| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ordL [H]
Identifier: 66043428
GI number: 66043428
Start: 172214
End: 173509
Strand: Reverse
Name: ordL [H]
Synonym: Psyr_0158
Alternate gene names: 66043428
Gene position: 173509-172214 (Counterclockwise)
Preceding gene: 66043429
Following gene: 66043427
Centisome position: 2.85
GC content: 62.58
Gene sequence:
>1296_bases ATGAGTGACAAGGGGAACGAGATGCGCAGTGAGTCTTACTGGCTCGATACGGCTCCAGGCTTTACCGGCGCACAGGACGG CGCAGTGGAGGGTCAGGCTGACGTGGTAGTGGTCGGTGGCGGTTTCACCGGCCTTGCGGCGGCGCGTGCATTGGCCTTGA AAGGTGCCAGCGTGGTGGTTCTGGAAGCGGGCCGGGTGATCGGCGAAGCGTCGGGCCGCAATGGCGGACAGTGCAATACC GGCGTGGCTCAGGACTATGCGTCGTTGAGCGCAACCCTGGGTGCCGATCAGGCACGCGAGTATTACAAGGCTTACGAAAG TGCGGTGCAAAGCGTCGTGAGCGTGATCGACGAGGAACACATCGCCTGCGACATCAAGCGTAACGGCAAGCTCAAGCTGG CGGCCAAGCCAGGGCATTACGAAGGACTGGCGCGCACCTGCGAGCTGATCCGCCGTGAAGTCGATGCTGACGTCGAGCTG CTGTCCGCTCAGGACCTGCGCGCTGAAATCGATTCGAACGAGTTTCACGGTGGCCTGCTGCAGCGCAACGGCGTACAGAT GCATGTCGGACGTTTCGGTGTGGGTCTCGCCGACGCAGCAGTGCGTCATGGCGCAAGGGTGTATCAGAACGCGACGGTAA AGGACTGGAAAGCCAACCGTGGCGGCTTTGTGGTCAACACCTCGAAAGGCTCGATCCAGGCCGGCCAGCTGCTGTTGGCG ACCGGAGCCTGCCAGCATGGCGGGCTGGGCTGGTATCGCCGGCGCATCGTGCCGGTCGGCAGCTTCGTCATCGTCACTGA AGTGTTGCCGCAAGCGCTGATCGACCAACTGTTCCCCCACCAGCGCGCTTACGTGACCAGCCGTTTGATCGGCAACTATT TCCGCCTCACGCCGGACAACCGTCTGCTGTTCGGCGGGCGCGCGCGCTTCGCCATGTCCAACAGCAGCTCCGACGCCAAG AGCGGCAAGGTGTTGCAGGCGGCCATGGTGCAGATGTTTCCGCAACTGGCACACGTCAAGGTCGACTACTGCTGGGGCGG GCTGGTGGACATGACCTCCGACCGTCTGCCGCGTGCAGGCGAACACAACGGGGTCTTCTACTCGATGGGTTACAGCGGCC ACGGTGTACAGATGTCGGTGCACATGGGGCGGATGATGGCCGAAGTCATGGAAGGCAAGGCACAGGCCAATCCCTGGAAG GACCTGAGCTGGCCAGCCATTCCCGGCCATTTCGGCAAGCCATGGTTTCTGCCGCTGGTAGGCGCGTATTACCGCTATCA GGACAGCCGCCACTGA
Upstream 100 bases:
>100_bases CGAATACCACCAGATTCCCGATATCGGCGGACTGGCCGGGCTGGTCGGCCTGTAAACCAGGCAACCCGCGTGATACCGGC ATTTTTCAAGGTGCTCTTCG
Downstream 100 bases:
>100_bases GTGTTTGTCTGACCGTCGTCGTGTGTGCTTGAAGGACGCTCCGGCCAACCGTGAGCAATTCGGAATTTCCCCTTTTCGAC AGGTAGAACTGATATGACTG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSDKGNEMRSESYWLDTAPGFTGAQDGAVEGQADVVVVGGGFTGLAAARALALKGASVVVLEAGRVIGEASGRNGGQCNT GVAQDYASLSATLGADQAREYYKAYESAVQSVVSVIDEEHIACDIKRNGKLKLAAKPGHYEGLARTCELIRREVDADVEL LSAQDLRAEIDSNEFHGGLLQRNGVQMHVGRFGVGLADAAVRHGARVYQNATVKDWKANRGGFVVNTSKGSIQAGQLLLA TGACQHGGLGWYRRRIVPVGSFVIVTEVLPQALIDQLFPHQRAYVTSRLIGNYFRLTPDNRLLFGGRARFAMSNSSSDAK SGKVLQAAMVQMFPQLAHVKVDYCWGGLVDMTSDRLPRAGEHNGVFYSMGYSGHGVQMSVHMGRMMAEVMEGKAQANPWK DLSWPAIPGHFGKPWFLPLVGAYYRYQDSRH
Sequences:
