| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is serB [H]
Identifier: 62391362
GI number: 62391362
Start: 2641228
End: 2642568
Strand: Reverse
Name: serB [H]
Synonym: cg2779
Alternate gene names: 62391362
Gene position: 2642568-2641228 (Counterclockwise)
Preceding gene: 62391363
Following gene: 62391361
Centisome position: 80.5
GC content: 55.63
Gene sequence:
>1341_bases ATGTCGTGTTCCGCGCTCAGACATGAGACAATTGTTGCCGTGACTGAACTCATCCAGAATGAATCCCAAGAAATCGCTGA GCTGGAAGCCGGCCAGCAGGTTGCATTGCGTGAAGGTTATCTTCCTGCGGTGATCACAGTGAGCGGTAAAGACCGCCCAG GTGTGACTGCCGCGTTCTTTAGGGTCTTGTCCGCTAATCAGGTTCAGGTCTTGGACGTTGAGCAGTCAATGTTCCGTGGC TTTTTGAACTTGGCGGCGTTTGTGGGTATCGCACCTGAGCGTGTCGAGACCGTCACCACAGGCCTGACTGACACCCTCAA GGTGCATGGACAGTCCGTGGTGGTGGAGCTGCAGGAAACTGTGCAGTCGTCCCGTCCTCGTTCTTCCCATGTTGTTGTGG TGTTGGGTGATCCGGTTGATGCGTTGGATATTTCCCGCATTGGTCAGACCCTGGCGGATTACGATGCCAACATTGACACC ATTCGTGGTATTTCGGATTACCCTGTGACCGGCCTGGAGCTGAAGGTGACTGTGCCGGATGTCAGCCCTGGTGGTGGTGA AGCGATGCGTAAGGCGCTTGCTGCTCTTACCTCTGAGCTGAATGTGGATATTGCGATTGAGCGTTCTGGTTTGCTGCGTC GTTCTAAGCGTCTGGTGTGCTTCGATTGTGATTCCACGTTGATCACTGGTGAGGTCATTGAGATGCTGGCGGCTCACGCG GGCAAGGAAGCTGAAGTTGCGGCAGTTACTGAGCGTGCGATGCGCGGTGAGCTCGATTTCGAGGAGTCTCTGCGTGAGCG TGTGAAGGCGTTGGCTGGTTTGGATGCGTCGGTGATCGATGAGGTCGCTGCCGCTATTGAGCTGACCCCTGGTGCGCGCA CCACGATCCGTACGCTGAACCGCATGGGTTACCAGACCGCTGTTGTTTCCGGTGGTTTCATCCAGGTGTTGGAAGGTTTG GCTGAGGAGTTGGAGTTGGATTATGTCCGCGCCAACACTTTGGAAATCGTTGATGGCAAGCTGACCGGCAACGTCACCGG AAAGATCGTTGACCGCGCTGCGAAGGCTGAGTTCCTCCGTGAGTTCGCTGCGGATTCTGGCCTGAAGATGTACCAGACTG TCGCTGTCGGTGATGGCGCTAATGACATCGATATGCTCTCCGCTGCGGGTCTGGGTGTTGCTTTCAACGCGAAGCCTGCG CTGAAGGAGATTGCGGATACTTCCGTGAACCACCCATTCCTCGACGAGGTTTTGCACATCATGGGCATTTCCCGCGACGA GATCGATCTGGCGGATCAGGAAGACGGCACTTTCCACCGCGTTCCATTGACCAATGCCTAA
Upstream 100 bases:
>100_bases GGCTGGTGCTTTTCATATTCCGACTTGGGGCACCCCTGAATACATCTCACCCAATTCCCCATAACTAGACAATTGCCCAG CAACGACTGATAAGTCTCCA
Downstream 100 bases:
>100_bases AGATTCGCTTCTCGACGCCCACCTCCTCCTCAAGGCCCGGGCTAGCGACGGGCCACATAGCGAGGATCCTTCGGATCCTT CGACCGTTCAGGCAATGCAG
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSCSALRHETIVAVTELIQNESQEIAELEAGQQVALREGYLPAVITVSGKDRPGVTAAFFRVLSANQVQVLDVEQSMFRG FLNLAAFVGIAPERVETVTTGLTDTLKVHGQSVVVELQETVQSSRPRSSHVVVVLGDPVDALDISRIGQTLADYDANIDT IRGISDYPVTGLELKVTVPDVSPGGGEAMRKALAALTSELNVDIAIERSGLLRRSKRLVCFDCDSTLITGEVIEMLAAHA GKEAEVAAVTERAMRGELDFEESLRERVKALAGLDASVIDEVAAAIELTPGARTTIRTLNRMGYQTAVVSGGFIQVLEGL AEELELDYVRANTLEIVDGKLTGNVTGKIVDRAAKAEFLREFAADSGLKMYQTVAVGDGANDIDMLSAAGLGVAFNAKPA LKEIADTSVNHPFLDEVLHIMGISRDEIDLADQEDGTFHRVPLTNA
Sequences:
>Translated_446_residues MSCSALRHETIVAVTELIQNESQEIAELEAGQQVALREGYLPAVITVSGKDRPGVTAAFFRVLSANQVQVLDVEQSMFRG FLNLAAFVGIAPERVETVTTGLTDTLKVHGQSVVVELQETVQSSRPRSSHVVVVLGDPVDALDISRIGQTLADYDANIDT IRGISDYPVTGLELKVTVPDVSPGGGEAMRKALAALTSELNVDIAIERSGLLRRSKRLVCFDCDSTLITGEVIEMLAAHA GKEAEVAAVTERAMRGELDFEESLRERVKALAGLDASVIDEVAAAIELTPGARTTIRTLNRMGYQTAVVSGGFIQVLEGL AEELELDYVRANTLEIVDGKLTGNVTGKIVDRAAKAEFLREFAADSGLKMYQTVAVGDGANDIDMLSAAGLGVAFNAKPA LKEIADTSVNHPFLDEVLHIMGISRDEIDLADQEDGTFHRVPLTNA >Mature_445_residues SCSALRHETIVAVTELIQNESQEIAELEAGQQVALREGYLPAVITVSGKDRPGVTAAFFRVLSANQVQVLDVEQSMFRGF LNLAAFVGIAPERVETVTTGLTDTLKVHGQSVVVELQETVQSSRPRSSHVVVVLGDPVDALDISRIGQTLADYDANIDTI RGISDYPVTGLELKVTVPDVSPGGGEAMRKALAALTSELNVDIAIERSGLLRRSKRLVCFDCDSTLITGEVIEMLAAHAG KEAEVAAVTERAMRGELDFEESLRERVKALAGLDASVIDEVAAAIELTPGARTTIRTLNRMGYQTAVVSGGFIQVLEGLA EELELDYVRANTLEIVDGKLTGNVTGKIVDRAAKAEFLREFAADSGLKMYQTVAVGDGANDIDMLSAAGLGVAFNAKPAL KEIADTSVNHPFLDEVLHIMGISRDEIDLADQEDGTFHRVPLTNA
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=195, Percent_Identity=29.2307692307692, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1790849, Length=214, Percent_Identity=45.7943925233645, Blast_Score=175, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6321647, Length=241, Percent_Identity=41.9087136929461, Blast_Score=191, Evalue=3e-49, Organism=Drosophila melanogaster, GI24661601, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 47756; Mature: 47625
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCSALRHETIVAVTELIQNESQEIAELEAGQQVALREGYLPAVITVSGKDRPGVTAAFF CCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCHHHHHH RVLSANQVQVLDVEQSMFRGFLNLAAFVGIAPERVETVTTGLTDTLKVHGQSVVVELQET HHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHH VQSSRPRSSHVVVVLGDPVDALDISRIGQTLADYDANIDTIRGISDYPVTGLELKVTVPD HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEECCC VSPGGGEAMRKALAALTSELNVDIAIERSGLLRRSKRLVCFDCDSTLITGEVIEMLAAHA CCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCEEEEECCCCEEHHHHHHHHHHHC GKEAEVAAVTERAMRGELDFEESLRERVKALAGLDASVIDEVAAAIELTPGARTTIRTLN CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCHHHHHHHH RMGYQTAVVSGGFIQVLEGLAEELELDYVRANTLEIVDGKLTGNVTGKIVDRAAKAEFLR HCCCHHEEECCCHHHHHHHHHHHHHHHHEECCEEEEECCEEECCCHHHHHHHHHHHHHHH EFAADSGLKMYQTVAVGDGANDIDMLSAAGLGVAFNAKPALKEIADTSVNHPFLDEVLHI HHHCCCCCEEEEEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHH MGISRDEIDLADQEDGTFHRVPLTNA HCCCCCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure SCSALRHETIVAVTELIQNESQEIAELEAGQQVALREGYLPAVITVSGKDRPGVTAAFF CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCHHHHHH RVLSANQVQVLDVEQSMFRGFLNLAAFVGIAPERVETVTTGLTDTLKVHGQSVVVELQET HHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHH VQSSRPRSSHVVVVLGDPVDALDISRIGQTLADYDANIDTIRGISDYPVTGLELKVTVPD HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEECCC VSPGGGEAMRKALAALTSELNVDIAIERSGLLRRSKRLVCFDCDSTLITGEVIEMLAAHA CCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCEEEEECCCCEEHHHHHHHHHHHC GKEAEVAAVTERAMRGELDFEESLRERVKALAGLDASVIDEVAAAIELTPGARTTIRTLN CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCHHHHHHHH RMGYQTAVVSGGFIQVLEGLAEELELDYVRANTLEIVDGKLTGNVTGKIVDRAAKAEFLR HCCCHHEEECCCHHHHHHHHHHHHHHHHEECCEEEEECCEEECCCHHHHHHHHHHHHHHH EFAADSGLKMYQTVAVGDGANDIDMLSAAGLGVAFNAKPALKEIADTSVNHPFLDEVLHI HHHCCCCCEEEEEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHH MGISRDEIDLADQEDGTFHRVPLTNA HCCCCCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA