| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yjbB [H]
Identifier: 66043340
GI number: 66043340
Start: 70375
End: 72027
Strand: Reverse
Name: yjbB [H]
Synonym: Psyr_0069
Alternate gene names: 66043340
Gene position: 72027-70375 (Counterclockwise)
Preceding gene: 66043342
Following gene: 66043339
Centisome position: 1.18
GC content: 62.37
Gene sequence:
>1653_bases ATGCTGACCCTGCTCGATTTGCTATCCGCCGTCGCCCTGCTGATCTGGGGCACGCATATCGTGCGCACTGGCATCCTTCG TGTTTACGGTACACAACTTCGTCGTGTGCTCAGCCAGAACATGTCCAAACGACCGCTCGCGTTCATCGCCGGCATTCTGG TGACAGCGCTGGTGCAGAGCAGTAACGCCACCGCCATGCTGGTGACGTCGTTCGTCGGCCAGGGGCTGATGACGCTGACG CCTGCGCTGGTGATCATGCTTGGCGCCGATGTCGGCACCGCCTTGATGTCTCGCGTGCTGACCTTCGATCTGTCATGGCT GTCGCCGTTATTGATCTTCCTTGGCGTGGTGTTCTTCCTGTCGCGCAAGCAGACCCGTGCCGGTCAACTGGGGCGGGTCG GTATCGGCCTGGGCCTGATCGTGCTGGCCTTGCAGCTGATCGTCGAGGCCGCCGCACCGATCACCCAGGCCGCGGGGGTC AAGGTGCTGTTCGCCTCGCTGACCGGCGACCTGCTGCTGGATGCGCTGGTGGGCGCCATGTTCGCGCTGATCTCCTATTC CAGCTTGGCAGCAGTGCTGCTGACGGCGACACTGGCGGGCACCGAGGTCATTGGCTTGCCGGTGGCCATCGGCCTGGTGA TCGGGGCCAACATCGGCAGCGGCCTGCTGGCGTTCCTCAGTACCAGCATGCAGAACGTTGCCGGTCGGCAGGTGGCGCTG GGCAGTCTTCTGTACAAGCTGTTCGGCCTGCTGCTGATCTTTCCGGTGCTCGATCCGCTGGTTGCCTGGATCGACACGCT GGGCTTCAGTCCGCAGGAACTGGTGATCGGCTTTCACCTGCTCTACAACACGGTACGCTGCCTGATCATGCTGCCTACCG TGGCTCCGATGGCGCGGCTCTGTTCGTATCTGCTGCCGCAACAGAACGAAGTCGGCGGCCTGGCCAAACCGCGTCATCTG GACCTGACCGCCCTGTCGACGCCCAGCCTTGCGCTGGCCAACGCAGTGCGTGAAACCCTGCGTATGGGCGATCTGATCGA AAGCATGCTCGCCTCGATGCTGGCGGTGCTGCGCGGCACGCAAACCGCAGTGACCCAGGAAGTGCGCCGCCTCAACGACG ACGTCGAAGCGTTGTACAGCGCGATCAAGCTGTACCTGGCGCAGATGCCGCGTGAAGACCTCGGCGAGCACGATAACCGG CGCTGGGCCGAGATCATCGAGCTGACCATCAACCTGGAACTGGCCAGCGGCCTGATCGAACGCATGCTGCGCAAGATCCA GCAGCAGAAGACGGCGCATCGCCGGTCGTTCTCTGAAGTCGGTCTTGAAGAACTTGCCGATCTGCAGATTCAATTACAGT CGAACCTGCGTCTGGGCCTCTCGGTGTTCCTCAGCGGCGATCACGAGAGCGCCCGTCAGTTATTGCGCGAAAAGCGTCAG TTCAGGGCCGAGGAGCGACGCCTGGCACACGCCCATGTCAGCCGCCTGCGCAACAAGGTGGTCCAGAGTATCGAAACCAG TTCGCTGCACCTGGAACTGATTGCCGACATGAAGCGTCTGAACTCGCTGTTCTGCAGCAGCGCCTACGTGGTGCTGGAAA CCGCTGACACAGGCGCCTTGTCGAGCGAGGTCGAGGCCGACAGATCACTCTGA
Upstream 100 bases:
>100_bases CGACTAAAAGCTTAGTAGAGCGTTACACCCATCCCCGCTCGCTACACGCTGCATCTTTCAATTCATCGCCTGTATGGGCA AACCTCAGGGGGCTTTTCGC
Downstream 100 bases:
>100_bases ACGTAAGGGCGCAGGTGAAGTCTGTTAAACATACCGGCCCGCCAGGAAAGCTGTTTTATGCGTTGCCTGCTGTTCGCTTG TCTGCTCCTCGGTTCACTCC
Product: Na+/Pi-cotransporter:Na/Pi cotransporter II-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MLTLLDLLSAVALLIWGTHIVRTGILRVYGTQLRRVLSQNMSKRPLAFIAGILVTALVQSSNATAMLVTSFVGQGLMTLT PALVIMLGADVGTALMSRVLTFDLSWLSPLLIFLGVVFFLSRKQTRAGQLGRVGIGLGLIVLALQLIVEAAAPITQAAGV KVLFASLTGDLLLDALVGAMFALISYSSLAAVLLTATLAGTEVIGLPVAIGLVIGANIGSGLLAFLSTSMQNVAGRQVAL GSLLYKLFGLLLIFPVLDPLVAWIDTLGFSPQELVIGFHLLYNTVRCLIMLPTVAPMARLCSYLLPQQNEVGGLAKPRHL DLTALSTPSLALANAVRETLRMGDLIESMLASMLAVLRGTQTAVTQEVRRLNDDVEALYSAIKLYLAQMPREDLGEHDNR RWAEIIELTINLELASGLIERMLRKIQQQKTAHRRSFSEVGLEELADLQIQLQSNLRLGLSVFLSGDHESARQLLREKRQ FRAEERRLAHAHVSRLRNKVVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETADTGALSSEVEADRSL
Sequences:
>Translated_550_residues MLTLLDLLSAVALLIWGTHIVRTGILRVYGTQLRRVLSQNMSKRPLAFIAGILVTALVQSSNATAMLVTSFVGQGLMTLT PALVIMLGADVGTALMSRVLTFDLSWLSPLLIFLGVVFFLSRKQTRAGQLGRVGIGLGLIVLALQLIVEAAAPITQAAGV KVLFASLTGDLLLDALVGAMFALISYSSLAAVLLTATLAGTEVIGLPVAIGLVIGANIGSGLLAFLSTSMQNVAGRQVAL GSLLYKLFGLLLIFPVLDPLVAWIDTLGFSPQELVIGFHLLYNTVRCLIMLPTVAPMARLCSYLLPQQNEVGGLAKPRHL DLTALSTPSLALANAVRETLRMGDLIESMLASMLAVLRGTQTAVTQEVRRLNDDVEALYSAIKLYLAQMPREDLGEHDNR RWAEIIELTINLELASGLIERMLRKIQQQKTAHRRSFSEVGLEELADLQIQLQSNLRLGLSVFLSGDHESARQLLREKRQ FRAEERRLAHAHVSRLRNKVVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETADTGALSSEVEADRSL >Mature_550_residues MLTLLDLLSAVALLIWGTHIVRTGILRVYGTQLRRVLSQNMSKRPLAFIAGILVTALVQSSNATAMLVTSFVGQGLMTLT PALVIMLGADVGTALMSRVLTFDLSWLSPLLIFLGVVFFLSRKQTRAGQLGRVGIGLGLIVLALQLIVEAAAPITQAAGV KVLFASLTGDLLLDALVGAMFALISYSSLAAVLLTATLAGTEVIGLPVAIGLVIGANIGSGLLAFLSTSMQNVAGRQVAL GSLLYKLFGLLLIFPVLDPLVAWIDTLGFSPQELVIGFHLLYNTVRCLIMLPTVAPMARLCSYLLPQQNEVGGLAKPRHL DLTALSTPSLALANAVRETLRMGDLIESMLASMLAVLRGTQTAVTQEVRRLNDDVEALYSAIKLYLAQMPREDLGEHDNR RWAEIIELTINLELASGLIERMLRKIQQQKTAHRRSFSEVGLEELADLQIQLQSNLRLGLSVFLSGDHESARQLLREKRQ FRAEERRLAHAHVSRLRNKVVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETADTGALSSEVEADRSL
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=536, Percent_Identity=64.1791044776119, Blast_Score=637, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59698; Mature: 59698
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLLDLLSAVALLIWGTHIVRTGILRVYGTQLRRVLSQNMSKRPLAFIAGILVTALVQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC SNATAMLVTSFVGQGLMTLTPALVIMLGADVGTALMSRVLTFDLSWLSPLLIFLGVVFFL CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKQTRAGQLGRVGIGLGLIVLALQLIVEAAAPITQAAGVKVLFASLTGDLLLDALVGAM HCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHH FALISYSSLAAVLLTATLAGTEVIGLPVAIGLVIGANIGSGLLAFLSTSMQNVAGRQVAL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH GSLLYKLFGLLLIFPVLDPLVAWIDTLGFSPQELVIGFHLLYNTVRCLIMLPTVAPMARL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSYLLPQQNEVGGLAKPRHLDLTALSTPSLALANAVRETLRMGDLIESMLASMLAVLRGT HHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QTAVTQEVRRLNDDVEALYSAIKLYLAQMPREDLGEHDNRRWAEIIELTINLELASGLIE HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RMLRKIQQQKTAHRRSFSEVGLEELADLQIQLQSNLRLGLSVFLSGDHESARQLLREKRQ HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH FRAEERRLAHAHVSRLRNKVVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETADTGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC SSEVEADRSL HHHHHHCCCC >Mature Secondary Structure MLTLLDLLSAVALLIWGTHIVRTGILRVYGTQLRRVLSQNMSKRPLAFIAGILVTALVQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC SNATAMLVTSFVGQGLMTLTPALVIMLGADVGTALMSRVLTFDLSWLSPLLIFLGVVFFL CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKQTRAGQLGRVGIGLGLIVLALQLIVEAAAPITQAAGVKVLFASLTGDLLLDALVGAM HCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHH FALISYSSLAAVLLTATLAGTEVIGLPVAIGLVIGANIGSGLLAFLSTSMQNVAGRQVAL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH GSLLYKLFGLLLIFPVLDPLVAWIDTLGFSPQELVIGFHLLYNTVRCLIMLPTVAPMARL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSYLLPQQNEVGGLAKPRHLDLTALSTPSLALANAVRETLRMGDLIESMLASMLAVLRGT HHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QTAVTQEVRRLNDDVEALYSAIKLYLAQMPREDLGEHDNRRWAEIIELTINLELASGLIE HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RMLRKIQQQKTAHRRSFSEVGLEELADLQIQLQSNLRLGLSVFLSGDHESARQLLREKRQ HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH FRAEERRLAHAHVSRLRNKVVQSIETSSLHLELIADMKRLNSLFCSSAYVVLETADTGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC SSEVEADRSL HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]