| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is thrC
Identifier: 62391059
GI number: 62391059
Start: 2325269
End: 2326714
Strand: Reverse
Name: thrC
Synonym: cg2437
Alternate gene names: 62391059
Gene position: 2326714-2325269 (Counterclockwise)
Preceding gene: 62391060
Following gene: 62391056
Centisome position: 70.88
GC content: 56.15
Gene sequence:
>1446_bases GTGGACTACATTTCGACGCGTGATGCCAGCCGTACCCCTGCCCGCTTCAGTGATATTTTGCTGGGCGGTCTAGCACCAGA CGGCGGCCTGTACCTGCCTGCAACCTACCCTCAACTAGATGATGCCCAGCTGAGTAAATGGCGTGAGGTATTAGCCAACG AAGGATACGCAGCTTTGGCTGCTGAAGTTATCTCCCTGTTTGTTGATGACATCCCAGTAGAAGACATCAAGGCGATCACC GCACGCGCCTACACCTACCCGAAGTTCAACAGCGAAGACATCGTTCCTGTCACCGAACTCGAGGACAACATTTACCTGGG CCACCTTTCCGAAGGCCCAACCGCTGCATTCAAAGACATGGCCATGCAGCTGCTCGGCGAACTTTTCGAATACGAGCTTC GCCGCCGCAACGAAACCATCAACATCCTGGGCGCTACCTCTGGCGATACCGGCTCCTCTGCGGAATACGCCATGCGCGGC CGCGAGGGAATCCGCGTATTCATGCTGACCCCAGCTGGCCGCATGACCCCATTCCAGCAAGCACAGATGTTTGGCCTTGA CGATCCAAACATCTTCAACATCGCCCTCGACGGCGTTTTCGACGATTGCCAAGACGTAGTCAAGGCTGTCTCCGCCGACG CAGAATTCAAAAAAGACAACCGCATCGGTGCCGTGAACTCCATCAACTGGGCACGCCTTATGGCACAGGTTGTGTACTAC GTTTCCTCATGGATCCGCACCACAACCAGCAATGACCAAAAGGTCAGCTTCTCCGTACCAACCGGCAACTTCGGTGACAT TTGCGCAGGCCACATCGCCCGCCAAATGGGACTTCCCATCGATCGCCTCATCGTGGCCACCAACGAAAACGATGTGCTCG ACGAGTTCTTCCGTACCGGCGACTACCGAGTCCGCAGCTCCGCAGACACCCACGAGACCTCCTCACCTTCGATGGATATC TCCCGCGCCTCCAACTTCGAGCGTTTCATCTTCGACCTGCTCGGCCGCGACGCCACCCGCGTCAACGATCTATTTGGTAC CCAGGTTCGCCAAGGCGGATTCTCACTGGCTGATGACGCCAACTTTGAGAAGGCTGCAGCAGAATACGGTTTCGCCTCCG GACGATCCACCCATGCTGACCGTGTGGCAACCATCGCTGACGTGCATTCCCGCCTCGACGTACTAATCGATCCCCACACC GCCGACGGCGTTCACGTGGCACGCCAGTGGAGGGACGAGGTCAACACCCCAATCATCGTCCTAGAAACTGCACTCCCAGT GAAATTTGCCGACACCATCGTCGAAGCAATTGGTGAAGCACCTCAAACTCCAGAGCGTTTCGCCGCGATCATGGATGCTC CATTCAAGGTTTCCGACCTACCAAACGACACCGATGCAGTTAAGCAGTACATAGTCGATGCGATTGCAAACACTTCCGTG AAGTAA
Upstream 100 bases:
>100_bases GCAACACTTTAGGGTATCGCGTGGGCGAAGTCACCTTTTTCAACATATTTGAGACGGTGTGGGGGAGTATTGTGTCACCC CTTGGGATAGGGTTATATCC
Downstream 100 bases:
>100_bases CTTGCTTTACGCCAAGGCCTGATTCCTCTCTTTATGGGATGGAACCAGGCCTTTCGCATTGAGTGGCGTTTTAAGGCCTC CAATTCTTAGAACGGGTGTT
Product: threonine synthase
Products: NA
Alternate protein names: TS
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALAAEVISLFVDDIPVEDIKAIT ARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDMAMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRG REGIRVFMLTPAGRMTPFQQAQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTGDYRVRSSADTHETSSPSMDI SRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDANFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHT ADGVHVARQWRDEVNTPIIVLETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIANTSV K
Sequences:
>Translated_481_residues MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALAAEVISLFVDDIPVEDIKAIT ARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDMAMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRG REGIRVFMLTPAGRMTPFQQAQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTGDYRVRSSADTHETSSPSMDI SRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDANFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHT ADGVHVARQWRDEVNTPIIVLETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIANTSV K >Mature_481_residues MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALAAEVISLFVDDIPVEDIKAIT ARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDMAMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRG REGIRVFMLTPAGRMTPFQQAQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTGDYRVRSSADTHETSSPSMDI SRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDANFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHT ADGVHVARQWRDEVNTPIIVLETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIANTSV K
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family
Homologues:
Organism=Homo sapiens, GI149193323, Length=458, Percent_Identity=29.4759825327511, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI153792148, Length=460, Percent_Identity=31.5217391304348, Blast_Score=207, Evalue=2e-53, Organism=Escherichia coli, GI1786185, Length=464, Percent_Identity=28.8793103448276, Blast_Score=183, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319901, Length=467, Percent_Identity=39.6145610278373, Blast_Score=317, Evalue=4e-87,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): THRC_CORGL (P23669)
Other databases:
- EMBL: X56037 - EMBL: Z29563 - EMBL: BA000036 - EMBL: BX927154 - PIR: S11979 - RefSeq: NP_601423.1 - RefSeq: YP_226461.1 - ProteinModelPortal: P23669 - SMR: P23669 - GeneID: 1020172 - GeneID: 3342939 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg2437 - KEGG: cgl:NCgl2139 - HOGENOM: HBG521025 - OMA: FGRIAFQ - PhylomeDB: P23669 - ProtClustDB: PRK09225 - BioCyc: CGLU196627:CG2437-MONOMER - BRENDA: 4.2.3.1 - InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 - TIGRFAMs: TIGR00260
Pfam domain/function: PF00291 PALP; SSF53686 PyrdxlP-dep_enz_bsu
EC number: =4.2.3.1
Molecular weight: Translated: 52932; Mature: 52932
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALA CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCHHHHH AEVISLFVDDIPVEDIKAITARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDM HHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCEECCCCEEEEECCCCCHHHHHHH AMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRGREGIRVFMLTPAGRMTPFQQ HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHH AQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY HHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHH VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTG HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCC DYRVRSSADTHETSSPSMDISRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDA CEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC NFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHTADGVHVARQWRDEVNTPIIV CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHCCCCEEE LETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIANTSV EECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCC K C >Mature Secondary Structure MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALA CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCHHHHH AEVISLFVDDIPVEDIKAITARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDM HHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCEECCCCEEEEECCCCCHHHHHHH AMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRGREGIRVFMLTPAGRMTPFQQ HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHH AQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY HHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHH VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTG HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCC DYRVRSSADTHETSSPSMDISRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDA CEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC NFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHTADGVHVARQWRDEVNTPIIV CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHCCCCEEE LETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIANTSV EECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2127631; 12948626