCAACGACATCGCGC GGACCGTGAACAACGATCCGACCGTACGCGGTCTGCTGAAAGTGGTGTTCATGCCCAACTACAACGTCAGCCTGGCGGAG AGCATCATTCCGGCGGCCGACCTGTCCGAGCAGATATCCACCGCAGGCCTGGAAGCGTCCGGGACCAGCAACATGAAGTT CGGCCTCAACGGCGCACTGACCATCGGTACGCTGGACGGTGCCAACGTGGAAATGAGCGAGCAGGTCGGGCTGGAGCACA TGTTCATCTTCGGCATGTCTTCGCAACAGGTCGAAGCCCGCAAGCAGGCAGGTGAGTTCAGCGCGCATGACGACGTGGCC GCTTCCGGACGCTTGAACGATGTGCTGCAGGCGATCCGGGGCGGTGTGTTCTCGCCGGATGATCCGAACCGTTATGTGGG CCTGATCGATCAGTTGCTGGCGTATGACCGTTTCCTGGTCTGCGCTGACTTCGACTCGTACTGGGCGGCCCAGGCCAAGG TCGAAGAGCGCTGGCACGACTCCAAGGAATGGTGGCGCTCGGCGGTCCTCAACACCGCACGCATGGGCTGGTTCTCCTCG GACCGGACCATCCGCGAGTACGCCGGAGACATCTGGAAGGCGCTGGAGTGA
Upstream 100 bases:
>100_bases TGCCATGAATTATTTCGCTTTTTTTCAGGAAATAATTGACGACACGCCTACAGTCTAAGAATCCCGTTTTTCATTCGTCA GACTACTTGAGGTTTTACCG
Downstream 100 bases:
>100_bases CGTTAAAGTTCGAAAAAACGTAGTGTGGGAGCGAGCTTGCTCGCGAAGAGGCCAGTAATGCCTCGGAAAGAAGGCGTTTG AACCAGCGTCTTCGTGAGCA
Product: phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 816; Mature: 815
Protein sequence:
>816_residues MSQEPLVRDADVAAFRAAVLAKLTYSVGKDPDHAFEHDWFEAVALAARDHMVEHWMDHTRQIYRKVQKRVYYLSLEFLIG RLLYDSLSNLGLLEVAREALTELGVDIERIRLLEPDAALGNGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQGIVD GWQQEQTENWLDFGNPWEFERPEVVYSIGFGGSVDTVPTEAGDSRQVWRPGETVRAIAYDTPVVGWRGKSVNTLRLWRAR AVEDLHLERFNAGDHFGAVAEVVRAESISRVLYPNDATEAGQELRLRQEYFFVSASLQDLLRRHLNQHATLTDLSEHAAI QMNDTHPSIAVAELMRQLIDNHNIPWDTAWKITVGTLGYTNHTLLPEALETWSVGLMERMLPRHMQIIYLINAQHIDTLR AKGVDDVNVLRAVSLIEEDNGRRVRMGNLAFLGSHSVNGVSALHTQLMRKTVFAELHKIYPERINNKTNGITFRRWLFQA NPKLTEMLVESLGEDVLDNAETRLKELEPFAEKSSFRKQMADQRLHSKRALAAIIHERLGIAVNPAAMFDVQVKRIHEYK RQLLNLFHTVALYQAIRAEPGTDWVPRVKIFAGKAAASYHSAKLIIKLTNDIARTVNNDPTVRGLLKVVFMPNYNVSLAE SIIPAADLSEQISTAGLEASGTSNMKFGLNGALTIGTLDGANVEMSEQVGLEHMFIFGMSSQQVEARKQAGEFSAHDDVA ASGRLNDVLQAIRGGVFSPDDPNRYVGLIDQLLAYDRFLVCADFDSYWAAQAKVEERWHDSKEWWRSAVLNTARMGWFSS DRTIREYAGDIWKALE
Sequences:
>Translated_816_residues MSQEPLVRDADVAAFRAAVLAKLTYSVGKDPDHAFEHDWFEAVALAARDHMVEHWMDHTRQIYRKVQKRVYYLSLEFLIG RLLYDSLSNLGLLEVAREALTELGVDIERIRLLEPDAALGNGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQGIVD GWQQEQTENWLDFGNPWEFERPEVVYSIGFGGSVDTVPTEAGDSRQVWRPGETVRAIAYDTPVVGWRGKSVNTLRLWRAR AVEDLHLERFNAGDHFGAVAEVVRAESISRVLYPNDATEAGQELRLRQEYFFVSASLQDLLRRHLNQHATLTDLSEHAAI QMNDTHPSIAVAELMRQLIDNHNIPWDTAWKITVGTLGYTNHTLLPEALETWSVGLMERMLPRHMQIIYLINAQHIDTLR AKGVDDVNVLRAVSLIEEDNGRRVRMGNLAFLGSHSVNGVSALHTQLMRKTVFAELHKIYPERINNKTNGITFRRWLFQA NPKLTEMLVESLGEDVLDNAETRLKELEPFAEKSSFRKQMADQRLHSKRALAAIIHERLGIAVNPAAMFDVQVKRIHEYK RQLLNLFHTVALYQAIRAEPGTDWVPRVKIFAGKAAASYHSAKLIIKLTNDIARTVNNDPTVRGLLKVVFMPNYNVSLAE SIIPAADLSEQISTAGLEASGTSNMKFGLNGALTIGTLDGANVEMSEQVGLEHMFIFGMSSQQVEARKQAGEFSAHDDVA ASGRLNDVLQAIRGGVFSPDDPNRYVGLIDQLLAYDRFLVCADFDSYWAAQAKVEERWHDSKEWWRSAVLNTARMGWFSS DRTIREYAGDIWKALE >Mature_815_residues SQEPLVRDADVAAFRAAVLAKLTYSVGKDPDHAFEHDWFEAVALAARDHMVEHWMDHTRQIYRKVQKRVYYLSLEFLIGR LLYDSLSNLGLLEVAREALTELGVDIERIRLLEPDAALGNGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQGIVDG WQQEQTENWLDFGNPWEFERPEVVYSIGFGGSVDTVPTEAGDSRQVWRPGETVRAIAYDTPVVGWRGKSVNTLRLWRARA VEDLHLERFNAGDHFGAVAEVVRAESISRVLYPNDATEAGQELRLRQEYFFVSASLQDLLRRHLNQHATLTDLSEHAAIQ MNDTHPSIAVAELMRQLIDNHNIPWDTAWKITVGTLGYTNHTLLPEALETWSVGLMERMLPRHMQIIYLINAQHIDTLRA KGVDDVNVLRAVSLIEEDNGRRVRMGNLAFLGSHSVNGVSALHTQLMRKTVFAELHKIYPERINNKTNGITFRRWLFQAN PKLTEMLVESLGEDVLDNAETRLKELEPFAEKSSFRKQMADQRLHSKRALAAIIHERLGIAVNPAAMFDVQVKRIHEYKR QLLNLFHTVALYQAIRAEPGTDWVPRVKIFAGKAAASYHSAKLIIKLTNDIARTVNNDPTVRGLLKVVFMPNYNVSLAES IIPAADLSEQISTAGLEASGTSNMKFGLNGALTIGTLDGANVEMSEQVGLEHMFIFGMSSQQVEARKQAGEFSAHDDVAA SGRLNDVLQAIRGGVFSPDDPNRYVGLIDQLLAYDRFLVCADFDSYWAAQAKVEERWHDSKEWWRSAVLNTARMGWFSSD RTIREYAGDIWKALE
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=811, Percent_Identity=47.5955610357583, Blast_Score=753, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=810, Percent_Identity=47.9012345679012, Blast_Score=744, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=798, Percent_Identity=47.3684210526316, Blast_Score=731, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=810, Percent_Identity=45.679012345679, Blast_Score=691, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=665, Percent_Identity=46.7669172932331, Blast_Score=623, Evalue=1e-178, Organism=Escherichia coli, GI2367228, Length=802, Percent_Identity=48.8778054862843, Blast_Score=773, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=757, Percent_Identity=45.8388375165125, Blast_Score=648, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=813, Percent_Identity=48.2164821648216, Blast_Score=767, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=813, Percent_Identity=48.2164821648216, Blast_Score=766, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=812, Percent_Identity=45.1970443349754, Blast_Score=651, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=798, Percent_Identity=47.4937343358396, Blast_Score=755, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=798, Percent_Identity=47.4937343358396, Blast_Score=755, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 91997; Mature: 91865
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEPLVRDADVAAFRAAVLAKLTYSVGKDPDHAFEHDWFEAVALAARDHMVEHWMDHTR CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIYRKVQKRVYYLSLEFLIGRLLYDSLSNLGLLEVAREALTELGVDIERIRLLEPDAALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHEEECCCCCCC NGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQGIVDGWQQEQTENWLDFGNPWEFE CCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC RPEVVYSIGFGGSVDTVPTEAGDSRQVWRPGETVRAIAYDTPVVGWRGKSVNTLRLWRAR CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH AVEDLHLERFNAGDHFGAVAEVVRAESISRVLYPNDATEAGQELRLRQEYFFVSASLQDL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHH LRRHLNQHATLTDLSEHAAIQMNDTHPSIAVAELMRQLIDNHNIPWDTAWKITVGTLGYT HHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC NHTLLPEALETWSVGLMERMLPRHMQIIYLINAQHIDTLRAKGVDDVNVLRAVSLIEEDN CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCC GRRVRMGNLAFLGSHSVNGVSALHTQLMRKTVFAELHKIYPERINNKTNGITFRRWLFQA CCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHC NPKLTEMLVESLGEDVLDNAETRLKELEPFAEKSSFRKQMADQRLHSKRALAAIIHERLG CCHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IAVNPAAMFDVQVKRIHEYKRQLLNLFHTVALYQAIRAEPGTDWVPRVKIFAGKAAASYH CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHCCC SAKLIIKLTNDIARTVNNDPTVRGLLKVVFMPNYNVSLAESIIPAADLSEQISTAGLEAS CEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCC GTSNMKFGLNGALTIGTLDGANVEMSEQVGLEHMFIFGMSSQQVEARKQAGEFSAHDDVA CCCCCEECCCCEEEEEECCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC ASGRLNDVLQAIRGGVFSPDDPNRYVGLIDQLLAYDRFLVCADFDSYWAAQAKVEERWHD CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCC SKEWWRSAVLNTARMGWFSSDRTIREYAGDIWKALE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SQEPLVRDADVAAFRAAVLAKLTYSVGKDPDHAFEHDWFEAVALAARDHMVEHWMDHTR CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIYRKVQKRVYYLSLEFLIGRLLYDSLSNLGLLEVAREALTELGVDIERIRLLEPDAALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHEEECCCCCCC NGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQGIVDGWQQEQTENWLDFGNPWEFE CCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCC RPEVVYSIGFGGSVDTVPTEAGDSRQVWRPGETVRAIAYDTPVVGWRGKSVNTLRLWRAR CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH AVEDLHLERFNAGDHFGAVAEVVRAESISRVLYPNDATEAGQELRLRQEYFFVSASLQDL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHH LRRHLNQHATLTDLSEHAAIQMNDTHPSIAVAELMRQLIDNHNIPWDTAWKITVGTLGYT HHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC NHTLLPEALETWSVGLMERMLPRHMQIIYLINAQHIDTLRAKGVDDVNVLRAVSLIEEDN CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCC GRRVRMGNLAFLGSHSVNGVSALHTQLMRKTVFAELHKIYPERINNKTNGITFRRWLFQA CCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHC NPKLTEMLVESLGEDVLDNAETRLKELEPFAEKSSFRKQMADQRLHSKRALAAIIHERLG CCHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IAVNPAAMFDVQVKRIHEYKRQLLNLFHTVALYQAIRAEPGTDWVPRVKIFAGKAAASYH CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHCCC SAKLIIKLTNDIARTVNNDPTVRGLLKVVFMPNYNVSLAESIIPAADLSEQISTAGLEAS CEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCC GTSNMKFGLNGALTIGTLDGANVEMSEQVGLEHMFIFGMSSQQVEARKQAGEFSAHDDVA CCCCCEECCCCEEEEEECCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC ASGRLNDVLQAIRGGVFSPDDPNRYVGLIDQLLAYDRFLVCADFDSYWAAQAKVEERWHD CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCC SKEWWRSAVLNTARMGWFSSDRTIREYAGDIWKALE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]