| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043601
Identifier: 66043601
GI number: 66043601
Start: 351980
End: 353011
Strand: Direct
Name: 66043601
Synonym: Psyr_0332
Alternate gene names: NA
Gene position: 351980-353011 (Clockwise)
Preceding gene: 66043600
Following gene: 66043602
Centisome position: 5.78
GC content: 55.14
Gene sequence:
>1032_bases ATGAAGACGTCACTCCAGCCAAATGTCGACACGCCCCTCGACCGTGACCTGCAACAGAGTGCGATGCTGAAACTTGCAGG ACACTTCCACAGTCTGGCAACAGGTGCCACTCAAGTGCCCTTGCAGTCCCTGGACAGTCATCTACGGTGCGAGATCCAGG ACCCGCAGGTCCTTGATTACCACGATCGACTCATCTCGGGTGCCGGGCCATTATTTTCCCACTTTCTGGCCAGCGTGCCC TACATCCTTGAGGAACTGGCCAGAGTCGGCGTTGCGCTGGCCCGTTTTGCTCAGCTAAATAGCAGGGAAACAGGCCAAAC CTTCAGCCTGTTTGAAGTGGACGCCTTTGACGGAAGTAACGGCCGCGCACTCGCGGGTCATTCGCATGGCTTGATTCAAA GCTTTACGTCCTCTCCGAACGCGGCCAATCAGATTACCTTCAATCGGCATGCCGACCCGGCGTTGTCGTTGTTCTTTGCG CAGTCGGTGTTCAAGGTAACAGGCGCTCTGTTGGCGACCCCCGAATACGATCGCTTCAGGGGGGGATTCGACTTCATCTA TGAGATGGCCGCATTCCAGTTCTATACCCGTGACCGCGTTGGCCAGATTTCCCACATCAAGCAGTTTCTGAAGCCGGGCG GCCTGGTATTTTTTCTGGAGAAGCTCGATCACCCCGATCCGGAAGAATACCTTTTGCGGGAGCGGATCAAGGATGAGCAG TTCAAGACCCGCTACTTCAGTGAAGAAGAGATACGCTGGAAGCGCCAGCAGATGCTCGAATACATGCAAAACGGTCAAGT CACGCTGGAAGCGCTGGTGAGCGCTCTTTGCGCTCGCTTCAAATGTGTGCACCTGCTATGGAGCAGCAGCAACTTCTGTG AGTTCGTTGCCTCGGACGACCCGCAACAGTTAGAACAGTTTCTGGATCTACTGGGCCCGACAGTCCAGCCAGCGGATTTT TGCTTTGAACGTTCGCGTCTTGGCGCCATAGCTCCTTCGCAAAAAGGTGTTGTGGAGTTTGGCGATGCTTGA
Upstream 100 bases:
>100_bases CACATGGTCCCGACTCAGTGCGTGTTTCTTGAGGCTCTGCCAAAAACCGATTCGGGCAAGTTTTCCGCCAAAGGACTGAT CTGATAGAAGGAGCTATGCC
Downstream 100 bases:
>100_bases GCCTGCCGAGCAAGCGTTCCAGCGTAACGTAGTGTCCTTGATGTGTCAGCGGGCGGTCGCGTATCTGCCTTTGTGGCGAG AGCGGGCTGCTGTGGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKTSLQPNVDTPLDRDLQQSAMLKLAGHFHSLATGATQVPLQSLDSHLRCEIQDPQVLDYHDRLISGAGPLFSHFLASVP YILEELARVGVALARFAQLNSRETGQTFSLFEVDAFDGSNGRALAGHSHGLIQSFTSSPNAANQITFNRHADPALSLFFA QSVFKVTGALLATPEYDRFRGGFDFIYEMAAFQFYTRDRVGQISHIKQFLKPGGLVFFLEKLDHPDPEEYLLRERIKDEQ FKTRYFSEEEIRWKRQQMLEYMQNGQVTLEALVSALCARFKCVHLLWSSSNFCEFVASDDPQQLEQFLDLLGPTVQPADF CFERSRLGAIAPSQKGVVEFGDA
Sequences:
>Translated_343_residues MKTSLQPNVDTPLDRDLQQSAMLKLAGHFHSLATGATQVPLQSLDSHLRCEIQDPQVLDYHDRLISGAGPLFSHFLASVP YILEELARVGVALARFAQLNSRETGQTFSLFEVDAFDGSNGRALAGHSHGLIQSFTSSPNAANQITFNRHADPALSLFFA QSVFKVTGALLATPEYDRFRGGFDFIYEMAAFQFYTRDRVGQISHIKQFLKPGGLVFFLEKLDHPDPEEYLLRERIKDEQ FKTRYFSEEEIRWKRQQMLEYMQNGQVTLEALVSALCARFKCVHLLWSSSNFCEFVASDDPQQLEQFLDLLGPTVQPADF CFERSRLGAIAPSQKGVVEFGDA >Mature_343_residues MKTSLQPNVDTPLDRDLQQSAMLKLAGHFHSLATGATQVPLQSLDSHLRCEIQDPQVLDYHDRLISGAGPLFSHFLASVP YILEELARVGVALARFAQLNSRETGQTFSLFEVDAFDGSNGRALAGHSHGLIQSFTSSPNAANQITFNRHADPALSLFFA QSVFKVTGALLATPEYDRFRGGFDFIYEMAAFQFYTRDRVGQISHIKQFLKPGGLVFFLEKLDHPDPEEYLLRERIKDEQ FKTRYFSEEEIRWKRQQMLEYMQNGQVTLEALVSALCARFKCVHLLWSSSNFCEFVASDDPQQLEQFLDLLGPTVQPADF CFERSRLGAIAPSQKGVVEFGDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38655; Mature: 38655
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSLQPNVDTPLDRDLQQSAMLKLAGHFHSLATGATQVPLQSLDSHLRCEIQDPQVLDY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCCCEEECCCCCHHHH HDRLISGAGPLFSHFLASVPYILEELARVGVALARFAQLNSRETGQTFSLFEVDAFDGSN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC GRALAGHSHGLIQSFTSSPNAANQITFNRHADPALSLFFAQSVFKVTGALLATPEYDRFR CCEECCCCCHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC GGFDFIYEMAAFQFYTRDRVGQISHIKQFLKPGGLVFFLEKLDHPDPEEYLLRERIKDEQ CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHH FKTRYFSEEEIRWKRQQMLEYMQNGQVTLEALVSALCARFKCVHLLWSSSNFCEFVASDD HHHHCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC PQQLEQFLDLLGPTVQPADFCFERSRLGAIAPSQKGVVEFGDA HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCC >Mature Secondary Structure MKTSLQPNVDTPLDRDLQQSAMLKLAGHFHSLATGATQVPLQSLDSHLRCEIQDPQVLDY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCCCEEECCCCCHHHH HDRLISGAGPLFSHFLASVPYILEELARVGVALARFAQLNSRETGQTFSLFEVDAFDGSN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC GRALAGHSHGLIQSFTSSPNAANQITFNRHADPALSLFFAQSVFKVTGALLATPEYDRFR CCEECCCCCHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHC GGFDFIYEMAAFQFYTRDRVGQISHIKQFLKPGGLVFFLEKLDHPDPEEYLLRERIKDEQ CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHH FKTRYFSEEEIRWKRQQMLEYMQNGQVTLEALVSALCARFKCVHLLWSSSNFCEFVASDD HHHHCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC PQQLEQFLDLLGPTVQPADFCFERSRLGAIAPSQKGVVEFGDA HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA