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The map label for this gene is trg [C]

Identifier: 66043342

GI number: 66043342

Start: 72996

End: 74972

Strand: Reverse

Name: trg [C]

Synonym: Psyr_0071

Alternate gene names: 66043342

Gene position: 74972-72996 (Counterclockwise)

Preceding gene: 66043343

Following gene: 66043340

Centisome position: 1.23

GC content: 62.27

Gene sequence:

>1977_bases
ATGTCCAAGCCTCGTACCCGAATTGCTTCGCAACTTGGTATTGCTCTGGCCGTGATCCTGGCGGTGGTTATCAGTGGTAG
TACCCTGTTCGCGTTGAGGTCTCTGGACGCGTCCAACCTGGTCATTCGTGAAGAGCACATGTCGAGTGAAGCCAGGCTCC
TCGCTGACCAGCTCAACACTTTCCACAGCACGCTGCGCGACAGCACTCAGCGCCTGAGTGGCCTGTTCGAAAAACGCTTC
GCCGCTGGCCTTAGCCTGCAAGCCGACAAGCCGGTCACGGTGGCGGGCACATCCACGCCAGGCCTGTTCCTGCGTGATGC
CGCGCTGAACAACGACTTCACCGAAGTCGATGAATTCCGCTCGATGACCGCCGGCGTCGCGACCATTTTCGTGCGCAGCG
GCGACGACTTCATCCGTATCAGCACCTCCCTGAGCAAGCAGGATGGCACGCGCGCCATCGGCACCGTGCTGGACCGCAAG
GGCGCAGCCTACGAGCGTTTGATCGCCGGGCAGAGCTATGTCGGCAAAGCGGTATTGTTCGATCGCTATTACATGACCCA
GTACAGCCCGGTCCGCGACAGCAGCGGCAAGATCATTGCGGCGCTGTTCGTAGGGTTCGATTACACCGATGCGCAGAAGA
CCCAGTTCGATAACCTCAAGAGCTTCCGCATCGGCTCTACCGGCTCGCTGGCGCTGCTCGACGACAAGGGCACCTGGCTG
GTTCCACCGGCGGGCGTCAAATCCCTGGAAGGTGCCGCCAAGTCCGTTGCCGAGCTTGCCAGCAAACCAGGCAAGGCGCA
GTTCTGGGATGACGGGGATGACAACTATTACAGCGTCGGCCAGCCGTTCGCCGGCGGCCCCTGGACCGTCATCGCCAGCA
TGCCGCGCAAGGAAATCAGCGAAGTGACCTGGCACGTCGGCACGCAACTGGCGATCGGCAGTCTGCTGGCCATGCTCATC
GCCGTGATCAGCGCCATCTGGCTGCTGCGCAGCAAGCTGCGCCCATTGTCTGAACTGGTACGCCAGGCCGACGCACTGGG
TGCGGGCGACCTGAGCGTACGCCTGAATGTGACCAGCAACGACGAGATCGGGCAGCTGTCCGGCAGCTTCAACAAGATGA
GCGAAGCACTGTCATCGATGGTGTCGCATATCCGTACCGCGGCGCAGGAAGTCAGCACCCGCGCCAACGTGCTGTCCGGC
CTGTCGGGCGGTGCGTTCGAGGGCATGGAACAGCAATCCGGCGAGATCACCAGCATGGCCGGTGCCGTCGAAGAGTTCAG
CGCCACGTCGATGAACATCGCCGACAACATGGGCAATACCGAACGCCTGGCCCAGGAAAATGCCCAGCAGACACGCATCG
GTCGCACCTCGATGGAAGAGGCGTCTTCGTCGCTGCAACAGATCGCCACTTCGCTGAGCAGCACCGCCAAAGTCATCGAC
ACGCTGGGCCAGCGCTCGCAGGAAATCGGCAGCATCGTCGGGGTAATCACCTCGATTGCCGACCAGACCAACCTGCTCGC
GCTCAACGCTGCCATCGAGGCCGCGCGCGCCGGCGAACAAGGTCGCGGCTTTGCCGTGGTGGCTGACGAAGTCCGCAGCC
TGGCCTCGCGCACCCGTGAAGCCACCGATGAGATTTCCGGCATGATCGCCAGCATCCAGCAGGAAACCGGCAACGCCATC
AGCACCATGCAGCAGGGCAATACACTGATGCAGGAAGGCCTGTCGCTCAACGCCAAAGTGGCCTCCGCGCTGGCCCAGAT
CGACGAGCAAAGTCGCTCGGCCGGTCACCAGTTCGCCGCCATCACCACCGCCACCCAGGAACAAAGCAGCACTGCGACCA
TGCTCAGCAGCAACCTGCAAAGCATCGCCATGGCCAACAGTGAACAGCGCCAGGTCATGTCCAACCTGGCCATCACCGCC
CAGGAGCTGAATGGCCTGGCGACAGAACTGCGTCACGAGGTTGACCGGTTCCGTTGA

Upstream 100 bases:

>100_bases
AAGATTGCTCGTTCAAATAGCGTAAAAACACCAACTAAATCTATCAGCTGAATGGTAAGCCACGGACCCGGCGACTCCAA
TCATTCGGCACGGAGTCTCT

Downstream 100 bases:

>100_bases
TGGCTGCTGAAGGGCGCACGATTATCGCGCCGACGCTCTGCGTCGGAGAGCGATAGCGGCTCTCAAGAACACCATCGTAC
CCATGCTCCGCGTGGGTATG

Product: histidine kinase, HAMP region: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 657

Protein sequence:

>658_residues
MSKPRTRIASQLGIALAVILAVVISGSTLFALRSLDASNLVIREEHMSSEARLLADQLNTFHSTLRDSTQRLSGLFEKRF
AAGLSLQADKPVTVAGTSTPGLFLRDAALNNDFTEVDEFRSMTAGVATIFVRSGDDFIRISTSLSKQDGTRAIGTVLDRK
GAAYERLIAGQSYVGKAVLFDRYYMTQYSPVRDSSGKIIAALFVGFDYTDAQKTQFDNLKSFRIGSTGSLALLDDKGTWL
VPPAGVKSLEGAAKSVAELASKPGKAQFWDDGDDNYYSVGQPFAGGPWTVIASMPRKEISEVTWHVGTQLAIGSLLAMLI
AVISAIWLLRSKLRPLSELVRQADALGAGDLSVRLNVTSNDEIGQLSGSFNKMSEALSSMVSHIRTAAQEVSTRANVLSG
LSGGAFEGMEQQSGEITSMAGAVEEFSATSMNIADNMGNTERLAQENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVID
TLGQRSQEIGSIVGVITSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTREATDEISGMIASIQQETGNAI
STMQQGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAAITTATQEQSSTATMLSSNLQSIAMANSEQRQVMSNLAITA
QELNGLATELRHEVDRFR

Sequences:

>Translated_658_residues
MSKPRTRIASQLGIALAVILAVVISGSTLFALRSLDASNLVIREEHMSSEARLLADQLNTFHSTLRDSTQRLSGLFEKRF
AAGLSLQADKPVTVAGTSTPGLFLRDAALNNDFTEVDEFRSMTAGVATIFVRSGDDFIRISTSLSKQDGTRAIGTVLDRK
GAAYERLIAGQSYVGKAVLFDRYYMTQYSPVRDSSGKIIAALFVGFDYTDAQKTQFDNLKSFRIGSTGSLALLDDKGTWL
VPPAGVKSLEGAAKSVAELASKPGKAQFWDDGDDNYYSVGQPFAGGPWTVIASMPRKEISEVTWHVGTQLAIGSLLAMLI
AVISAIWLLRSKLRPLSELVRQADALGAGDLSVRLNVTSNDEIGQLSGSFNKMSEALSSMVSHIRTAAQEVSTRANVLSG
LSGGAFEGMEQQSGEITSMAGAVEEFSATSMNIADNMGNTERLAQENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVID
TLGQRSQEIGSIVGVITSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTREATDEISGMIASIQQETGNAI
STMQQGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAAITTATQEQSSTATMLSSNLQSIAMANSEQRQVMSNLAITA
QELNGLATELRHEVDRFR
>Mature_657_residues
SKPRTRIASQLGIALAVILAVVISGSTLFALRSLDASNLVIREEHMSSEARLLADQLNTFHSTLRDSTQRLSGLFEKRFA
AGLSLQADKPVTVAGTSTPGLFLRDAALNNDFTEVDEFRSMTAGVATIFVRSGDDFIRISTSLSKQDGTRAIGTVLDRKG
AAYERLIAGQSYVGKAVLFDRYYMTQYSPVRDSSGKIIAALFVGFDYTDAQKTQFDNLKSFRIGSTGSLALLDDKGTWLV
PPAGVKSLEGAAKSVAELASKPGKAQFWDDGDDNYYSVGQPFAGGPWTVIASMPRKEISEVTWHVGTQLAIGSLLAMLIA
VISAIWLLRSKLRPLSELVRQADALGAGDLSVRLNVTSNDEIGQLSGSFNKMSEALSSMVSHIRTAAQEVSTRANVLSGL
SGGAFEGMEQQSGEITSMAGAVEEFSATSMNIADNMGNTERLAQENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVIDT
LGQRSQEIGSIVGVITSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTREATDEISGMIASIQQETGNAIS
TMQQGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAAITTATQEQSSTATMLSSNLQSIAMANSEQRQVMSNLAITAQ
ELNGLATELRHEVDRFR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=362, Percent_Identity=30.3867403314917, Blast_Score=137, Evalue=3e-33,
Organism=Escherichia coli, GI1788194, Length=292, Percent_Identity=33.2191780821918, Blast_Score=136, Evalue=5e-33,
Organism=Escherichia coli, GI2367378, Length=291, Percent_Identity=31.6151202749141, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI1788195, Length=274, Percent_Identity=32.1167883211679, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1789453, Length=313, Percent_Identity=27.7955271565495, Blast_Score=106, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 70202; Mature: 70071

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPRTRIASQLGIALAVILAVVISGSTLFALRSLDASNLVIREEHMSSEARLLADQLNT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCEEEHHHCCHHHHHHHHHHHH
FHSTLRDSTQRLSGLFEKRFAAGLSLQADKPVTVAGTSTPGLFLRDAALNNDFTEVDEFR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEHHHCCCCHHHHHHHH
SMTAGVATIFVRSGDDFIRISTSLSKQDGTRAIGTVLDRKGAAYERLIAGQSYVGKAVLF
HHHHHHHEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH
DRYYMTQYSPVRDSSGKIIAALFVGFDYTDAQKTQFDNLKSFRIGSTGSLALLDDKGTWL
HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCHHEECCCCCCEEEEECCCCEE
VPPAGVKSLEGAAKSVAELASKPGKAQFWDDGDDNYYSVGQPFAGGPWTVIASMPRKEIS
ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCHHHHH
EVTWHVGTQLAIGSLLAMLIAVISAIWLLRSKLRPLSELVRQADALGAGDLSVRLNVTSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCC
DEIGQLSGSFNKMSEALSSMVSHIRTAAQEVSTRANVLSGLSGGAFEGMEQQSGEITSMA
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHH
GAVEEFSATSMNIADNMGNTERLAQENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVID
HHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGQRSQEIGSIVGVITSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRE
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
ATDEISGMIASIQQETGNAISTMQQGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAA
HHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEE
ITTATQEQSSTATMLSSNLQSIAMANSEQRQVMSNLAITAQELNGLATELRHEVDRFR
EEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKPRTRIASQLGIALAVILAVVISGSTLFALRSLDASNLVIREEHMSSEARLLADQLNT
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCEEEHHHCCHHHHHHHHHHHH
FHSTLRDSTQRLSGLFEKRFAAGLSLQADKPVTVAGTSTPGLFLRDAALNNDFTEVDEFR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCEEEHHHCCCCHHHHHHHH
SMTAGVATIFVRSGDDFIRISTSLSKQDGTRAIGTVLDRKGAAYERLIAGQSYVGKAVLF
HHHHHHHEEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH
DRYYMTQYSPVRDSSGKIIAALFVGFDYTDAQKTQFDNLKSFRIGSTGSLALLDDKGTWL
HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCHHEECCCCCCEEEEECCCCEE
VPPAGVKSLEGAAKSVAELASKPGKAQFWDDGDDNYYSVGQPFAGGPWTVIASMPRKEIS
ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCHHHHH
EVTWHVGTQLAIGSLLAMLIAVISAIWLLRSKLRPLSELVRQADALGAGDLSVRLNVTSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEECCC
DEIGQLSGSFNKMSEALSSMVSHIRTAAQEVSTRANVLSGLSGGAFEGMEQQSGEITSMA
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHH
GAVEEFSATSMNIADNMGNTERLAQENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVID
HHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGQRSQEIGSIVGVITSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRE
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
ATDEISGMIASIQQETGNAISTMQQGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAA
HHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEE
ITTATQEQSSTATMLSSNLQSIAMANSEQRQVMSNLAITAQELNGLATELRHEVDRFR
EEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA