Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66043598

Identifier: 66043598

GI number: 66043598

Start: 347986

End: 349239

Strand: Reverse

Name: 66043598

Synonym: Psyr_0329

Alternate gene names: NA

Gene position: 349239-347986 (Counterclockwise)

Preceding gene: 66043605

Following gene: 66043593

Centisome position: 5.73

GC content: 60.13

Gene sequence:

>1254_bases
ATGTACTCGTCGCCAGGATCCTCGACCGCTCTGGTCGCCTTGCTGATAGCTCTGCTCACAGGCTGTAGCGGAGCACCAGG
CACTAGCGCGAAAACTGTCGGCGATACCCAGCCAGGCGAAGGCGGTGTTCCCGCGTTTTACGCATGGACAGATAAAGTGC
CGTCAACGCCCGGACGGATGCTGCGCGCCGAGCCACTGACGCCCATTCAGAGCCTTGATAATGCTGGCCAGAATGTCCGT
ATTTTGTATACCTCCACCGATGGGCTCAACAACCAGCCAGTCGTAGTCTCCGGCGCACTGTTTACTCCCAAGGGCACGCC
GCCGAAGGGTGGATGGCCGTTGATGGCGTGGGCGCATGGCACGGTTGGTAGTGCGGATGTCTGCGCGCCTTCTTTTGCCG
GGCGCAGTGGTCGCGACACGCGCTATCTGAATGAATGGCTCGGGCGCGGTTACGCGATTGTGGCCACTGACTATGAGGGG
CTGGGGACGCCGGGGCTGCATCCGTTCGGGCTGAGCAGCCCGCTGGCTTACGGCGTTCTGGACAGCATTCGTGCAGTTCA
GAGGGCGGATTTCAATCTGTCTTCGCGGGTTGTTGTGTTTGGTCAGTCGCAGGGCGGTCGTGCGGCGTTTGCGACGGCTG
TCTACAAGAAGACTTACGCACCGGAGCTGAATATTGTCGGCGTGGTTGCGACCGGGACGCCGTATCCGATGGCTTCAGGG
CATGCCGGGCATATCGGGCAAGGCACGTCACGCGATCAGGTCACGCCATCCTTGGCTTACAACCTGCTGCGGCTGAGCAC
TGCCGGGCTGATCAACCCGTCGTTCGTGCCCACTGATTATCTGAGCGACCGTGCACAGCCTGCGTTTGGAGTCAGTCAGC
GTGATTGCCTGCATGCCATTGAGCGTGAGGTTGTTGCAGATGGGCTGACGTTCAACAACAGTTTCAGCCGCTCGCCGGAG
GCTGCGCTTGATCAGGTGAACCGCGAGTCGTCCTACCCGACGTTAACGTCGGACATCCCGATTTTTATAGGTACGGGCGG
CAAGGATGTCGTTTCACCGGTCCGCAGCCAGATCGCGCTGGTCAAGGATGCGTGCACCGCAGGCGACCGCATTGAGTGGC
ATTACTACCCGCAACTGGATCACTCCGGCGCAGTGAATGGCTCACTGCCGGACTCGACACGTTTTGTCGAGAAAGCATTT
TCGGGGGAGCTTATGACGGGGAATTGTGGGGAGACGAAGAGCGTCGCACGATAG

Upstream 100 bases:

>100_bases
ATGCACTGAACCTGCTGCACTCAGTGACGCGGGTACTTCAATCGGCTTACTATCGAAGACACTGATACGCCCTCTCCTGT
GAACGCGCGGAGAAATATTC

Downstream 100 bases:

>100_bases
TTGAGGTTGTCGTTCCTCACGCTCCAGCGCGGGAATGCCTTGGGTGACGCTCTGCGTCACAGATCTGCGCTGCGTCGCAC
ATTCACGATCGGACGCGGAG

Product: secretory lipase

Products: NA

Alternate protein names: Lipase; Triacylglycerol Lipase; Secreted Protein; Exported Lipase; Secretory Lipase Family Protein; Alkaline Lipase; Alpha/Beta Hydrolase; Acetyl Esterase; Signal Peptide; Lipase Family Protein; Secretory Lipase Family; Lipoprotein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MYSSPGSSTALVALLIALLTGCSGAPGTSAKTVGDTQPGEGGVPAFYAWTDKVPSTPGRMLRAEPLTPIQSLDNAGQNVR
ILYTSTDGLNNQPVVVSGALFTPKGTPPKGGWPLMAWAHGTVGSADVCAPSFAGRSGRDTRYLNEWLGRGYAIVATDYEG
LGTPGLHPFGLSSPLAYGVLDSIRAVQRADFNLSSRVVVFGQSQGGRAAFATAVYKKTYAPELNIVGVVATGTPYPMASG
HAGHIGQGTSRDQVTPSLAYNLLRLSTAGLINPSFVPTDYLSDRAQPAFGVSQRDCLHAIEREVVADGLTFNNSFSRSPE
AALDQVNRESSYPTLTSDIPIFIGTGGKDVVSPVRSQIALVKDACTAGDRIEWHYYPQLDHSGAVNGSLPDSTRFVEKAF
SGELMTGNCGETKSVAR

