| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is dcp [H]
Identifier: 62391142
GI number: 62391142
Start: 2406477
End: 2408513
Strand: Reverse
Name: dcp [H]
Synonym: cg2527
Alternate gene names: 62391142
Gene position: 2408513-2406477 (Counterclockwise)
Preceding gene: 62391146
Following gene: 62391141
Centisome position: 73.37
GC content: 59.65
Gene sequence:
>2037_bases ATGACTGTTGAACACCTGCTCAAGCCCAGCACCTTGCCCTACCAGCTGCCCGATTTCGCAGCGATCAAGGTGGCTGATTT CCCGCCCGCCTTCGAACTCGCATTAGCTGAACACGATGCTGAAATTACAGCGATCGCTACCAATGAGGACGCTCCTACCT GGGAGAACACCATTGAGGCCCTGGAACGCGCAGGCCTGTCCCTCAACCGCGTCGCCGCCGTATTCTTCAACTTGCAGGGC ACCGATTCCTCCCCTGAAATGGATGAAATCGCAGCCACTATCGCGCCGAAACTCTCCGCGCATTCGGATGCGATTTTCCA CAATGCTGCGCTTTTCGCGCGCATTGAGGCCGTAGAAGCACCGGCCGACGAGGAATCGCAACGCCTGTTGTCCCACACCA AGCGCGCTTTTCGACGTCGCGGTGCAGCACTCAACGCCGACGGCAAGGCCCGACTGAGCACCATCAACCAGCGCCTATCG GCACTGTCCGAACAGTTCGGCCGCAACCTGCTTCAGGACACCCGCGATCTGGCGGTCAACTTTGAAGAATCTGAACTTGC CGGTTTTAGCGAAGCCCGCATATCCGCCGCCGCTGACTACGCAGCAGCAGTTGGCACCGAAGGCTACGTGGTTCCACTGG AACTGCCCACCGTGCAGTCAGAGCAGGCAGTATTAACCGAATCCGCCTCGCGTGCAAAGCTTTATGAAGCCTCCCAGAAG CGTGGCGCCAGCCTGAACAAGGACGTGCTGCTCGAAACCGTGCGTCTGCGTGCTGAACGCGCCACACTTTTAGGCTACGA CACCCACGCCGATTACGTCATCGAAGAAGAAACCGCCGATGACGTCGCAGCCGTGCGCGCCTTGCTTTATGATCTCGCCC CAGCCGCCTCTGCCAATGCGAAAGCCGAATACAAACTCTCCGCAGAAGAAGCAGAAGAACACGGCCAAAAAGTCGGCGCA GCTGACTGGAGCTTCTGGGAAGCCAAAGTCCGCGCCCGCGACTACGCCCTGGACGAAACCGAACTGCGCAACTACTTCCC ATTGAACCAAGTACTCCGTGACGGCGTCTTCTTCGCTGCTAACCGCCTCTACGGAATCACCGTGGAACCACGCCCTGACC TGCGCGGTTACGCCGAGGGCGTGGACGTCTGGGAAGTCCTCGATTCTGACGGCTCCGGCATCGGCCTGATCCTTACCGAC TACTACGGCCGACCATCCAAGCGGGGCGGCGCTTGGATGTCCAGCTTTGTCGACCAATCCGAGCTGCTAGGCACCAAGCC AGTCGTGGTCAACGTTATGGGTATTACCAAACCAACCACCGGCGAAGCACTACTCAGCCTCGATGAAGTAACCACCATCT TCCACGAATTCGGCCACGGCCTGCACGGCTTGCTGTCCAAGGTGCGCTACCCAAGCTTCTCCGGAACCTCCGTGCCCCGC GACTACGTAGAATTCCCCTCCCAGATCAACGAAAACTGGGCATTCGACCCTGCAGTAGTCCGCAACTACGCCCGCCACGT GGACACCGGCGACATCATTCCAGACTCCCTGCTTGAGGCAGTGGAAGCATCCCGCCAATTCGGACAAGGTTTTGCCACCT CCGAATACTTGGCAGCATCGATTATCGACCTGGCCTGGCACTCCCTGTCCACAGCGGAAGCCGCAGCAGTCAATGACATT GACCAATTCGAAGCCGACGCACTAGCCGCAGCAGGCCTCGACGTGGACAACATTGCACCGCGCTACCGATCCACCTACTT CAACCACATCTTTGCTGGCGGCTACTCAGCCGGCTACTACTCCTACCTGTGGGCGGAAGCACTCGACGCCGACGGCTTCG ACTGGTTTCGCGAAGAAGGCGCAGCCGGATCCGTGGCTTCCCTCGACGCAGCCCGCACCGCCGGCCAGAAATTCCGTGAC CTGGTCTTATCCCGCGGCGCAGCCTCCGACTACAGCAACGCCTTCGAAGAACTCCGTGGCCGTTCCAAAGACCTCGGCCC ACTTCTGCGCCGCCGAGGTCTGGCTGGGGCAATCTAA
Upstream 100 bases:
>100_bases AAATAATGGGGCTCGCCGGTGATGGTTCCCGCCGGGCATTCAACGGTGACGGAAGAGGTGGCAGACATGATGAAAACTCT AGCAACTAGTATCGGTCACT
Downstream 100 bases:
>100_bases ACAACCCGGTGTAGGCTAATAACCCATGACTGCATTCCTCGACCGGATCTCACAGCTGCTTACAACATCACCGCTGTGGA TCCAGTCACCGATCGTCATC
Product: peptidyl-dipeptidase A protein
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MTVEHLLKPSTLPYQLPDFAAIKVADFPPAFELALAEHDAEITAIATNEDAPTWENTIEALERAGLSLNRVAAVFFNLQG TDSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEAPADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLS ALSEQFGRNLLQDTRDLAVNFEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQK RGASLNKDVLLETVRLRAERATLLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANAKAEYKLSAEEAEEHGQKVGA ADWSFWEAKVRARDYALDETELRNYFPLNQVLRDGVFFAANRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTD YYGRPSKRGGAWMSSFVDQSELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPR DYVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVEASRQFGQGFATSEYLAASIIDLAWHSLSTAEAAAVNDI DQFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRD LVLSRGAASDYSNAFEELRGRSKDLGPLLRRRGLAGAI
Sequences:
>Translated_678_residues MTVEHLLKPSTLPYQLPDFAAIKVADFPPAFELALAEHDAEITAIATNEDAPTWENTIEALERAGLSLNRVAAVFFNLQG TDSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEAPADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLS ALSEQFGRNLLQDTRDLAVNFEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQK RGASLNKDVLLETVRLRAERATLLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANAKAEYKLSAEEAEEHGQKVGA ADWSFWEAKVRARDYALDETELRNYFPLNQVLRDGVFFAANRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTD YYGRPSKRGGAWMSSFVDQSELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPR DYVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVEASRQFGQGFATSEYLAASIIDLAWHSLSTAEAAAVNDI DQFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRD LVLSRGAASDYSNAFEELRGRSKDLGPLLRRRGLAGAI >Mature_677_residues TVEHLLKPSTLPYQLPDFAAIKVADFPPAFELALAEHDAEITAIATNEDAPTWENTIEALERAGLSLNRVAAVFFNLQGT DSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEAPADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLSA LSEQFGRNLLQDTRDLAVNFEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQKR GASLNKDVLLETVRLRAERATLLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANAKAEYKLSAEEAEEHGQKVGAA DWSFWEAKVRARDYALDETELRNYFPLNQVLRDGVFFAANRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTDY YGRPSKRGGAWMSSFVDQSELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPRD YVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVEASRQFGQGFATSEYLAASIIDLAWHSLSTAEAAAVNDID QFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRDL VLSRGAASDYSNAFEELRGRSKDLGPLLRRRGLAGAI
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=566, Percent_Identity=30.2120141342756, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI14149738, Length=644, Percent_Identity=27.3291925465839, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI156105687, Length=633, Percent_Identity=22.5908372827804, Blast_Score=108, Evalue=1e-23, Organism=Escherichia coli, GI1787819, Length=690, Percent_Identity=39.7101449275362, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1789913, Length=692, Percent_Identity=30.7803468208092, Blast_Score=289, Evalue=5e-79, Organism=Caenorhabditis elegans, GI32565901, Length=501, Percent_Identity=21.7564870259481, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319793, Length=658, Percent_Identity=24.6200607902736, Blast_Score=179, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6322715, Length=579, Percent_Identity=22.9706390328152, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356111, Length=455, Percent_Identity=24.3956043956044, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI20129717, Length=417, Percent_Identity=27.5779376498801, Blast_Score=123, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 73881; Mature: 73749
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEHLLKPSTLPYQLPDFAAIKVADFPPAFELALAEHDAEITAIATNEDAPTWENTIEA CCHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH LERAGLSLNRVAAVFFNLQGTDSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEA HHHCCCCHHHEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC PADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLSALSEQFGRNLLQDTRDLAVN CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC FEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQK CCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHH RGASLNKDVLLETVRLRAERATLLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANA CCCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC KAEYKLSAEEAEEHGQKVGAADWSFWEAKVRARDYALDETELRNYFPLNQVLRDGVFFAA CCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCHHEEE NRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTDYYGRPSKRGGAWMSSFVDQS CCEEEEEECCCCCCCHHHCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH ELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPR HHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCH DYVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVEASRQFGQGFATSEYLAAS HHHHCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH IIDLAWHSLSTAEAAAVNDIDQFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCHHH SYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRDLVLSRGAASDYSNAFEELRG HHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC RSKDLGPLLRRRGLAGAI CCCCHHHHHHHCCCCCCC >Mature Secondary Structure TVEHLLKPSTLPYQLPDFAAIKVADFPPAFELALAEHDAEITAIATNEDAPTWENTIEA CHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH LERAGLSLNRVAAVFFNLQGTDSSPEMDEIAATIAPKLSAHSDAIFHNAALFARIEAVEA HHHCCCCHHHEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC PADEESQRLLSHTKRAFRRRGAALNADGKARLSTINQRLSALSEQFGRNLLQDTRDLAVN CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC FEESELAGFSEARISAAADYAAAVGTEGYVVPLELPTVQSEQAVLTESASRAKLYEASQK CCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCHHHHHHHHHHHH RGASLNKDVLLETVRLRAERATLLGYDTHADYVIEEETADDVAAVRALLYDLAPAASANA CCCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC KAEYKLSAEEAEEHGQKVGAADWSFWEAKVRARDYALDETELRNYFPLNQVLRDGVFFAA CCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCHHEEE NRLYGITVEPRPDLRGYAEGVDVWEVLDSDGSGIGLILTDYYGRPSKRGGAWMSSFVDQS CCEEEEEECCCCCCCHHHCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH ELLGTKPVVVNVMGITKPTTGEALLSLDEVTTIFHEFGHGLHGLLSKVRYPSFSGTSVPR HHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCH DYVEFPSQINENWAFDPAVVRNYARHVDTGDIIPDSLLEAVEASRQFGQGFATSEYLAAS HHHHCHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH IIDLAWHSLSTAEAAAVNDIDQFEADALAAAGLDVDNIAPRYRSTYFNHIFAGGYSAGYY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCHHH SYLWAEALDADGFDWFREEGAAGSVASLDAARTAGQKFRDLVLSRGAASDYSNAFEELRG HHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC RSKDLGPLLRRRGLAGAI CCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537804; 11677609 [H]