>Translated_431_residues MSDKGNEMRSESYWLDTAPGFTGAQDGAVEGQADVVVVGGGFTGLAAARALALKGASVVVLEAGRVIGEASGRNGGQCNT GVAQDYASLSATLGADQAREYYKAYESAVQSVVSVIDEEHIACDIKRNGKLKLAAKPGHYEGLARTCELIRREVDADVEL LSAQDLRAEIDSNEFHGGLLQRNGVQMHVGRFGVGLADAAVRHGARVYQNATVKDWKANRGGFVVNTSKGSIQAGQLLLA TGACQHGGLGWYRRRIVPVGSFVIVTEVLPQALIDQLFPHQRAYVTSRLIGNYFRLTPDNRLLFGGRARFAMSNSSSDAK SGKVLQAAMVQMFPQLAHVKVDYCWGGLVDMTSDRLPRAGEHNGVFYSMGYSGHGVQMSVHMGRMMAEVMEGKAQANPWK DLSWPAIPGHFGKPWFLPLVGAYYRYQDSRH >Mature_430_residues SDKGNEMRSESYWLDTAPGFTGAQDGAVEGQADVVVVGGGFTGLAAARALALKGASVVVLEAGRVIGEASGRNGGQCNTG VAQDYASLSATLGADQAREYYKAYESAVQSVVSVIDEEHIACDIKRNGKLKLAAKPGHYEGLARTCELIRREVDADVELL SAQDLRAEIDSNEFHGGLLQRNGVQMHVGRFGVGLADAAVRHGARVYQNATVKDWKANRGGFVVNTSKGSIQAGQLLLAT GACQHGGLGWYRRRIVPVGSFVIVTEVLPQALIDQLFPHQRAYVTSRLIGNYFRLTPDNRLLFGGRARFAMSNSSSDAKS GKVLQAAMVQMFPQLAHVKVDYCWGGLVDMTSDRLPRAGEHNGVFYSMGYSGHGVQMSVHMGRMMAEVMEGKAQANPWKD LSWPAIPGHFGKPWFLPLVGAYYRYQDSRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=402, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46640; Mature: 46509
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKGNEMRSESYWLDTAPGFTGAQDGAVEGQADVVVVGGGFTGLAAARALALKGASVVV CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEE LEAGRVIGEASGRNGGQCNTGVAQDYASLSATLGADQAREYYKAYESAVQSVVSVIDEEH EECCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC IACDIKRNGKLKLAAKPGHYEGLARTCELIRREVDADVELLSAQDLRAEIDSNEFHGGLL EEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCE QRNGVQMHVGRFGVGLADAAVRHGARVYQNATVKDWKANRGGFVVNTSKGSIQAGQLLLA ECCCCEEEECCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE TGACQHGGLGWYRRRIVPVGSFVIVTEVLPQALIDQLFPHQRAYVTSRLIGNYFRLTPDN ECCCCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCC RLLFGGRARFAMSNSSSDAKSGKVLQAAMVQMFPQLAHVKVDYCWGGLVDMTSDRLPRAG EEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCC EHNGVFYSMGYSGHGVQMSVHMGRMMAEVMEGKAQANPWKDLSWPAIPGHFGKPWFLPLV CCCCEEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH GAYYRYQDSRH HHHHHHCCCCC >Mature Secondary Structure SDKGNEMRSESYWLDTAPGFTGAQDGAVEGQADVVVVGGGFTGLAAARALALKGASVVV CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEE LEAGRVIGEASGRNGGQCNTGVAQDYASLSATLGADQAREYYKAYESAVQSVVSVIDEEH EECCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC IACDIKRNGKLKLAAKPGHYEGLARTCELIRREVDADVELLSAQDLRAEIDSNEFHGGLL EEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCE QRNGVQMHVGRFGVGLADAAVRHGARVYQNATVKDWKANRGGFVVNTSKGSIQAGQLLLA ECCCCEEEECCCCCCHHHHHHHHCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEE TGACQHGGLGWYRRRIVPVGSFVIVTEVLPQALIDQLFPHQRAYVTSRLIGNYFRLTPDN ECCCCCCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCC RLLFGGRARFAMSNSSSDAKSGKVLQAAMVQMFPQLAHVKVDYCWGGLVDMTSDRLPRAG EEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCC EHNGVFYSMGYSGHGVQMSVHMGRMMAEVMEGKAQANPWKDLSWPAIPGHFGKPWFLPLV CCCCEEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH GAYYRYQDSRH HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]