| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043341
Identifier: 66043341
GI number: 66043341
Start: 72227
End: 73060
Strand: Direct
Name: 66043341
Synonym: Psyr_0070
Alternate gene names: NA
Gene position: 72227-73060 (Clockwise)
Preceding gene: 66043337
Following gene: 66043344
Centisome position: 1.19
GC content: 60.67
Gene sequence:
>834_bases ATGGGGATGCGCTTTGTAGCGCTTCGCGCCACGCTACACGCTCAAAATCGGACGCAGAGCGTCCAGAACGGCATACCCAC GCGGAGCATGGGTACGATGATGTCCTTGAGCACCTATCGTTCCTCACGCTCCAGCGTGGGACTGCTCTTCGTGACGCTGC GCGTCATAACTCTGCGTCACGCCACACATTCAGGACCGGACGCAGAGCGTCCAGAACGGCATACCCACGCGGAGCATGGG TACGATGATGTCCTTGAGAGCACCTATCGTTCCTCACGCTCCAGCGTGGGAATGCTCTTCGTGACGCTCCGCGTCATAAC TCTGCGCCACGCCACACATTCAGGACCGGACGCAGAGCGTCCAGAACGGCATACCCACGCGGAGCATGGGTACGATGGTG TCCTTGAGAGCACCTATCGTTCCTCACGCTCCAGCGTGGGAATGCTCTTCGTGATGCTCCGCGTCATAACTCTGCGCCAC GCCACACATTCAGGACCGGACGCAGAGCGTCCAGAGCGGCATACCCACGCGGAGCATGGGTACGATGGTGTCCTTGAGAG CGCCTATCGTTCCTCACACTCCAGCGTGGGACTGCTCTTCGTGACGCTGCGCGTCATAACTCTGCGTCACGCCACACATT CAGGATCGGACGCAGAGCGTCCAGAGCGGCATACCCACGCGGAGCATGGGTACGATGGTGTTCTTGAGAGCCGCTATCGC TCTCCGACGCAGAGCGTCGGCGCGATAATCGTGCGCCCTTCAGCAGCCATCAACGGAACCGGTCAACCTCGTGACGCAGT TCTGTCGCCAGGCCATTCAGCTCCTGGGCGGTGA
Upstream 100 bases:
>100_bases GGCCATGGGCCTTGGCGCCAGCATCGCACAGCGTGTATTTCATTGAAATAAAAGTGTCATAAATCAGTGCCCATTCGCGT CTCGTTCTTCACGCTCCCAA
Downstream 100 bases:
>100_bases TGGCCAGGTTGGACATGACCTGGCGCTGTTCACTGTTGGCCATGGCGATGCTTTGCAGGTTGCTGCTGAGCATGGTCGCA GTGCTGCTTTGTTCCTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGMRFVALRATLHAQNRTQSVQNGIPTRSMGTMMSLSTYRSSRSSVGLLFVTLRVITLRHATHSGPDAERPERHTHAEHG YDDVLESTYRSSRSSVGMLFVTLRVITLRHATHSGPDAERPERHTHAEHGYDGVLESTYRSSRSSVGMLFVMLRVITLRH ATHSGPDAERPERHTHAEHGYDGVLESAYRSSHSSVGLLFVTLRVITLRHATHSGSDAERPERHTHAEHGYDGVLESRYR SPTQSVGAIIVRPSAAINGTGQPRDAVLSPGHSAPGR
Sequences:
>Translated_277_residues MGMRFVALRATLHAQNRTQSVQNGIPTRSMGTMMSLSTYRSSRSSVGLLFVTLRVITLRHATHSGPDAERPERHTHAEHG YDDVLESTYRSSRSSVGMLFVTLRVITLRHATHSGPDAERPERHTHAEHGYDGVLESTYRSSRSSVGMLFVMLRVITLRH ATHSGPDAERPERHTHAEHGYDGVLESAYRSSHSSVGLLFVTLRVITLRHATHSGSDAERPERHTHAEHGYDGVLESRYR SPTQSVGAIIVRPSAAINGTGQPRDAVLSPGHSAPGR >Mature_276_residues GMRFVALRATLHAQNRTQSVQNGIPTRSMGTMMSLSTYRSSRSSVGLLFVTLRVITLRHATHSGPDAERPERHTHAEHGY DDVLESTYRSSRSSVGMLFVTLRVITLRHATHSGPDAERPERHTHAEHGYDGVLESTYRSSRSSVGMLFVMLRVITLRHA THSGPDAERPERHTHAEHGYDGVLESAYRSSHSSVGLLFVTLRVITLRHATHSGSDAERPERHTHAEHGYDGVLESRYRS PTQSVGAIIVRPSAAINGTGQPRDAVLSPGHSAPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30556; Mature: 30424
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMRFVALRATLHAQNRTQSVQNGIPTRSMGTMMSLSTYRSSRSSVGLLFVTLRVITLRH CCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ATHSGPDAERPERHTHAEHGYDDVLESTYRSSRSSVGMLFVTLRVITLRHATHSGPDAER HCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PERHTHAEHGYDGVLESTYRSSRSSVGMLFVMLRVITLRHATHSGPDAERPERHTHAEHG CCHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHCC YDGVLESAYRSSHSSVGLLFVTLRVITLRHATHSGSDAERPERHTHAEHGYDGVLESRYR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHC SPTQSVGAIIVRPSAAINGTGQPRDAVLSPGHSAPGR CCHHHCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure GMRFVALRATLHAQNRTQSVQNGIPTRSMGTMMSLSTYRSSRSSVGLLFVTLRVITLRH CCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ATHSGPDAERPERHTHAEHGYDDVLESTYRSSRSSVGMLFVTLRVITLRHATHSGPDAER HCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PERHTHAEHGYDGVLESTYRSSRSSVGMLFVMLRVITLRHATHSGPDAERPERHTHAEHG CCHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHCC YDGVLESAYRSSHSSVGLLFVTLRVITLRHATHSGSDAERPERHTHAEHGYDGVLESRYR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHC SPTQSVGAIIVRPSAAINGTGQPRDAVLSPGHSAPGR CCHHHCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA