| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043314
Identifier: 66043314
GI number: 66043314
Start: 44004
End: 45059
Strand: Direct
Name: 66043314
Synonym: Psyr_0043
Alternate gene names: NA
Gene position: 44004-45059 (Clockwise)
Preceding gene: 66043312
Following gene: 66043316
Centisome position: 0.72
GC content: 60.89
Gene sequence:
>1056_bases ATGGCCACATTCGCCCTGCCACGCCTTCGCCACCTGCTAGCGCTGACGGCCGTCACGCTGCTGACCGGCTGCTCCAGCGT TTCCTACTACAGCCAGTTGGCGCAGGGTCAGTGGCAGTTGCTGCAGGCCCGTGAGCCGGTGGAGAAGATCATTGCTGACC CGACTCGGGATGCAGGTTTGCGCAGGCATCTGGCCCAGTCACAGTTGGCGCGGGCGTTTGCCAGTGAGCATTTGCATCTG CCGGACAACAAGAGTTACCGCCTGTATGCCGATCTGGGCCGCCCTTATGTGGTGTGGAATGTGTTCGCGACGGATGAGTT CTCGCTGGAGCCGGTCACGCATTGTTTTCCGATTGCCGGGTGTGTCGCGTATCGCGGTTATTACAGCCCTGGCGGGGCGC GTGGCGAGGCGGCGTTGCAGCGGCAGGCGGGCAAGGATGTGTATTTGAGTGGCGTGGAAGCCTATTCGACGCTGGGTTGG TTCAATGATCCGATTCTCAGTTCGATGATGGGCTGGGGTGACGAGCGTCTGGCCACGCTGATTTTTCATGAATTGGCGCA TCAGCGTTTTTATGTGAAGGACGACACGGAGTTCAACGAGTCCTACGCCAGTTTCGTCGAGCAGGAAGGTACGCGGCAAT GGCGTGCGGCGCGGGGATTGCCGCCGGAGAGTGTTTCGCAGTCGGCACGGCGTGATCAGTTTACCCGGCTGGTGCTCGAC ACCCGGGAGCGACTCAAGGCGCTTTATCGTCAGCCGCTGTCGGCCGAAGTGATGCGCGCGCGCAAGGCTGAGGAATTCGA GCGGATGCGCCGTGACTACCGCGCGTTGCGGGATGAGCAGTGGGCTGGCGACAAGCGTTTCGATGCCTGGATCAACAGCC CGATGAACAACGCTAAACTGCTGCCTTTTGGTCTTTACGATCAATGGGTGCCAGCGTTCGAGACGTTGTTCAGGCAGGAG AATGGCGACTGGCAGGCTTTTTATCGAGCGGTGGAGAAGCTGGGCGGGATGCCTGCCGAGGCGCGCAAGGCGGCGCTGCA GGCGTTGATGCCTTGA
Upstream 100 bases:
>100_bases AGCGCATGTGGGCGGTTCCGGATTGTGTGAATTGAGCATAGCCTGCCACATCCGTCCGGCATAACATCACCTTCTCCACA TAACCAAAGCCCTTCCCTTC
Downstream 100 bases:
>100_bases AGCTCCTGTGGGAGCGAGCTTGCTCGCGAAGAGGTCGGTACAGCGCCCACACAAAGGGCGTTTGAACCGCGGTCTTCGCG AACAAGCGAAGCGTCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Aminopeptidase; Aminopeptidase-Like Protein; Lipoprotein
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGLRRHLAQSQLARAFASEHLHL PDNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAGCVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGW FNDPILSSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLD TRERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKLLPFGLYDQWVPAFETLFRQE NGDWQAFYRAVEKLGGMPAEARKAALQALMP
Sequences:
>Translated_351_residues MATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGLRRHLAQSQLARAFASEHLHL PDNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAGCVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGW FNDPILSSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLD TRERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKLLPFGLYDQWVPAFETLFRQE NGDWQAFYRAVEKLGGMPAEARKAALQALMP >Mature_350_residues ATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGLRRHLAQSQLARAFASEHLHLP DNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAGCVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGWF NDPILSSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLDT RERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKLLPFGLYDQWVPAFETLFRQEN GDWQAFYRAVEKLGGMPAEARKAALQALMP
Specific function: Unknown
COG id: COG4324
COG function: function code R; Predicted aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40204; Mature: 40073
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGL CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RRHLAQSQLARAFASEHLHLPDNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAG HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH CVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGWFNDPILSSMMGWGDERLATL HHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH IFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLD HHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TRERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEE LPFGLYDQWVPAFETLFRQENGDWQAFYRAVEKLGGMPAEARKAALQALMP CEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure ATFALPRLRHLLALTAVTLLTGCSSVSYYSQLAQGQWQLLQAREPVEKIIADPTRDAGL CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RRHLAQSQLARAFASEHLHLPDNKSYRLYADLGRPYVVWNVFATDEFSLEPVTHCFPIAG HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHH CVAYRGYYSPGGARGEAALQRQAGKDVYLSGVEAYSTLGWFNDPILSSMMGWGDERLATL HHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH IFHELAHQRFYVKDDTEFNESYASFVEQEGTRQWRAARGLPPESVSQSARRDQFTRLVLD HHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TRERLKALYRQPLSAEVMRARKAEEFERMRRDYRALRDEQWAGDKRFDAWINSPMNNAKL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEE LPFGLYDQWVPAFETLFRQENGDWQAFYRAVEKLGGMPAEARKAALQALMP CEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA