Click here to switch to the map view.

The map label for this gene is ctaC

Identifier: 62391035

GI number: 62391035

Start: 2298590

End: 2299669

Strand: Reverse

Name: ctaC

Synonym: cg2409

Alternate gene names: 62391035

Gene position: 2299669-2298590 (Counterclockwise)

Preceding gene: 62391037

Following gene: 62391034

Centisome position: 70.05

GC content: 53.7

Gene sequence:

>1080_bases
GTGGAACAGCAAAATAAGCGTGGTTTAAAGCGCAAGGCCCTGCTTGGCGGTGTCTTGGGCTTAGGTGGCCTCGCCATGGC
AGGCTGTGAAGTCGCCCCTCCTGGCGGTGTGCTTGGAGATTTCCTACGTATGGGTTGGCCTGATGGCATTACCCCTGAAG
CAGTGGCCATGGGTAACTTCTGGTCATGGGTCTGGGTTGCTGCCTGGATCATCGGCATCATCATGTGGGGTCTATTCCTC
ACCGCCATCTTTGCCTGGGGCGCAAAGAGGGCTGAAAAGCGCGGCGAGGGTGAATTCCCTAAGCAGCTCCAGTACAACGT
TCCACTTGAGCTCGTTCTGACGATCGTTCCGATCATCATTGTTATGGTGCTGTTCTTCTTCACCGTTCAAACTCAGGACA
AGGTCACCGCTCTGGATAAGAACCCAGAGGTTACCGTGGACGTCACCGCTTACCAGTGGAACTGGAAGTTCGGATACTCC
GAAATTGATGGCTCACTGGCACCTGGTGGACAGGATTACCAAGGAAGCGACCCGGAGCGTCAGGCAGCTGCCGAGGCTTC
CAAGAAGGATCCTTCTGGAGATAACCCAATTCACGGCAACTCAAAGTCTGACGTTTCTTACCTTGAGTTCAACCGAATTG
AAACCCTCGGAACCACTGATGAAATCCCAGTGATGGTTCTTCCTGTGAACACCCCAATCGAGTTCAACCTCGCATCTGCT
GACGTTGCACACTCCTTCTGGGTTCCAGAGTTCCTCTTCAAGCGAGATGCTTACGCACACCCTGAGGCAAACAAGTCCCA
GCGTGTCTTCCAGATTGAAGAGATCACTGAGGAAGGCGCATTCGTTGGTCGCTGTGCAGAAATGTGCGGTACTTACCACG
CAATGATGAACTTCGAGCTTCGTGTCGTCGATCGCGATTCCTTCGCTGAGTACATCAGCTTCCGTGACTCCAACCCAGAC
GCAACCAACGCTCAGGCACTTGAGCACATTGGTCAAGCTCCTTACGCTACTTCCACTAGCCCATTCGTTTCCGATCGCAC
CGCAACCCGCGACGGCGAAAACACTCAGAGCAACGCTTAA

Upstream 100 bases:

>100_bases
AACACAAGATATGGAATCGGCTGGCAAATAGGCTATTCTGCGAAGATAGAAATGACCGTAAGGTCTCTGGTTTTTGTGTG
GACAGGAAGGCAGAACACAC

Downstream 100 bases:

>100_bases
GAAGGAGTGGCGAAAAAATGAAGTCTTCAGCAAAACTCATGTACGGCCCGACCGTATTCATGGCCGCAATGGCTGTCATC
TACATCTTCGCAACAATGCA

Product: cytochrome C oxidase chain II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGLFL
TAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYS
EIDGSLAPGGQDYQGSDPERQAAAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPVNTPIEFNLASA
DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPD
ATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA

Sequences:

>Translated_359_residues
MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGLFL
TAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYS
EIDGSLAPGGQDYQGSDPERQAAAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPVNTPIEFNLASA
DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPD
ATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA
>Mature_359_residues
MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNFWSWVWVAAWIIGIIMWGLFL
TAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIIIVMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYS
EIDGSLAPGGQDYQGSDPERQAAAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPVNTPIEFNLASA
DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFELRVVDRDSFAEYISFRDSNPD
ATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX2_CORGL (Q8NNK2)

Other databases:

- EMBL:   AB052749
- EMBL:   BA000036
- EMBL:   BX927154
- RefSeq:   NP_601399.1
- RefSeq:   YP_226437.1
- ProteinModelPortal:   Q8NNK2
- GeneID:   1020147
- GeneID:   3345096
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg2409
- KEGG:   cgl:NCgl2115
- HOGENOM:   HBG428789
- OMA:   YQWNWKF
- PhylomeDB:   Q8NNK2
- ProtClustDB:   CLSK2518737
- BioCyc:   CGLU196627:CG2409-MONOMER
- BRENDA:   1.9.3.1
- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- Gene3D:   G3DSA:1.10.287.90
- Gene3D:   G3DSA:2.60.40.420
- PANTHER:   PTHR22888
- PRINTS:   PR01166

Pfam domain/function: PF00116 COX2; SSF49503 Cupredoxin; SSF81464 Cyt_c_oxidase_II-like_TM

EC number: =1.9.3.1

Molecular weight: Translated: 39632; Mature: 39632

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00078 COX2; PS50857 COX2_CUA; PS50999 COX2_TM; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x149f0464)-; HASH(0x1503d2f8)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHEECCCH
WSWVWVAAWIIGIIMWGLFLTAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHH
VMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYSEIDGSLAPGGQDYQGSDPER
HHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEEEEECHHHCCCCCCCCCCCCCCCCHHH
QAAAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPVNTPIEFNLASA
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECHH
DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFEL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHEEEE
RVVDRDSFAEYISFRDSNPDATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA
EEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MEQQNKRGLKRKALLGGVLGLGGLAMAGCEVAPPGGVLGDFLRMGWPDGITPEAVAMGNF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHEECCCH
WSWVWVAAWIIGIIMWGLFLTAIFAWGAKRAEKRGEGEFPKQLQYNVPLELVLTIVPIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHH
VMVLFFFTVQTQDKVTALDKNPEVTVDVTAYQWNWKFGYSEIDGSLAPGGQDYQGSDPER
HHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEEEEEECHHHCCCCCCCCCCCCCCCCHHH
QAAAEASKKDPSGDNPIHGNSKSDVSYLEFNRIETLGTTDEIPVMVLPVNTPIEFNLASA
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECHH
DVAHSFWVPEFLFKRDAYAHPEANKSQRVFQIEEITEEGAFVGRCAEMCGTYHAMMNFEL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHEEEE
RVVDRDSFAEYISFRDSNPDATNAQALEHIGQAPYATSTSPFVSDRTATRDGENTQSNA
EEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11577165; 12948626