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The map label for this gene is oruR [H]

Identifier: 66043593

GI number: 66043593

Start: 342094

End: 343086

Strand: Reverse

Name: oruR [H]

Synonym: Psyr_0324

Alternate gene names: 66043593

Gene position: 343086-342094 (Counterclockwise)

Preceding gene: 66043598

Following gene: 66043588

Centisome position: 5.63

GC content: 62.54

Gene sequence:

>993_bases
ATGCCCGAGCCAAGCAGTCTCGCCAGCTGGACCCCCGCGCTGCGCAAGCAGCTTACTGCCCTGGGTATGGACAGCGATGC
GTTGTGCCAGAGCGCGGGCATAGACCTGAATTTGCTCAGTGAACCCGGTGCGCAATTCTCGCCGGATGTCACCGCTGCGC
TTTGGCAACGGGCAGTGCAAGCCAGCCTTGATCCGGCGCTGGGTTTGCGTGTTTCACGCTTTGTCAGCCCGACAGCGTTT
CATGCGCTGGGCTATACGCTGGTCGCCAGCGGTTCGCTACGCGAAGTTTTCGAGCGCATCGTACGTTACCGCTCGATGGC
CGAGGACTCTCTGGAGCTGGACTTCAGGACAGTCGGCGAGCGTTATGAATTTCGCTTCGGCACGCCGCCCTCCTGTCAGT
CACCGGTGCATGAGCTGCTCGATGCATTTGCCGCCATTTACGTACGCACCTGCCGCAATCGGTTAGGCCGGGGCTATGCG
CCGCTTGCCGTGCACCTGCAGCGTCCGGCACCCGACGACCCGCGGCCCTGGCACGACCTGTTTCGCTCACCGGTCATGTT
TGCGGCGCAGGAGAACTTGCTGGAGTTTGACGGTGATCAATTCGACAGCCACCTGGATGACGGCCCGGTGCAGCTGAACG
GCCAGGAATCCCAAGGGGATCCGTTACCGTCACTGATCTGGGAGCAGCGCGTACGCTCGGCCATCGAAACCCTGCTACCG
GACGGCGAGCCCACCGTCAGAAGCATTGCCGAAGCCCTGCACCTGAGCCCGCGCAACCTGCAGCGCCATCTGGCCGACGA
GGGCTGCTGCTATGACCTGCTGCTCAACCAATGCCGCCAGAACCTGGCGCTGCTGCACATGAACGATCAACAAAGCTCGC
TGAGCGAAATCGCCTACCTGCTGGGTTTTTCCGACACCGACTGCCTGAGCCGCGCCTTCAAACGCTGGACCGGGCTGACA
CCGGAACAGTACCGCAGCAGCGTGGTGCGTTGA

Upstream 100 bases:

>100_bases
TCATTCTTGAAGGCGGCGTCAGGCAAGGGAGTTGTCCGGAGAGGCCCTGCCGGCACGGGCCTGATGCTGAAGTCACCTCA
TGTCAGGAAGAGGCGTGCGC

Downstream 100 bases:

>100_bases
GCGCTGATGGAGGACACACCATCGTGTCCGATGCTCAGCGTCCACTCTTGATCAAGCGGCGCAGCGCACATCCATGACGC
GGAGCGTCACGAAGGGCATT

Product: helix-turn-helix, AraC type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MPEPSSLASWTPALRKQLTALGMDSDALCQSAGIDLNLLSEPGAQFSPDVTAALWQRAVQASLDPALGLRVSRFVSPTAF
HALGYTLVASGSLREVFERIVRYRSMAEDSLELDFRTVGERYEFRFGTPPSCQSPVHELLDAFAAIYVRTCRNRLGRGYA
PLAVHLQRPAPDDPRPWHDLFRSPVMFAAQENLLEFDGDQFDSHLDDGPVQLNGQESQGDPLPSLIWEQRVRSAIETLLP
DGEPTVRSIAEALHLSPRNLQRHLADEGCCYDLLLNQCRQNLALLHMNDQQSSLSEIAYLLGFSDTDCLSRAFKRWTGLT
PEQYRSSVVR

Sequences:

>Translated_330_residues
MPEPSSLASWTPALRKQLTALGMDSDALCQSAGIDLNLLSEPGAQFSPDVTAALWQRAVQASLDPALGLRVSRFVSPTAF
HALGYTLVASGSLREVFERIVRYRSMAEDSLELDFRTVGERYEFRFGTPPSCQSPVHELLDAFAAIYVRTCRNRLGRGYA
PLAVHLQRPAPDDPRPWHDLFRSPVMFAAQENLLEFDGDQFDSHLDDGPVQLNGQESQGDPLPSLIWEQRVRSAIETLLP
DGEPTVRSIAEALHLSPRNLQRHLADEGCCYDLLLNQCRQNLALLHMNDQQSSLSEIAYLLGFSDTDCLSRAFKRWTGLT
PEQYRSSVVR
>Mature_329_residues
PEPSSLASWTPALRKQLTALGMDSDALCQSAGIDLNLLSEPGAQFSPDVTAALWQRAVQASLDPALGLRVSRFVSPTAFH
ALGYTLVASGSLREVFERIVRYRSMAEDSLELDFRTVGERYEFRFGTPPSCQSPVHELLDAFAAIYVRTCRNRLGRGYAP
LAVHLQRPAPDDPRPWHDLFRSPVMFAAQENLLEFDGDQFDSHLDDGPVQLNGQESQGDPLPSLIWEQRVRSAIETLLPD
GEPTVRSIAEALHLSPRNLQRHLADEGCCYDLLLNQCRQNLALLHMNDQQSSLSEIAYLLGFSDTDCLSRAFKRWTGLTP
EQYRSSVVR

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36870; Mature: 36739

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPSSLASWTPALRKQLTALGMDSDALCQSAGIDLNLLSEPGAQFSPDVTAALWQRAVQ
CCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHH
ASLDPALGLRVSRFVSPTAFHALGYTLVASGSLREVFERIVRYRSMAEDSLELDFRTVGE
HHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYEFRFGTPPSCQSPVHELLDAFAAIYVRTCRNRLGRGYAPLAVHLQRPAPDDPRPWHDL
HHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHH
FRSPVMFAAQENLLEFDGDQFDSHLDDGPVQLNGQESQGDPLPSLIWEQRVRSAIETLLP
HCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
DGEPTVRSIAEALHLSPRNLQRHLADEGCCYDLLLNQCRQNLALLHMNDQQSSLSEIAYL
CCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH
LGFSDTDCLSRAFKRWTGLTPEQYRSSVVR
HCCCCHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
PEPSSLASWTPALRKQLTALGMDSDALCQSAGIDLNLLSEPGAQFSPDVTAALWQRAVQ
CCCCCHHHCCHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHH
ASLDPALGLRVSRFVSPTAFHALGYTLVASGSLREVFERIVRYRSMAEDSLELDFRTVGE
HHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYEFRFGTPPSCQSPVHELLDAFAAIYVRTCRNRLGRGYAPLAVHLQRPAPDDPRPWHDL
HHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHH
FRSPVMFAAQENLLEFDGDQFDSHLDDGPVQLNGQESQGDPLPSLIWEQRVRSAIETLLP
HCCHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
DGEPTVRSIAEALHLSPRNLQRHLADEGCCYDLLLNQCRQNLALLHMNDQQSSLSEIAYL
CCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH
LGFSDTDCLSRAFKRWTGLTPEQYRSSVVR
HCCCCHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]