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The map label for this gene is recO [H]

Identifier: 62391125

GI number: 62391125

Start: 2388894

End: 2389622

Strand: Reverse

Name: recO [H]

Synonym: cg2509

Alternate gene names: 62391125

Gene position: 2389622-2388894 (Counterclockwise)

Preceding gene: 62391126

Following gene: 62391124

Centisome position: 72.79

GC content: 58.71

Gene sequence:

>729_bases
ATGCGTAGGGACAGTTTTCGGGACCGCGCGCTAGTAGTCAAAACTTATGATTTTGGCGAAGCCGACCGCATTATTGTGCT
GCTCACCCGAGACCACGGCATCGTGCGCGGAGTTGCCAAAGGAGTACGCCGATCCAAATCCCGGTTTGGGTCAAGGCTGC
AGCTTTTTGTGGAACTCGACGTGCAGCTCTACCCAGGTAGAAAACTGTCCACCATCTCTGGCGCGGACACCGTCGGCTAC
TACGCATCAGGCATCATCGAGGACTTCACTCGGTATTCCTGTGCGTCCGCCATCCTGGAAATCGCCACCCACATCGCAGG
ACTGGAAAACGATCCGCACCTGTTTGAAGAAACCACCCGGGCGTTGAAAAACATTCAGGACTCCCCAGAACCCATCCTCA
ACCTAGACGAGTTCATGCTCCGCGCCATGAACCACGCCGGCTGGGCACCAAGCCTTTTCGACTGCGCAGCCTGCGGCCGA
CCAGGACCTCACAACGCATTCCACCCAGGCGTCGGCGGGGCAGTGTGCCTGTACTGCCGACCGCCGGGAAGCGCCGAAGT
CCCACCAGAAGCACTACACATGATGTGGTTGGTCGCCAACGGCCAAGCAGCCCGCATTCCCCGGGAACACCCAGAGCAGC
AAACCACCATTCACCAACTGACAACCGCGCATCTGCAGTGGCATATTGAAAGAAAGCTGCCCACGCTGGCGGTGCTGGAT
CAGGCCTAG

Upstream 100 bases:

>100_bases
AAACGTATTCCTTGACCTGCGCATCAAGGTGCTGAAGAACTGGCAATCCGATCCAAAGGCTTTGAACCGCCTGGGCTTCT
AGCTTTAAGGGGGTGAGTTC

Downstream 100 bases:

>100_bases
TGCTTAGGCTTAGGCGTCCGGCTTTAAGGCCGAGGTGCCTGGCTGAACTGCAGCCCCTCCAGACCCTGAGATCAGGCTAA
ATGGCAAACACAAATAGTTT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRRDSFRDRALVVKTYDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYPGRKLSTISGADTVGY
YASGIIEDFTRYSCASAILEIATHIAGLENDPHLFEETTRALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGR
PGPHNAFHPGVGGAVCLYCRPPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
QA

Sequences:

>Translated_242_residues
MRRDSFRDRALVVKTYDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYPGRKLSTISGADTVGY
YASGIIEDFTRYSCASAILEIATHIAGLENDPHLFEETTRALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGR
PGPHNAFHPGVGGAVCLYCRPPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
QA
>Mature_242_residues
MRRDSFRDRALVVKTYDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELDVQLYPGRKLSTISGADTVGY
YASGIIEDFTRYSCASAILEIATHIAGLENDPHLFEETTRALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGR
PGPHNAFHPGVGGAVCLYCRPPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
QA

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26903; Mature: 26903

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDSFRDRALVVKTYDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELD
CCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE
VQLYPGRKLSTISGADTVGYYASGIIEDFTRYSCASAILEIATHIAGLENDPHLFEETTR
EEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGRPGPHNAFHPGVGGAVCLYCR
HHHCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
PPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
CCCCCCCCHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHCCCEEEEEC
QA
CC
>Mature Secondary Structure
MRRDSFRDRALVVKTYDFGEADRIIVLLTRDHGIVRGVAKGVRRSKSRFGSRLQLFVELD
CCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE
VQLYPGRKLSTISGADTVGYYASGIIEDFTRYSCASAILEIATHIAGLENDPHLFEETTR
EEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ALKNIQDSPEPILNLDEFMLRAMNHAGWAPSLFDCAACGRPGPHNAFHPGVGGAVCLYCR
HHHCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
PPGSAEVPPEALHMMWLVANGQAARIPREHPEQQTTIHQLTTAHLQWHIERKLPTLAVLD
CCCCCCCCHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHCCCEEEEEC
QA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA