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The map label for this gene is ctaF

Identifier: 62391034

GI number: 62391034

Start: 2298141

End: 2298572

Strand: Reverse

Name: ctaF

Synonym: cg2408

Alternate gene names: 62391034

Gene position: 2298572-2298141 (Counterclockwise)

Preceding gene: 62391035

Following gene: 62391033

Centisome position: 70.02

GC content: 53.47

Gene sequence:

>432_bases
ATGAAGTCTTCAGCAAAACTCATGTACGGCCCGACCGTATTCATGGCCGCAATGGCTGTCATCTACATCTTCGCAACAAT
GCACGTTAGTGATGGCGGCAGCGTTAAAGGTGTTGAGTGGGTCGGTTCTGTGGCCCTGGTCCTGTCAGCAGGTCTGACGC
TTATGCTCGGTGTCTACCTTCACTTCACTGAAGTCCGCGTAGATGTTCTTCCAGAGGACTGGGAAGAGGCTGAGGTTGCC
GACAAGGCAGGAACCCTCGGGTTCTTCAGCCCAAGCTCCATTTGGCCGGCAGCTATGTCCGGTGCGGTTGGATTCCTTGC
ATTCGGCGTTGTGTACTTCCACTACTGGATGATCGCAGTTGGTCTGATGCTCCTGATCTTCACGATCACCAAGCTCAACC
TTCAGTACGGCGTGCCAAAAGAAAAGCACTAG

Upstream 100 bases:

>100_bases
CTCCTTACGCTACTTCCACTAGCCCATTCGTTTCCGATCGCACCGCAACCCGCGACGGCGAAAACACTCAGAGCAACGCT
TAAGAAGGAGTGGCGAAAAA

Downstream 100 bases:

>100_bases
TACTAAAACCACATATGCTCAACCCTATTGGCTGTCCGATAGGGTTGAGCATTTTGTCGTTTTCACAGGCTTTTCCAACT
TTGATCACCGTGACGAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKSSAKLMYGPTVFMAAMAVIYIFATMHVSDGGSVKGVEWVGSVALVLSAGLTLMLGVYLHFTEVRVDVLPEDWEEAEVA
DKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAVGLMLLIFTITKLNLQYGVPKEKH

Sequences:

>Translated_143_residues
MKSSAKLMYGPTVFMAAMAVIYIFATMHVSDGGSVKGVEWVGSVALVLSAGLTLMLGVYLHFTEVRVDVLPEDWEEAEVA
DKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAVGLMLLIFTITKLNLQYGVPKEKH
>Mature_143_residues
MKSSAKLMYGPTVFMAAMAVIYIFATMHVSDGGSVKGVEWVGSVALVLSAGLTLMLGVYLHFTEVRVDVLPEDWEEAEVA
DKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAVGLMLLIFTITKLNLQYGVPKEKH

Specific function: Part of cytochrome c oxidase, its function is unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COX4_CORGL (Q8NNK3)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927154
- RefSeq:   NP_601398.1
- RefSeq:   YP_226436.1
- GeneID:   1020146
- GeneID:   3345095
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg2408
- KEGG:   cgl:NCgl2114
- HOGENOM:   HBG566773
- OMA:   WEEAEVA
- ProtClustDB:   CLSK2518736
- BioCyc:   CGLU196627:CG2408-MONOMER
- BRENDA:   1.9.3.1
- InterPro:   IPR021050

Pfam domain/function: PF12270 Cyt_c_ox_IV

EC number: =1.9.3.1

Molecular weight: Translated: 15546; Mature: 15546

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14eb9a30)-; HASH(0x1458f8a8)-; HASH(0x13574688)-; HASH(0x1480e360)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSAKLMYGPTVFMAAMAVIYIFATMHVSDGGSVKGVEWVGSVALVLSAGLTLMLGVYL
CCCCCCEEECHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HFTEVRVDVLPEDWEEAEVADKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAV
HHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLMLLIFTITKLNLQYGVPKEKH
HHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MKSSAKLMYGPTVFMAAMAVIYIFATMHVSDGGSVKGVEWVGSVALVLSAGLTLMLGVYL
CCCCCCEEECHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HFTEVRVDVLPEDWEEAEVADKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAV
HHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLMLLIFTITKLNLQYGVPKEKH
HHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12948626