| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is pgk [H]
Identifier: 62390469
GI number: 62390469
Start: 1682655
End: 1683872
Strand: Reverse
Name: pgk [H]
Synonym: cg1790
Alternate gene names: 62390469
Gene position: 1683872-1682655 (Counterclockwise)
Preceding gene: 62390470
Following gene: 62390468
Centisome position: 51.3
GC content: 57.8
Gene sequence:
>1218_bases ATGGCTGTTAAGACCCTCAAGGACTTGCTCGACGAAGGCGTAGACGGACGCCACGTCATCGTTCGATCTGACTTCAATGT TCCCCTCAACGATGACCGCGAGATCACCGATAAGGGCCGAATCATTGCCTCCCTACCAACCCTTAAAGCACTGAGCGAAG GTGGCGCAAAGGTCATCGTCATGGCTCACCTTGGCCGCCCAAAGGGCGAGGTCAACGAGAAGTACTCCCTCGCACCTGTC GCTGAGGCACTCTCCGATGAGCTTGGCCAGTACGTTGCACTTGCCGCAGACGTTGTTGGCGAAGACGCACACGAGCGCGC AAACGGCCTGACCGAGGGCGACATCCTGCTCCTGGAGAACGTGCGCTTCGACCCACGCGAAACCTCCAAGGACGAGGCAG AGCGCACCGCTTTCGCTCAGGAGCTCGCAGCTCTTGCAGCAGACAACGGCGCATTCGTTTCTGACGGCTTCGGTGTTGTC CACCGCGCACAGACCTCCGTCTACGACATTGCAAAGTTGCTGCCACACTACGCTGGCGGACTGGTAGAGACCGAGATTTC CGTTCTGGAAAAGATCGCAGAATCACCAGAGGCACCATACGTAGTGGTTCTCGGTGGATCCAAGGTCTCTGACAAGATCG GTGTTATTGAGGCGCTGGCTGCCAAGGCTGACAAGATCATCGTCGGTGGCGGCATGTGCTACACCTTCCTCGCAGCTCAG GGACACAACGTTCAGCAGTCCCTCCTGCAGGAAGAAATGAAGGCTACCTGCACCGACCTGCTCGCACGCTTCGGTGACAA GATCGTTCTCCCAGTTGACCTGGTTGCAGCATCCGAATTTAACAAGGACGCAGAGAAGCAGATCGTTGACCTGGACTCCA TCCCAGAAGGCTGGATGTCTCTTGACATCGGACCAGAGTCCGTCAAGAACTTCGGTGAGGTTCTCAGCACCGCTAAGACC ATCTTCTGGAACGGCCCAATGGGCGTGTTCGAGTTCGCAGCATTCTCTGAAGGCACCCGCGGCATCGCCCAGGCCATCAT CGATGCAACTGCAGGCAACGACGCATTCTCCGTTGTTGGCGGTGGCGACTCCGCAGCATCCGTTCGCGTGCTCGGCCTGA ACGAAGACGGCTTCTCCCACATCTCCACCGGTGGTGGCGCATCCCTCGAGTACCTTGAAGGCAAGGAACTCCCAGGCGTT GCAATTCTCGCTCAGTAA
Upstream 100 bases:
>100_bases ATACCGGTGCCAGCGCCACACAATGTGTGGCAATCTGGGACAGTGCATCACATTGCACCAGAAGAATTTTTTAAACAATC AAATCTCCAAGGAGTACGGC
Downstream 100 bases:
>100_bases ATCCGACACGGCCCTTTGTTAGAAAACAAAACATAAAGGGCCACCGGGAAACTTTTTTAAGAAAGGTGTGTTTCACACAT GGCACGTAAGCCACTTATCG
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MAVKTLKDLLDEGVDGRHVIVRSDFNVPLNDDREITDKGRIIASLPTLKALSEGGAKVIVMAHLGRPKGEVNEKYSLAPV AEALSDELGQYVALAADVVGEDAHERANGLTEGDILLLENVRFDPRETSKDEAERTAFAQELAALAADNGAFVSDGFGVV HRAQTSVYDIAKLLPHYAGGLVETEISVLEKIAESPEAPYVVVLGGSKVSDKIGVIEALAAKADKIIVGGGMCYTFLAAQ GHNVQQSLLQEEMKATCTDLLARFGDKIVLPVDLVAASEFNKDAEKQIVDLDSIPEGWMSLDIGPESVKNFGEVLSTAKT IFWNGPMGVFEFAAFSEGTRGIAQAIIDATAGNDAFSVVGGGDSAASVRVLGLNEDGFSHISTGGGASLEYLEGKELPGV AILAQ
Sequences:
>Translated_405_residues MAVKTLKDLLDEGVDGRHVIVRSDFNVPLNDDREITDKGRIIASLPTLKALSEGGAKVIVMAHLGRPKGEVNEKYSLAPV AEALSDELGQYVALAADVVGEDAHERANGLTEGDILLLENVRFDPRETSKDEAERTAFAQELAALAADNGAFVSDGFGVV HRAQTSVYDIAKLLPHYAGGLVETEISVLEKIAESPEAPYVVVLGGSKVSDKIGVIEALAAKADKIIVGGGMCYTFLAAQ GHNVQQSLLQEEMKATCTDLLARFGDKIVLPVDLVAASEFNKDAEKQIVDLDSIPEGWMSLDIGPESVKNFGEVLSTAKT IFWNGPMGVFEFAAFSEGTRGIAQAIIDATAGNDAFSVVGGGDSAASVRVLGLNEDGFSHISTGGGASLEYLEGKELPGV AILAQ >Mature_404_residues AVKTLKDLLDEGVDGRHVIVRSDFNVPLNDDREITDKGRIIASLPTLKALSEGGAKVIVMAHLGRPKGEVNEKYSLAPVA EALSDELGQYVALAADVVGEDAHERANGLTEGDILLLENVRFDPRETSKDEAERTAFAQELAALAADNGAFVSDGFGVVH RAQTSVYDIAKLLPHYAGGLVETEISVLEKIAESPEAPYVVVLGGSKVSDKIGVIEALAAKADKIIVGGGMCYTFLAAQG HNVQQSLLQEEMKATCTDLLARFGDKIVLPVDLVAASEFNKDAEKQIVDLDSIPEGWMSLDIGPESVKNFGEVLSTAKTI FWNGPMGVFEFAAFSEGTRGIAQAIIDATAGNDAFSVVGGGDSAASVRVLGLNEDGFSHISTGGGASLEYLEGKELPGVA ILAQ
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=414, Percent_Identity=41.304347826087, Blast_Score=288, Evalue=5e-78, Organism=Homo sapiens, GI31543397, Length=414, Percent_Identity=41.304347826087, Blast_Score=283, Evalue=3e-76, Organism=Escherichia coli, GI1789294, Length=408, Percent_Identity=41.9117647058824, Blast_Score=278, Evalue=5e-76, Organism=Caenorhabditis elegans, GI17508823, Length=406, Percent_Identity=41.6256157635468, Blast_Score=283, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6319857, Length=426, Percent_Identity=40.1408450704225, Blast_Score=286, Evalue=4e-78, Organism=Drosophila melanogaster, GI24581203, Length=419, Percent_Identity=39.3794749403341, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI17136394, Length=405, Percent_Identity=39.7530864197531, Blast_Score=256, Evalue=2e-68,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42698; Mature: 42566
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKTLKDLLDEGVDGRHVIVRSDFNVPLNDDREITDKGRIIASLPTLKALSEGGAKVIV CCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCEEEE MAHLGRPKGEVNEKYSLAPVAEALSDELGQYVALAADVVGEDAHERANGLTEGDILLLEN EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEC VRFDPRETSKDEAERTAFAQELAALAADNGAFVSDGFGVVHRAQTSVYDIAKLLPHYAGG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCC LVETEISVLEKIAESPEAPYVVVLGGSKVSDKIGVIEALAAKADKIIVGGGMCYTFLAAQ HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHC GHNVQQSLLQEEMKATCTDLLARFGDKIVLPVDLVAASEFNKDAEKQIVDLDSIPEGWMS CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCEE LDIGPESVKNFGEVLSTAKTIFWNGPMGVFEFAAFSEGTRGIAQAIIDATAGNDAFSVVG ECCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEE GGDSAASVRVLGLNEDGFSHISTGGGASLEYLEGKELPGVAILAQ CCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEC >Mature Secondary Structure AVKTLKDLLDEGVDGRHVIVRSDFNVPLNDDREITDKGRIIASLPTLKALSEGGAKVIV CHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCEEEE MAHLGRPKGEVNEKYSLAPVAEALSDELGQYVALAADVVGEDAHERANGLTEGDILLLEN EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEC VRFDPRETSKDEAERTAFAQELAALAADNGAFVSDGFGVVHRAQTSVYDIAKLLPHYAGG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCC LVETEISVLEKIAESPEAPYVVVLGGSKVSDKIGVIEALAAKADKIIVGGGMCYTFLAAQ HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHC GHNVQQSLLQEEMKATCTDLLARFGDKIVLPVDLVAASEFNKDAEKQIVDLDSIPEGWMS CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCEE LDIGPESVKNFGEVLSTAKTIFWNGPMGVFEFAAFSEGTRGIAQAIIDATAGNDAFSVVG ECCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEE GGDSAASVRVLGLNEDGFSHISTGGGASLEYLEGKELPGVAILAQ CCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA