| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yhgE [H]
Identifier: 62390521
GI number: 62390521
Start: 1740179
End: 1742038
Strand: Reverse
Name: yhgE [H]
Synonym: cg1844
Alternate gene names: 62390521
Gene position: 1742038-1740179 (Counterclockwise)
Preceding gene: 62390522
Following gene: 62390520
Centisome position: 53.07
GC content: 58.06
Gene sequence:
>1860_bases ATGGCATTTTTACACTTTGGCTCAGAACTGAAACGATTTGGCCGCGGAAAACTCCCACCATTGGGGTTTGTTGTGGTCAT GTTGCTGCCGTTGCTTTTCGGCGGCGTCTTTGTTTCTGCCTACTATGACCCCATCGGTGGCTTGTCCAAGCTTCCCGTGG CCGTGGTCAATCAGGACGAAGGTGAACTCGATGCCGGCGCCCAGGTGGTGGAGAACCTCCTGGAGCAAGACGACATCAAA TTCATTGAAGTCAGCGCCGAGGAAGCCCGCGAGGGAATCAACGACGGCACCTACTACTTCGGCATTGAAATTCCGAAGAA CTTCAGCGATTCTATTGCCAGCGTGACCAGCGATTCACCCGCGCCAGCAACCGTCAACGCGGTATTCAACAACAGCAACG GCTTCATTGCCTCCATGCTGGGCAACCAGGTGGTCAACACTGTTGTGGAGACCATGGACACGGAATTCGGCGTCCGCATT GTGGATAACATGCTCGTCGGTTTCTCCACCTTGGGCGACGGCATGAACCAAGCCGCCGAAGGTGCCACTACGCTCAGCGA TGGCGTCGGTTCCGCCAACGACGGTGCAGTTCAGCTTGCCGACGGCGCGGTCACCCTGCGCGACGGCATCGCAAGTGCCA ATGAGGGTGCGCAATCGCTTGCCGACGGCGCCAGCCAGCTCGACACCGGCCTCGGCTCCGCGGCTACAGGCAGCCAAACG CTCGCCGACGGTCTATCCAGCCTGTCTGCGGGCACCGCCCAACTAGGCCAAGGCGCAACCCAGGTTTCAGATGGCGTGGG CCAACTTGTCGACCAAGTAGCACCACTGACCGCCTATGTTCCAGACATCAACTCTCAGTTGATCACCCTGCGCGACGGCG CAGCCACCATTGCCTCTGAACTATCTGATCCCTCCAGCACCTACCGCTCCGGCGTGGACTCCGCTGTGAGCGCATCCCAG CAACTAGCAGCCGGCCTGCAAACCCTGAAAGACGGATCCAGCCAACTCAGCATCGGTGCACGCACCCTCGCTGATGGCAC CAGCCAATTGGCCGCAGGTTCCGAACAGCTAGTTGTTGGCGCACAAGCACTGCGCGACGGCACCGTCCAGCTTGATGAAG GCTCCAGCGAACTCGCCCTCAAACTCACCGACGGCGCAAGCCAAGTACCAACCTTCGCTGACGGCGCAGACACCACCATC GCAACCCCAGTTGAAACAGAACAAGCAGGAGACACCACACCGCTCTTCGGTATTGGTCTCGCACCATTCTTCATGGCTGT CGGCCTGTTCATGGGAGCAACCGTTGCCTGGATGATCCTGCACCCAATCAGTCGCCGCGCACTCGACTCCCGCATGGGAG GCTTCCGAGGCACCCTGGCAAGCTACCTTCCATCAACAGTCTTAGGCCTTGGCCAAGCAACCATCATGTGGGCAGTACTG TACTTCCTGCTCGACCTCAATCCAGCTCACCCAGCTGGACTGTGGATGGCGATGGTCGCCATCTCATGGGTATTCATCTC CATTACCCATATGTTCAACAACGTGGCAGGACCCTCCGCAGGCCGTGTGCTGTCCATCGTGATGATGTCCTTCCAGCTAG TCTCCTCCGGTGGCCTATACCCACCAGAAACCCAGCCAGCATTCTTCCACTGGTTCCACACCTACGACCCGATCACCTAC GCAGTCAACCTCGTGCGCCAAATGATCTTCAACGAAACCCCATCCAACGACCCACGCTTCATACAAGCAATCTGGGTACT GCTCTTCATCTGGGCACTGATGCTCGCCATCTCCACCCTGGCGAATAGAACAAACAAGGTTCTTCGCATGAAGGACTACC ACCCAGAACTGAAGGTCTAA
Upstream 100 bases:
>100_bases AAGGCGTTGCAGAGGATCTCCCTGTGGTCGTGGTATCCACCAACCCAGATTTTGATTCCTTGGCCGATACCGCTTTGACC ATTACGGGGGCTGGAAACTA
Downstream 100 bases:
>100_bases AAGCTTTTCCCGCCCGGTTCAATAGCGTTAATGGCAGAATCAAACGCTATGGACCGGGCACAAATCTCTGCACTGCTAGA TAGAGCACAGCACACAATCA
Product: membrane protein
Products: NA
Alternate protein names: ORFB [H]
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MAFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDEGELDAGAQVVENLLEQDDIK FIEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSPAPATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRI VDNMLVGFSTLGDGMNQAAEGATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQT LADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTAYVPDINSQLITLRDGAATIASELSDPSSTYRSGVDSAVSASQ QLAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVGAQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTI ATPVETEQAGDTTPLFGIGLAPFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPSTVLGLGQATIMWAVL YFLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMSFQLVSSGGLYPPETQPAFFHWFHTYDPITY AVNLVRQMIFNETPSNDPRFIQAIWVLLFIWALMLAISTLANRTNKVLRMKDYHPELKV
Sequences:
>Translated_619_residues MAFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDEGELDAGAQVVENLLEQDDIK FIEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSPAPATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRI VDNMLVGFSTLGDGMNQAAEGATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQT LADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTAYVPDINSQLITLRDGAATIASELSDPSSTYRSGVDSAVSASQ QLAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVGAQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTI ATPVETEQAGDTTPLFGIGLAPFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPSTVLGLGQATIMWAVL YFLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMSFQLVSSGGLYPPETQPAFFHWFHTYDPITY AVNLVRQMIFNETPSNDPRFIQAIWVLLFIWALMLAISTLANRTNKVLRMKDYHPELKV >Mature_618_residues AFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDEGELDAGAQVVENLLEQDDIKF IEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSPAPATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRIV DNMLVGFSTLGDGMNQAAEGATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQTL ADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTAYVPDINSQLITLRDGAATIASELSDPSSTYRSGVDSAVSASQQ LAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVGAQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTIA TPVETEQAGDTTPLFGIGLAPFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPSTVLGLGQATIMWAVLY FLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMSFQLVSSGGLYPPETQPAFFHWFHTYDPITYA VNLVRQMIFNETPSNDPRFIQAIWVLLFIWALMLAISTLANRTNKVLRMKDYHPELKV
Specific function: Unknown
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To L.lactis phage infection protein (PIP) [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR022703 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane; PF12051 DUF3533 [H]
EC number: NA
Molecular weight: Translated: 64947; Mature: 64816
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDE CCEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC GELDAGAQVVENLLEQDDIKFIEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSP CCCHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCC APATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRIVDNMLVGFSTLGDGMNQAAE CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHC GATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQT CCCHHHCCCCCCCCCCEEEECCCEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH LADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTAYVPDINSQLITLRDGAATIASE HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCHHHHHHH LSDPSSTYRSGVDSAVSASQQLAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVG CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHCCHHHHHCCCCHHEEC AQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTIATPVETEQAGDTTPLFGIGL HHHHCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH APFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPSTVLGLGQATIMWAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH YFLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMSFQLVSSGGLY HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC PPETQPAFFHWFHTYDPITYAVNLVRQMIFNETPSNDPRFIQAIWVLLFIWALMLAISTL CCCCCCHHEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ANRTNKVLRMKDYHPELKV HHHHHHEEEEECCCCCCCC >Mature Secondary Structure AFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDE CEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC GELDAGAQVVENLLEQDDIKFIEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSP CCCHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCC APATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRIVDNMLVGFSTLGDGMNQAAE CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHC GATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQT CCCHHHCCCCCCCCCCEEEECCCEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH LADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTAYVPDINSQLITLRDGAATIASE HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCHHHHHHH LSDPSSTYRSGVDSAVSASQQLAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVG CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHCCHHHHHCCCCHHEEC AQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTIATPVETEQAGDTTPLFGIGL HHHHCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH APFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPSTVLGLGQATIMWAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH YFLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMSFQLVSSGGLY HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC PPETQPAFFHWFHTYDPITYAVNLVRQMIFNETPSNDPRFIQAIWVLLFIWALMLAISTL CCCCCCHHEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ANRTNKVLRMKDYHPELKV HHHHHHEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 1459957 [H]