Sequences:

>Translated_417_residues
MYSSPGSSTALVALLIALLTGCSGAPGTSAKTVGDTQPGEGGVPAFYAWTDKVPSTPGRMLRAEPLTPIQSLDNAGQNVR
ILYTSTDGLNNQPVVVSGALFTPKGTPPKGGWPLMAWAHGTVGSADVCAPSFAGRSGRDTRYLNEWLGRGYAIVATDYEG
LGTPGLHPFGLSSPLAYGVLDSIRAVQRADFNLSSRVVVFGQSQGGRAAFATAVYKKTYAPELNIVGVVATGTPYPMASG
HAGHIGQGTSRDQVTPSLAYNLLRLSTAGLINPSFVPTDYLSDRAQPAFGVSQRDCLHAIEREVVADGLTFNNSFSRSPE
AALDQVNRESSYPTLTSDIPIFIGTGGKDVVSPVRSQIALVKDACTAGDRIEWHYYPQLDHSGAVNGSLPDSTRFVEKAF
SGELMTGNCGETKSVAR
>Mature_417_residues
MYSSPGSSTALVALLIALLTGCSGAPGTSAKTVGDTQPGEGGVPAFYAWTDKVPSTPGRMLRAEPLTPIQSLDNAGQNVR
ILYTSTDGLNNQPVVVSGALFTPKGTPPKGGWPLMAWAHGTVGSADVCAPSFAGRSGRDTRYLNEWLGRGYAIVATDYEG
LGTPGLHPFGLSSPLAYGVLDSIRAVQRADFNLSSRVVVFGQSQGGRAAFATAVYKKTYAPELNIVGVVATGTPYPMASG
HAGHIGQGTSRDQVTPSLAYNLLRLSTAGLINPSFVPTDYLSDRAQPAFGVSQRDCLHAIEREVVADGLTFNNSFSRSPE
AALDQVNRESSYPTLTSDIPIFIGTGGKDVVSPVRSQIALVKDACTAGDRIEWHYYPQLDHSGAVNGSLPDSTRFVEKAF
SGELMTGNCGETKSVAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43822; Mature: 43822

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSSPGSSTALVALLIALLTGCSGAPGTSAKTVGDTQPGEGGVPAFYAWTDKVPSTPGRM
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCE
LRAEPLTPIQSLDNAGQNVRILYTSTDGLNNQPVVVSGALFTPKGTPPKGGWPLMAWAHG
EECCCCCHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECC
TVGSADVCAPSFAGRSGRDTRYLNEWLGRGYAIVATDYEGLGTPGLHPFGLSSPLAYGVL
CCCCCHHCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
DSIRAVQRADFNLSSRVVVFGQSQGGRAAFATAVYKKTYAPELNIVGVVATGTPYPMASG
HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
HAGHIGQGTSRDQVTPSLAYNLLRLSTAGLINPSFVPTDYLSDRAQPAFGVSQRDCLHAI
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
EREVVADGLTFNNSFSRSPEAALDQVNRESSYPTLTSDIPIFIGTGGKDVVSPVRSQIAL
HHHHHHCCCEECCCCCCCHHHHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHH
VKDACTAGDRIEWHYYPQLDHSGAVNGSLPDSTRFVEKAFSGELMTGNCGETKSVAR
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHCCC
>Mature Secondary Structure
MYSSPGSSTALVALLIALLTGCSGAPGTSAKTVGDTQPGEGGVPAFYAWTDKVPSTPGRM
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCE
LRAEPLTPIQSLDNAGQNVRILYTSTDGLNNQPVVVSGALFTPKGTPPKGGWPLMAWAHG
EECCCCCHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECC
TVGSADVCAPSFAGRSGRDTRYLNEWLGRGYAIVATDYEGLGTPGLHPFGLSSPLAYGVL
CCCCCHHCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
DSIRAVQRADFNLSSRVVVFGQSQGGRAAFATAVYKKTYAPELNIVGVVATGTPYPMASG
HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
HAGHIGQGTSRDQVTPSLAYNLLRLSTAGLINPSFVPTDYLSDRAQPAFGVSQRDCLHAI
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHH
EREVVADGLTFNNSFSRSPEAALDQVNRESSYPTLTSDIPIFIGTGGKDVVSPVRSQIAL
HHHHHHCCCEECCCCCCCHHHHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHHHHHHH
VKDACTAGDRIEWHYYPQLDHSGAVNGSLPDSTRFVEKAFSGELMTGNCGETKSVAR
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA