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The map label for this gene is ooxB [H]

Identifier: 66043421

GI number: 66043421

Start: 163915

End: 165084

Strand: Reverse

Name: ooxB [H]

Synonym: Psyr_0151

Alternate gene names: 66043421

Gene position: 165084-163915 (Counterclockwise)

Preceding gene: 66043422

Following gene: 66043420

Centisome position: 2.71

GC content: 62.74

Gene sequence:

>1170_bases
ATGAAGCAGCCAAAAGTGGACGTACTAATTGTCGGCGGCGGCTTCATGGGCTCGGCATCAGCGTTCTTTCTGCGCCAGCG
CGGCAAGTCAGTGACGCTGCTGGAGCGCGACGTGATCGGCCAGTACGCCAGCGGCGTGAACTTCGGCAACGTGCGCCGTC
AGGGTCGGCATCTCGGTCAGCTGGAACTCGCCAACCGCTCCAGAGCCCTTTGGCAGCGGCTGCCGGAGCTGATCGGTGAA
GACCTGGAGTTCCTGCCCAGCGGCCACATGCGCGTCTGCTATCGCGAGGACGAAATCGCCGAACTGGAAGCCTATGCAGC
GGCACCGGAAGCCCGTGAGCTGGACCTGAAAATCTATAGCGGGAAAGCGCTGCACGAGCGCTTTCCGTTTCTCGGGCCGG
ACGTGAAGGGCGGCTCTTACGCGCCACACGATGGCCACGCCAACCCGCGCCTGGCAGCACCTGCCTTTGCCCGCGCAGCG
ATTCGGGCCGGGGCGCGGATCGAAGAGCGTACCGAAGTGGCTCATGTTGAAAAGGTCGGTAACGAATTCGAAGTCACCAC
CACTGACGGGCGCATTTTCAGCGCCGATCAGTTGCTGATTACCGCTGGCGCCTGGGGACAGAAACTCTCCACGCAGTTTG
GCGAATCCGTGCCGCTGGACACCCATGGTCCGCAGATGGCCGTCACCGAGCCGGTGCCGTATGCACTGCCGACAGTCATC
GGCGTGTTCACCAAAATCCCTCACGAAGTGATCTACTTCCGGCAGATCGCCCGCGGCAACATCGTCATCGGCGGTGGTTT
TCGCAGCAAGCCGGACATGATCAACCGCCGCGCCTACGTCGAACCGCGCAGCATCATCAACCAGGTGCAGCAGATGCGTC
GCCTGTTGCCCGGCGTCGGCAACCTGAACATCATCCGCGTGTGGAGCGGCATCGAAGGCTACACGCCGGACTCGCTGCCG
GTGATGGGCCGCAGCGGCAAGGTCGACGGCCTGTTCTATGCGTTCGGCTTCTGCGGTCACGGCTTCCAGCTCGGCCCGGG
CGTGGGCGACGTGATGGCCGAACTGATCAGCACCGGCACCACCAGCACCTCGATCAGCCCGTTCGACATTCGCCGGTTTG
ATGTCAGCCTTGTGGACAACCTCACTGAACAGACGAGTAAAGCCTCATGA

Upstream 100 bases:

>100_bases
TGATCGCTGCCGAAGCCGGTGTGCCGGTCGAACAGGTTGGTCGTCAGCGCGGTCAGGCACCGGTCAAACCGTTGTCGATG
CTGATCGACGAGGTGGCATC

Downstream 100 bases:

>100_bases
GCCCCCGCGCACTGGAAATCCTCAAGCGTCTGATCGCCTTCGACACCGTTTCGTCGGAGCCGAACATGGCGCTGATCGAA
TACGTCCGCGAACTGCTGGC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Octopine oxidase subunit B [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKQPKVDVLIVGGGFMGSASAFFLRQRGKSVTLLERDVIGQYASGVNFGNVRRQGRHLGQLELANRSRALWQRLPELIGE
DLEFLPSGHMRVCYREDEIAELEAYAAAPEARELDLKIYSGKALHERFPFLGPDVKGGSYAPHDGHANPRLAAPAFARAA
IRAGARIEERTEVAHVEKVGNEFEVTTTDGRIFSADQLLITAGAWGQKLSTQFGESVPLDTHGPQMAVTEPVPYALPTVI
GVFTKIPHEVIYFRQIARGNIVIGGGFRSKPDMINRRAYVEPRSIINQVQQMRRLLPGVGNLNIIRVWSGIEGYTPDSLP
VMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGTTSTSISPFDIRRFDVSLVDNLTEQTSKAS

Sequences:

>Translated_389_residues
MKQPKVDVLIVGGGFMGSASAFFLRQRGKSVTLLERDVIGQYASGVNFGNVRRQGRHLGQLELANRSRALWQRLPELIGE
DLEFLPSGHMRVCYREDEIAELEAYAAAPEARELDLKIYSGKALHERFPFLGPDVKGGSYAPHDGHANPRLAAPAFARAA
IRAGARIEERTEVAHVEKVGNEFEVTTTDGRIFSADQLLITAGAWGQKLSTQFGESVPLDTHGPQMAVTEPVPYALPTVI
GVFTKIPHEVIYFRQIARGNIVIGGGFRSKPDMINRRAYVEPRSIINQVQQMRRLLPGVGNLNIIRVWSGIEGYTPDSLP
VMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGTTSTSISPFDIRRFDVSLVDNLTEQTSKAS
>Mature_389_residues
MKQPKVDVLIVGGGFMGSASAFFLRQRGKSVTLLERDVIGQYASGVNFGNVRRQGRHLGQLELANRSRALWQRLPELIGE
DLEFLPSGHMRVCYREDEIAELEAYAAAPEARELDLKIYSGKALHERFPFLGPDVKGGSYAPHDGHANPRLAAPAFARAA
IRAGARIEERTEVAHVEKVGNEFEVTTTDGRIFSADQLLITAGAWGQKLSTQFGESVPLDTHGPQMAVTEPVPYALPTVI
GVFTKIPHEVIYFRQIARGNIVIGGGFRSKPDMINRRAYVEPRSIINQVQQMRRLLPGVGNLNIIRVWSGIEGYTPDSLP
VMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGTTSTSISPFDIRRFDVSLVDNLTEQTSKAS

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI197927446, Length=393, Percent_Identity=24.1730279898219, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI21361378, Length=393, Percent_Identity=24.1730279898219, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI194306651, Length=390, Percent_Identity=25.8974358974359, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI24797151, Length=407, Percent_Identity=23.3415233415233, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71994045, Length=394, Percent_Identity=22.5888324873096, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71994052, Length=401, Percent_Identity=22.4438902743142, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI20130091, Length=385, Percent_Identity=26.2337662337662, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42581; Mature: 42581

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPKVDVLIVGGGFMGSASAFFLRQRGKSVTLLERDVIGQYASGVNFGNVRRQGRHLGQ
CCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHCCCCCC
LELANRSRALWQRLPELIGEDLEFLPSGHMRVCYREDEIAELEAYAAAPEARELDLKIYS
EEHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEEEC
GKALHERFPFLGPDVKGGSYAPHDGHANPRLAAPAFARAAIRAGARIEERTEVAHVEKVG
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
NEFEVTTTDGRIFSADQLLITAGAWGQKLSTQFGESVPLDTHGPQMAVTEPVPYALPTVI
CEEEEEECCCEEEECCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHH
GVFTKIPHEVIYFRQIARGNIVIGGGFRSKPDMINRRAYVEPRSIINQVQQMRRLLPGVG
HHHHHCHHHHHHHHHHHCCCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
NLNIIRVWSGIEGYTPDSLPVMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGT
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
TSTSISPFDIRRFDVSLVDNLTEQTSKAS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQPKVDVLIVGGGFMGSASAFFLRQRGKSVTLLERDVIGQYASGVNFGNVRRQGRHLGQ
CCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHCCCCCC
LELANRSRALWQRLPELIGEDLEFLPSGHMRVCYREDEIAELEAYAAAPEARELDLKIYS
EEHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEEEC
GKALHERFPFLGPDVKGGSYAPHDGHANPRLAAPAFARAAIRAGARIEERTEVAHVEKVG
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
NEFEVTTTDGRIFSADQLLITAGAWGQKLSTQFGESVPLDTHGPQMAVTEPVPYALPTVI
CEEEEEECCCEEEECCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHH
GVFTKIPHEVIYFRQIARGNIVIGGGFRSKPDMINRRAYVEPRSIINQVQQMRRLLPGVG
HHHHHCHHHHHHHHHHHCCCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
NLNIIRVWSGIEGYTPDSLPVMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGT
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
TSTSISPFDIRRFDVSLVDNLTEQTSKAS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]