| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is xpt [H]
Identifier: 66043347
GI number: 66043347
Start: 81563
End: 82132
Strand: Direct
Name: xpt [H]
Synonym: Psyr_0076
Alternate gene names: 66043347
Gene position: 81563-82132 (Clockwise)
Preceding gene: 66043346
Following gene: 66043349
Centisome position: 1.34
GC content: 59.82
Gene sequence:
>570_bases GTGGAAGCACTGCACAAGAAAATTCGCGAAGAAGGCATCGTATTGTCCGATCAGGTGCTGAAGGTCGATGCGTTTCTCAA CCATCAGATCGATCCGGCGCTGATGAAGGAAATCGGCGATGAATTTGCCCGACTGTTTGCCGACGCTGGCGTGACCAAGA TCGTGACCATTGAGGCTTCCGGCATCGCGCCGGCAGTCATGGCGGGTTTGAACATGGGCGTGCCGGTGATCTTCGCCCGC AAGCACCAGTCCCTGACCCTGACCGAAAACCTGCTGACGGCGAGTGTGTACTCATTCACCAAGCAGGTGGAAAGCACCGT GGCAATCTCGCCGCGCCACCTGAGCAGCGACGACAACGTGCTGATCATCGATGACTTCCTGGCCAACGGCAAAGCCTCAC AGGCGCTGATCTCGATCATCAAACAGGCCGGCGCCACGGTGGCCGGACTGGGCATCGTGATCGAGAAATCCTTCCAGGGC GGCCGCGCCGAACTGGACGCCCAGGGCTATCGCGTCGAATCCCTGGCGCGGGTCGAATCCCTGGCCGGCGGGGTTGTGAC GTTCAAGTAA
Upstream 100 bases:
>100_bases TCGCGGCAACACTGCGCTTGCCGACATTCGCGCCATGCTGAAACGCTAGCCGACACCCTATTGATCATTTATTGCGCAAT GGCGCAGCCAAGGAATTTAA
Downstream 100 bases:
>100_bases GGCTCCCGAGGGCGGACGCAGAGCGTCCAGAAAGGCATGCGACGCGGAGCGCCGCACGATAGTTGTGATGATCGTCCCGC GCGCTCCAGCGTGGGAATGC
Product: xanthine phosphoribosyltransferase
Products: NA
Alternate protein names: XPRTase [H]
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MEALHKKIREEGIVLSDQVLKVDAFLNHQIDPALMKEIGDEFARLFADAGVTKIVTIEASGIAPAVMAGLNMGVPVIFAR KHQSLTLTENLLTASVYSFTKQVESTVAISPRHLSSDDNVLIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQG GRAELDAQGYRVESLARVESLAGGVVTFK
Sequences:
>Translated_189_residues MEALHKKIREEGIVLSDQVLKVDAFLNHQIDPALMKEIGDEFARLFADAGVTKIVTIEASGIAPAVMAGLNMGVPVIFAR KHQSLTLTENLLTASVYSFTKQVESTVAISPRHLSSDDNVLIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQG GRAELDAQGYRVESLARVESLAGGVVTFK >Mature_189_residues MEALHKKIREEGIVLSDQVLKVDAFLNHQIDPALMKEIGDEFARLFADAGVTKIVTIEASGIAPAVMAGLNMGVPVIFAR KHQSLTLTENLLTASVYSFTKQVESTVAISPRHLSSDDNVLIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQG GRAELDAQGYRVESLARVESLAGGVVTFK
Specific function: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XPT subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR010079 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 20148; Mature: 20148
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALHKKIREEGIVLSDQVLKVDAFLNHQIDPALMKEIGDEFARLFADAGVTKIVTIEAS CHHHHHHHHHCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC GIAPAVMAGLNMGVPVIFARKHQSLTLTENLLTASVYSFTKQVESTVAISPRHLSSDDNV CCCHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCE LIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQGGRAELDAQGYRVESLARVES EEEECCCCCCCHHHHHHHHHHHHCCCEEEHEEEEEECCCCCCEEECCCCCHHHHHHHHHH LAGGVVTFK HCCCEEEEC >Mature Secondary Structure MEALHKKIREEGIVLSDQVLKVDAFLNHQIDPALMKEIGDEFARLFADAGVTKIVTIEAS CHHHHHHHHHCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC GIAPAVMAGLNMGVPVIFARKHQSLTLTENLLTASVYSFTKQVESTVAISPRHLSSDDNV CCCHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCE LIIDDFLANGKASQALISIIKQAGATVAGLGIVIEKSFQGGRAELDAQGYRVESLARVES EEEECCCCCCCHHHHHHHHHHHHCCCEEEHEEEEEECCCCCCEEECCCCCHHHHHHHHHH LAGGVVTFK HCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA